RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 INSP01308 110 aa14.4□□□□□ -0.1
LRCH3-208ENST00000443727 CXCL3P19876 107 aa14.4□□□□□ -0.1
LRCH3-208ENST00000443727 S100A11P31949 105 aa14.4□□□□□ -0.1
LRCH3-208ENST00000443727 RHOBP62745 196 aa14.4□□□□□ -0.1
LRCH3-208ENST00000443727 HBG1P69891 147 aa14.4□□□□□ -0.1
LRCH3-208ENST00000443727 HBG2P69892 147 aa14.4□□□□□ -0.1
LRCH3-208ENST00000443727 PSG3Q16557 428 aa14.4□□□□□ -0.1
LRCH3-208ENST00000443727 SPINK13Q1W4C9 94 aa14.4□□□□□ -0.1
LRCH3-208ENST00000443727 RRN3P1Q2M238 152 aa14.4□□□□□ -0.1
LRCH3-208ENST00000443727 AMTNQ6UX39 209 aa14.4□□□□□ -0.1
LRCH3-208ENST00000443727 BPIFA4PQ86YQ2 179 aa14.4□□□□□ -0.1
LRCH3-208ENST00000443727 C1orf158Q8N1D5 194 aa14.4□□□□□ -0.1
LRCH3-208ENST00000443727 OR11H7Q8NGC8 314 aa14.4□□□□□ -0.1
LRCH3-208ENST00000443727 RNF126Q9BV68 326 aa14.4□□□□□ -0.1
LRCH3-208ENST00000443727 C11orf1Q9H5F2 150 aa14.4□□□□□ -0.1
LRCH3-208ENST00000443727 PTTG2Q9NZH5 202 aa14.4□□□□□ -0.1
LRCH3-208ENST00000443727 TEX48A0A1B0GUV7 120 aa14.39□□□□□ -0.11
LRCH3-208ENST00000443727 LOC102723971A0A1B0GUV8 181 aa14.39□□□□□ -0.11
LRCH3-208ENST00000443727 M0R2Z0 102 aa14.39□□□□□ -0.11
LRCH3-208ENST00000443727 SNRPCP09234 159 aaKnown RBP14.39□□□□□ -0.11
LRCH3-208ENST00000443727 BAXQ07812 192 aa14.39□□□□□ -0.11
LRCH3-208ENST00000443727 LCN15Q6UWW0 184 aa14.39□□□□□ -0.11
LRCH3-208ENST00000443727 DNAJC4Q9NNZ3 241 aa14.39□□□□□ -0.11
LRCH3-208ENST00000443727 EPPK1P58107 5090 aaKnown RBP14.39□□□□□ -0.11
LRCH3-208ENST00000443727 UBE2L5PA0A1B0GUS4 154 aa14.38□□□□□ -0.11
LRCH3-208ENST00000443727 IGSF23A1L1A6 192 aa14.38□□□□□ -0.11
LRCH3-208ENST00000443727 CXCL2P19875 107 aa14.38□□□□□ -0.11
LRCH3-208ENST00000443727 IL15RAQ13261 267 aa14.38□□□□□ -0.11
LRCH3-208ENST00000443727 MIC13Q5XKP0 118 aa14.38□□□□□ -0.11
LRCH3-208ENST00000443727 TMEM252Q8N6L7 170 aa14.38□□□□□ -0.11
LRCH3-208ENST00000443727 OR8A1Q8NGG7 326 aa14.38□□□□□ -0.11
LRCH3-208ENST00000443727 TMEM37Q8WXS4 190 aa14.38□□□□□ -0.11
LRCH3-208ENST00000443727 RPUSD4Q96CM3 377 aaKnown RBP14.38□□□□□ -0.11
LRCH3-208ENST00000443727 WDR83OSQ9Y284 106 aa14.38□□□□□ -0.11
LRCH3-208ENST00000443727 BOLA2-SMG1P6H3BVE0 249 aa14.37□□□□□ -0.11
LRCH3-208ENST00000443727 MRPS12O15235 138 aaKnown RBP14.37□□□□□ -0.11
LRCH3-208ENST00000443727 FAM222AQ5U5X8 452 aa14.37□□□□□ -0.11
LRCH3-208ENST00000443727 OR1L4Q8NGR5 311 aa14.37□□□□□ -0.11
LRCH3-208ENST00000443727 SLC50A1Q9BRV3 221 aa14.37□□□□□ -0.11
LRCH3-208ENST00000443727 DKK2Q9UBU2 259 aa14.37□□□□□ -0.11
LRCH3-208ENST00000443727 YTHDF2Q9Y5A9 579 aaKnown RBP14.37□□□□□ -0.11
LRCH3-208ENST00000443727 RLN2P04090 185 aa14.36□□□□□ -0.11
LRCH3-208ENST00000443727 FGF7P21781 194 aa14.36□□□□□ -0.11
LRCH3-208ENST00000443727 OPCMLQ14982 345 aa14.36□□□□□ -0.11
LRCH3-208ENST00000443727 ATP6V1FQ16864 119 aa14.36□□□□□ -0.11
LRCH3-208ENST00000443727 VWC2Q2TAL6 325 aa14.36□□□□□ -0.11
LRCH3-208ENST00000443727 BAP18Q8IXM2 172 aa14.36□□□□□ -0.11
LRCH3-208ENST00000443727 PFDN5Q99471 154 aa14.36□□□□□ -0.11
LRCH3-208ENST00000443727 NIPSNAP3BQ9BS92 247 aa14.36□□□□□ -0.11
LRCH3-208ENST00000443727 NDUFAF3Q9BU61 184 aa14.36□□□□□ -0.11
LRCH3-208ENST00000443727 ZNF331Q9NQX6 463 aaPredicted RBP14.36□□□□□ -0.11
LRCH3-208ENST00000443727 TRAV12-2A0A075B6T6 113 aa14.35□□□□□ -0.11
LRCH3-208ENST00000443727 INMT-MINDY4F8WBC2 141 aa14.35□□□□□ -0.11
LRCH3-208ENST00000443727 H3BTX0 84 aa14.35□□□□□ -0.11
LRCH3-208ENST00000443727 PRAF2O60831 178 aa14.35□□□□□ -0.11
LRCH3-208ENST00000443727 SIX6O95475 246 aa14.35□□□□□ -0.11
LRCH3-208ENST00000443727 PRB4P10163 310 aaPredicted RBP14.35□□□□□ -0.11
LRCH3-208ENST00000443727 B2MP61769 119 aa14.35□□□□□ -0.11
LRCH3-208ENST00000443727 PRR20EP86478 221 aa14.35□□□□□ -0.11
LRCH3-208ENST00000443727 PRR20CP86479 221 aa14.35□□□□□ -0.11
LRCH3-208ENST00000443727 PRR20DP86480 221 aa14.35□□□□□ -0.11
LRCH3-208ENST00000443727 PRR20BP86481 221 aa14.35□□□□□ -0.11
LRCH3-208ENST00000443727 PRR20AP86496 221 aa14.35□□□□□ -0.11
LRCH3-208ENST00000443727 MORN5Q5VZ52 161 aa14.35□□□□□ -0.11
LRCH3-208ENST00000443727 SLC39A9Q9NUM3 307 aa14.35□□□□□ -0.11
LRCH3-208ENST00000443727 ZNF705GA8MUZ8 300 aaPredicted RBP14.34□□□□□ -0.11
LRCH3-208ENST00000443727 CRXO43186 299 aaPredicted RBP14.34□□□□□ -0.11
LRCH3-208ENST00000443727 HTN3P15516 51 aa14.34□□□□□ -0.11
LRCH3-208ENST00000443727 RPL29P47914 159 aaKnown RBP14.34□□□□□ -0.11
LRCH3-208ENST00000443727 IFITM3Q01628 133 aa14.34□□□□□ -0.11
LRCH3-208ENST00000443727 PXMP4Q9Y6I8 212 aa14.34□□□□□ -0.11
LRCH3-208ENST00000443727 TRAV5A0A0B4J249 113 aa14.33□□□□□ -0.12
LRCH3-208ENST00000443727 DEFA1P59665 94 aa14.33□□□□□ -0.12
LRCH3-208ENST00000443727 DEFA3P59666 94 aa14.33□□□□□ -0.12
LRCH3-208ENST00000443727 LRRC37A5PQ49AS3 106 aa14.33□□□□□ -0.12
LRCH3-208ENST00000443727 LINC01587Q99440 93 aa14.33□□□□□ -0.12
LRCH3-208ENST00000443727 SLC25A31Q9H0C2 315 aa14.33□□□□□ -0.12
LRCH3-208ENST00000443727 PLA2G2EQ9NZK7 142 aa14.33□□□□□ -0.12
LRCH3-208ENST00000443727 E5RGE8 158 aa14.32□□□□□ -0.12
LRCH3-208ENST00000443727 SLC17A3O00476 420 aa14.32□□□□□ -0.12
LRCH3-208ENST00000443727 IGLC2P0DOY2 106 aa14.32□□□□□ -0.12
LRCH3-208ENST00000443727 DAD1P61803 113 aa14.32□□□□□ -0.12
LRCH3-208ENST00000443727 CYCSP99999 105 aaKnown RBP14.32□□□□□ -0.12
LRCH3-208ENST00000443727 GUK1Q16774 197 aa14.32□□□□□ -0.12
LRCH3-208ENST00000443727 OR10J6PQ8NGY7 276 aa14.32□□□□□ -0.12
LRCH3-208ENST00000443727 NMES1Q9C002 83 aa14.32□□□□□ -0.12
LRCH3-208ENST00000443727 KMT2AQ03164 3969 aa14.32□□□□□ -0.12
LRCH3-208ENST00000443727 H3BQ15 152 aa14.31□□□□□ -0.12
LRCH3-208ENST00000443727 MPDU1O75352 247 aa14.31□□□□□ -0.12
LRCH3-208ENST00000443727 PRM2P04554 102 aa14.31□□□□□ -0.12
LRCH3-208ENST00000443727 NHLH2Q02577 135 aa14.31□□□□□ -0.12
LRCH3-208ENST00000443727 SSNA1O43805 119 aa14.3□□□□□ -0.12
LRCH3-208ENST00000443727 HTN1P15515 57 aa14.3□□□□□ -0.12
LRCH3-208ENST00000443727 CDKN1BP46527 198 aa14.3□□□□□ -0.12
LRCH3-208ENST00000443727 OXA1LQ15070 435 aa14.3□□□□□ -0.12
LRCH3-208ENST00000443727 TMEM256Q8N2U0 113 aa14.3□□□□□ -0.12
LRCH3-208ENST00000443727 OR5C1Q8NGR4 320 aa14.3□□□□□ -0.12
LRCH3-208ENST00000443727 CHAC2Q8WUX2 184 aa14.3□□□□□ -0.12
LRCH3-208ENST00000443727 P0DMU3 169 aa14.29□□□□□ -0.12
LRCH3-208ENST00000443727 FAM231AP0DMU4 169 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms