RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 ZNF705AQ6ZN79 300 aaPredicted RBP9.2□□□□□ -0.94
PRPF40A-203ENST00000448428 CHAC2Q8WUX2 184 aa9.2□□□□□ -0.94
PRPF40A-203ENST00000448428 PPP1R1CQ8WVI7 109 aa9.2□□□□□ -0.94
PRPF40A-203ENST00000448428 MFFQ9GZY8 342 aa9.2□□□□□ -0.94
PRPF40A-203ENST00000448428 SLC25A31Q9H0C2 315 aa9.2□□□□□ -0.94
PRPF40A-203ENST00000448428 SLC39A9Q9NUM3 307 aa9.2□□□□□ -0.94
PRPF40A-203ENST00000448428 TRAV5A0A0B4J249 113 aa9.19□□□□□ -0.94
PRPF40A-203ENST00000448428 BPIFA4PQ86YQ2 179 aa9.19□□□□□ -0.94
PRPF40A-203ENST00000448428 ZNF738Q8NE65 137 aa9.19□□□□□ -0.94
PRPF40A-203ENST00000448428 OR5C1Q8NGR4 320 aa9.19□□□□□ -0.94
PRPF40A-203ENST00000448428 LRRC20Q8TCA0 184 aa9.19□□□□□ -0.94
PRPF40A-203ENST00000448428 HRH4Q9H3N8 390 aa9.19□□□□□ -0.94
PRPF40A-203ENST00000448428 KLK5Q9Y337 293 aaPredicted RBP9.19□□□□□ -0.94
PRPF40A-203ENST00000448428 PXMP4Q9Y6I8 212 aa9.19□□□□□ -0.94
PRPF40A-203ENST00000448428 RYR3Q15413 4870 aa9.19□□□□□ -0.94
PRPF40A-203ENST00000448428 IGHV3OR16-12A0A075B7B8 117 aa9.18□□□□□ -0.94
PRPF40A-203ENST00000448428 ZNF705FA8MVS1 300 aaPredicted RBP9.18□□□□□ -0.94
PRPF40A-203ENST00000448428 DUSP14O95147 198 aaKnown RBP9.18□□□□□ -0.94
PRPF40A-203ENST00000448428 MPC2O95563 127 aa9.18□□□□□ -0.94
PRPF40A-203ENST00000448428 PRB4P10163 310 aaPredicted RBP9.18□□□□□ -0.94
PRPF40A-203ENST00000448428 CNN1P51911 297 aaKnown RBP9.18□□□□□ -0.94
PRPF40A-203ENST00000448428 B2MP61769 119 aa9.18□□□□□ -0.94
PRPF40A-203ENST00000448428 PSG3Q16557 428 aa9.18□□□□□ -0.94
PRPF40A-203ENST00000448428 C1orf158Q8N1D5 194 aa9.18□□□□□ -0.94
PRPF40A-203ENST00000448428 OR1L4Q8NGR5 311 aa9.18□□□□□ -0.94
PRPF40A-203ENST00000448428 NEU1Q99519 415 aa9.18□□□□□ -0.94
PRPF40A-203ENST00000448428 ZNF331Q9NQX6 463 aaPredicted RBP9.18□□□□□ -0.94
PRPF40A-203ENST00000448428 H3BQ15 152 aa9.17□□□□□ -0.94
PRPF40A-203ENST00000448428 H3BTX0 84 aa9.17□□□□□ -0.94
PRPF40A-203ENST00000448428 MPDU1O75352 247 aa9.17□□□□□ -0.94
PRPF40A-203ENST00000448428 IGLC2P0DOY2 106 aa9.17□□□□□ -0.94
PRPF40A-203ENST00000448428 CLINT1Q14677 625 aa9.17□□□□□ -0.94
PRPF40A-203ENST00000448428 LCN15Q6UWW0 184 aa9.17□□□□□ -0.94
PRPF40A-203ENST00000448428 OR11H7Q8NGC8 314 aa9.17□□□□□ -0.94
PRPF40A-203ENST00000448428 THAP6Q8TBB0 222 aa9.17□□□□□ -0.94
PRPF40A-203ENST00000448428 PFDN5Q99471 154 aa9.17□□□□□ -0.94
PRPF40A-203ENST00000448428 NPCDR1Q9BY65 106 aa9.17□□□□□ -0.94
PRPF40A-203ENST00000448428 ALG5Q9Y673 324 aa9.17□□□□□ -0.94
PRPF40A-203ENST00000448428 SMIM9A6NGZ8 99 aa9.16□□□□□ -0.94
PRPF40A-203ENST00000448428 SLC17A3O00476 420 aa9.16□□□□□ -0.94
PRPF40A-203ENST00000448428 CXCL2P19875 107 aa9.16□□□□□ -0.94
PRPF40A-203ENST00000448428 OR8A1Q8NGG7 326 aa9.16□□□□□ -0.94
PRPF40A-203ENST00000448428 RPUSD4Q96CM3 377 aaKnown RBP9.16□□□□□ -0.94
PRPF40A-203ENST00000448428 SAT2Q96F10 170 aaPredicted RBP9.16□□□□□ -0.94
PRPF40A-203ENST00000448428 SLC50A1Q9BRV3 221 aa9.16□□□□□ -0.94
PRPF40A-203ENST00000448428 CELA1Q9UNI1 258 aa9.16□□□□□ -0.94
PRPF40A-203ENST00000448428 GOLT1BQ9Y3E0 138 aa9.16□□□□□ -0.94
PRPF40A-203ENST00000448428 M0R2Z0 102 aa9.15□□□□□ -0.94
PRPF40A-203ENST00000448428 CRXO43186 299 aaPredicted RBP9.15□□□□□ -0.94
PRPF40A-203ENST00000448428 PTTG1O95997 202 aa9.15□□□□□ -0.94
PRPF40A-203ENST00000448428 HIST1H1AQ02539 215 aaPredicted RBP9.15□□□□□ -0.94
PRPF40A-203ENST00000448428 SPINK13Q1W4C9 94 aa9.15□□□□□ -0.94
PRPF40A-203ENST00000448428 GCSAMLQ5JQS6 135 aa9.15□□□□□ -0.94
PRPF40A-203ENST00000448428 LINC00476Q8WZB0 136 aa9.15□□□□□ -0.94
PRPF40A-203ENST00000448428 IGF2BP2-AS1Q96M15 143 aa9.15□□□□□ -0.94
PRPF40A-203ENST00000448428 WDR61Q9GZS3 305 aaKnown RBP9.15□□□□□ -0.94
PRPF40A-203ENST00000448428 ZNF586Q9NXT0 402 aa9.15□□□□□ -0.94
PRPF40A-203ENST00000448428 AMBPP02760 352 aa9.14□□□□□ -0.95
PRPF40A-203ENST00000448428 PET100P0DJ07 73 aa9.14□□□□□ -0.95
PRPF40A-203ENST00000448428 RPL12P30050 165 aaKnown RBP9.14□□□□□ -0.95
PRPF40A-203ENST00000448428 EMP1P54849 157 aa9.14□□□□□ -0.95
PRPF40A-203ENST00000448428 RHOBP62745 196 aa9.14□□□□□ -0.95
PRPF40A-203ENST00000448428 GUK1Q16774 197 aa9.14□□□□□ -0.95
PRPF40A-203ENST00000448428 C12orf74Q32Q52 190 aa9.14□□□□□ -0.95
PRPF40A-203ENST00000448428 Q6ZTC4 211 aa9.14□□□□□ -0.95
PRPF40A-203ENST00000448428 ZNF767PQ75MW2 155 aa9.14□□□□□ -0.95
PRPF40A-203ENST00000448428 C2CD4CQ8TF44 421 aa9.14□□□□□ -0.95
PRPF40A-203ENST00000448428 MBD2Q9UBB5 411 aa9.14□□□□□ -0.95
PRPF40A-203ENST00000448428 HSPB11Q9Y547 144 aa9.14□□□□□ -0.95
PRPF40A-203ENST00000448428 RFNGQ9Y644 331 aa9.14□□□□□ -0.95
PRPF40A-203ENST00000448428 DYNC2H1Q8NCM8 4307 aaKnown RBP9.14□□□□□ -0.95
PRPF40A-203ENST00000448428 C11orf94C9JXX5 98 aa9.13□□□□□ -0.95
PRPF40A-203ENST00000448428 PRAC2D3DTV9 90 aa9.13□□□□□ -0.95
PRPF40A-203ENST00000448428 BOLA2-SMG1P6H3BVE0 249 aa9.13□□□□□ -0.95
PRPF40A-203ENST00000448428 LY6G6CO95867 125 aa9.13□□□□□ -0.95
PRPF40A-203ENST00000448428 LYSTQ99698 3801 aa9.13□□□□□ -0.95
PRPF40A-203ENST00000448428 ATP5SQ99766 215 aa9.13□□□□□ -0.95
PRPF40A-203ENST00000448428 TMEM14CQ9P0S9 112 aa9.13□□□□□ -0.95
PRPF40A-203ENST00000448428 TRAV12-2A0A075B6T6 113 aa9.12□□□□□ -0.95
PRPF40A-203ENST00000448428 TRAV10A0A0B4J240 114 aa9.12□□□□□ -0.95
PRPF40A-203ENST00000448428 TMEM189A5PLL7 270 aa9.12□□□□□ -0.95
PRPF40A-203ENST00000448428 IGLL5B9A064 214 aa9.12□□□□□ -0.95
PRPF40A-203ENST00000448428 HBE1P02100 147 aa9.12□□□□□ -0.95
PRPF40A-203ENST00000448428 PRM2P04554 102 aa9.12□□□□□ -0.95
PRPF40A-203ENST00000448428 PYYP10082 97 aa9.12□□□□□ -0.95
PRPF40A-203ENST00000448428 FCN2Q15485 313 aa9.12□□□□□ -0.95
PRPF40A-203ENST00000448428 RRN3P1Q2M238 152 aa9.12□□□□□ -0.95
PRPF40A-203ENST00000448428 MIR17HGQ75NE6 70 aa9.12□□□□□ -0.95
PRPF40A-203ENST00000448428 BAP18Q8IXM2 172 aa9.12□□□□□ -0.95
PRPF40A-203ENST00000448428 FAM167A-AS1Q96KT0 104 aa9.12□□□□□ -0.95
PRPF40A-203ENST00000448428 TMEM208Q9BTX3 173 aa9.12□□□□□ -0.95
PRPF40A-203ENST00000448428 SLC25A2Q9BXI2 301 aa9.12□□□□□ -0.95
PRPF40A-203ENST00000448428 SMIM3Q9BZL3 60 aa9.12□□□□□ -0.95
PRPF40A-203ENST00000448428 MED28Q9H204 178 aa9.12□□□□□ -0.95
PRPF40A-203ENST00000448428 PPP1R14DQ9NXH3 145 aa9.12□□□□□ -0.95
PRPF40A-203ENST00000448428 TRBV19A0A075B6N1 114 aa9.11□□□□□ -0.95
PRPF40A-203ENST00000448428 LOC102723971A0A1B0GUV8 181 aa9.11□□□□□ -0.95
PRPF40A-203ENST00000448428 C17orf112F2Z3M2 114 aa9.11□□□□□ -0.95
PRPF40A-203ENST00000448428 ZNF253O75346 499 aa9.11□□□□□ -0.95
PRPF40A-203ENST00000448428 NDUFB4O95168 129 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms