RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 IGHV3-74A0A0B4J1X5 117 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 A0A0J9YXV3 536 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 CENPVL3A0A0U1RRI6 287 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 TMEM72A0PK05 275 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 C7orf66A4D0T2 115 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 FAM183AA6NL82 134 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 TMEM212A6NML5 194 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 IFITM5A6NNB3 132 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 GABARAPH6UMI1 98 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 J3QLW9 94 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 UPK2O00526 184 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 TP53I11O14683 189 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 RGS5O15539 181 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 ENSAO43768 121 aaKnown RBP1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 ORC5O43913 435 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 EIF1BO60739 113 aaKnown RBP1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 IGLV3-1P01715 115 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 IL5P05113 134 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 CST2P09228 141 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 NBEAP1P0C6P0 100 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 OR5H8P0DN80 308 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 ATF1P18846 271 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 RAB3BP20337 219 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 CCL1P22362 96 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 G0S2P27469 103 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 ERP29P30040 261 aaKnown RBP1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 GRPRP30550 384 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 TGFBR1P36897 503 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 TALDO1P37837 337 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 SULT1A1P50225 295 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 SULT1A2P50226 295 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 RAB7AP51149 207 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 RND2P52198 227 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 FGF8P55075 233 aaPredicted RBP1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 SYNJ2BPP57105 145 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 RAB5BP61020 215 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 ZNF117Q03924 483 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 FMODQ06828 376 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 RPL18Q07020 188 aaKnown RBP1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 PLCXD2Q0VAA5 305 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 EDDM3AQ14507 147 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 CDK10Q15131 360 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 KCNJ8Q15842 424 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 NDUFA5Q16718 116 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 DEFB136Q30KP8 78 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 PLPPR5Q32ZL2 321 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 Q499Y3 187 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 KLHL12Q53G59 568 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 MESTQ5EB52 335 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 C10orf128Q5T292 105 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 TMEM244Q5VVB8 128 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 C1orf140Q5VVS0 124 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 LCN12Q6JVE5 192 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 SFXN4Q6P4A7 337 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 ARL9Q6T311 187 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 PLET1Q6UQ28 207 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 C10orf99Q6UWK7 81 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 TEX43Q6ZNM6 134 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 TMPPEQ6ZT21 453 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 SMIM15Q7Z3B0 74 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 MRPL55Q7Z7F7 128 aaKnown RBP1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 MARCH3Q86UD3 253 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 SLC51BQ86UW2 128 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 TCTE3Q8IZS6 198 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 C11orf72Q8NBR9 251 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 OR2M3Q8NG83 312 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 OR4K13Q8NH42 304 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 OR5AK2Q8NH90 309 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 ZNF563Q8TA94 476 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 FNDC9Q8TBE3 224 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 NEK7Q8TDX7 302 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 Q8WTZ3 238 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 SMIM4Q8WVI0 70 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 ASB13Q8WXK3 278 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 SLC7A6Q92536 515 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 RGP1Q92546 391 aaPredicted RBP1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 TSLPQ969D9 159 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 TMEM203Q969S6 136 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 FAM3DQ96BQ1 224 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 S100A16Q96FQ6 103 aaKnown RBP1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 SLC25A44Q96H78 314 aaPredicted RBP1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 DIRAS2Q96HU8 199 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 DERL3Q96Q80 235 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 TSPAN32Q96QS1 320 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 NMNAT3Q96T66 252 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 NDFIP1Q9BT67 221 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 FAAP24Q9BTP7 215 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 EMC6Q9BV81 110 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 MS4A6AQ9H2W1 248 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 PROK2Q9HC23 129 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 INIPQ9NRY2 104 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 FAM206AQ9NX38 181 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 COMMD3Q9UBI1 195 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 MTFP1Q9UDX5 166 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 ZNF391Q9UJN7 358 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 PAIP2BQ9ULR5 123 aaKnown RBP1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 HHLA2Q9UM44 414 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 ST3GAL6Q9Y274 331 aa1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 LSM5Q9Y4Y9 91 aaKnown RBP1.25□□□□□ -2.21
HMGB1P18-201ENST00000438801 NUBP2Q9Y5Y2 271 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms