RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 TEX48A0A1B0GUV7 120 aa12.64□□□□□ -0.39
NUP50-208ENST00000430547 A8MTW9 85 aa12.64□□□□□ -0.39
NUP50-208ENST00000430547 PRAF2O60831 178 aa12.64□□□□□ -0.39
NUP50-208ENST00000430547 INSP01308 110 aa12.64□□□□□ -0.39
NUP50-208ENST00000430547 CXCL2P19875 107 aa12.64□□□□□ -0.39
NUP50-208ENST00000430547 CXCL3P19876 107 aa12.64□□□□□ -0.39
NUP50-208ENST00000430547 LCN15Q6UWW0 184 aa12.64□□□□□ -0.39
NUP50-208ENST00000430547 IGF2BP2-AS1Q96M15 143 aa12.64□□□□□ -0.39
NUP50-208ENST00000430547 WDR83OSQ9Y284 106 aa12.64□□□□□ -0.39
NUP50-208ENST00000430547 DEFB131BA0A096LNP1 70 aa12.63□□□□□ -0.39
NUP50-208ENST00000430547 IGSF23A1L1A6 192 aa12.63□□□□□ -0.39
NUP50-208ENST00000430547 RLN2P04090 185 aa12.63□□□□□ -0.39
NUP50-208ENST00000430547 RHOBP62745 196 aa12.63□□□□□ -0.39
NUP50-208ENST00000430547 HIST1H1AQ02539 215 aaPredicted RBP12.63□□□□□ -0.39
NUP50-208ENST00000430547 PSG3Q16557 428 aa12.63□□□□□ -0.39
NUP50-208ENST00000430547 SPINK13Q1W4C9 94 aa12.63□□□□□ -0.39
NUP50-208ENST00000430547 RRN3P1Q2M238 152 aa12.63□□□□□ -0.39
NUP50-208ENST00000430547 C12orf74Q32Q52 190 aa12.63□□□□□ -0.39
NUP50-208ENST00000430547 AMTNQ6UX39 209 aa12.63□□□□□ -0.39
NUP50-208ENST00000430547 TMEM252Q8N6L7 170 aa12.63□□□□□ -0.39
NUP50-208ENST00000430547 OR11H7Q8NGC8 314 aa12.63□□□□□ -0.39
NUP50-208ENST00000430547 OR1L4Q8NGR5 311 aa12.63□□□□□ -0.39
NUP50-208ENST00000430547 PFDN5Q99471 154 aa12.63□□□□□ -0.39
NUP50-208ENST00000430547 SLC50A1Q9BRV3 221 aa12.63□□□□□ -0.39
NUP50-208ENST00000430547 IGHV4-4A0A075B6R2 117 aa12.62□□□□□ -0.39
NUP50-208ENST00000430547 LOC102723971A0A1B0GUV8 181 aa12.62□□□□□ -0.39
NUP50-208ENST00000430547 M0R2Z0 102 aa12.62□□□□□ -0.39
NUP50-208ENST00000430547 DEFA1P59665 94 aa12.62□□□□□ -0.39
NUP50-208ENST00000430547 DEFA3P59666 94 aa12.62□□□□□ -0.39
NUP50-208ENST00000430547 IL15RAQ13261 267 aa12.62□□□□□ -0.39
NUP50-208ENST00000430547 ATP6V1FQ16864 119 aa12.62□□□□□ -0.39
NUP50-208ENST00000430547 VWC2Q2TAL6 325 aa12.62□□□□□ -0.39
NUP50-208ENST00000430547 MIC13Q5XKP0 118 aa12.62□□□□□ -0.39
NUP50-208ENST00000430547 C1orf158Q8N1D5 194 aa12.62□□□□□ -0.39
NUP50-208ENST00000430547 TMEM37Q8WXS4 190 aa12.62□□□□□ -0.39
NUP50-208ENST00000430547 DNAJC4Q9NNZ3 241 aa12.62□□□□□ -0.39
NUP50-208ENST00000430547 APLNQ9ULZ1 77 aa12.62□□□□□ -0.39
NUP50-208ENST00000430547 INMT-MINDY4F8WBC2 141 aa12.61□□□□□ -0.39
NUP50-208ENST00000430547 BOLA2-SMG1P6H3BVE0 249 aa12.61□□□□□ -0.39
NUP50-208ENST00000430547 MRPS12O15235 138 aaKnown RBP12.61□□□□□ -0.39
NUP50-208ENST00000430547 FGF7P21781 194 aa12.61□□□□□ -0.39
NUP50-208ENST00000430547 B2MP61769 119 aa12.61□□□□□ -0.39
NUP50-208ENST00000430547 OR8A1Q8NGG7 326 aa12.61□□□□□ -0.39
NUP50-208ENST00000430547 RPUSD4Q96CM3 377 aaKnown RBP12.61□□□□□ -0.39
NUP50-208ENST00000430547 RNF126Q9BV68 326 aa12.61□□□□□ -0.39
NUP50-208ENST00000430547 SIX6O95475 246 aa12.6□□□□□ -0.39
NUP50-208ENST00000430547 SNRPCP09234 159 aaKnown RBP12.6□□□□□ -0.39
NUP50-208ENST00000430547 RPL29P47914 159 aaKnown RBP12.6□□□□□ -0.39
NUP50-208ENST00000430547 PRR20EP86478 221 aa12.6□□□□□ -0.39
NUP50-208ENST00000430547 PRR20CP86479 221 aa12.6□□□□□ -0.39
NUP50-208ENST00000430547 PRR20DP86480 221 aa12.6□□□□□ -0.39
NUP50-208ENST00000430547 PRR20BP86481 221 aa12.6□□□□□ -0.39
NUP50-208ENST00000430547 PRR20AP86496 221 aa12.6□□□□□ -0.39
NUP50-208ENST00000430547 CYCSP99999 105 aaKnown RBP12.6□□□□□ -0.39
NUP50-208ENST00000430547 IFITM3Q01628 133 aa12.6□□□□□ -0.39
NUP50-208ENST00000430547 OPCMLQ14982 345 aa12.6□□□□□ -0.39
NUP50-208ENST00000430547 LRRC37A5PQ49AS3 106 aa12.6□□□□□ -0.39
NUP50-208ENST00000430547 FAM222AQ5U5X8 452 aa12.6□□□□□ -0.39
NUP50-208ENST00000430547 RPP25LQ8N5L8 163 aaKnown RBP12.6□□□□□ -0.39
NUP50-208ENST00000430547 NMES1Q9C002 83 aa12.6□□□□□ -0.39
NUP50-208ENST00000430547 SLC25A31Q9H0C2 315 aa12.6□□□□□ -0.39
NUP50-208ENST00000430547 ZNF331Q9NQX6 463 aaPredicted RBP12.6□□□□□ -0.39
NUP50-208ENST00000430547 SLC39A9Q9NUM3 307 aa12.6□□□□□ -0.39
NUP50-208ENST00000430547 E5RGE8 158 aa12.59□□□□□ -0.39
NUP50-208ENST00000430547 MPDU1O75352 247 aa12.59□□□□□ -0.39
NUP50-208ENST00000430547 MORN5Q5VZ52 161 aa12.59□□□□□ -0.39
NUP50-208ENST00000430547 BAP18Q8IXM2 172 aa12.59□□□□□ -0.39
NUP50-208ENST00000430547 NIPSNAP3BQ9BS92 247 aa12.59□□□□□ -0.39
NUP50-208ENST00000430547 BATF3Q9NR55 127 aa12.59□□□□□ -0.39
NUP50-208ENST00000430547 DKK2Q9UBU2 259 aa12.59□□□□□ -0.39
NUP50-208ENST00000430547 YTHDF2Q9Y5A9 579 aaKnown RBP12.59□□□□□ -0.39
NUP50-208ENST00000430547 PXMP4Q9Y6I8 212 aa12.59□□□□□ -0.39
NUP50-208ENST00000430547 TRAV12-2A0A075B6T6 113 aa12.58□□□□□ -0.4
NUP50-208ENST00000430547 H3BTX0 84 aa12.58□□□□□ -0.4
NUP50-208ENST00000430547 NDUFAF3Q9BU61 184 aa12.58□□□□□ -0.4
NUP50-208ENST00000430547 CRXO43186 299 aaPredicted RBP12.57□□□□□ -0.4
NUP50-208ENST00000430547 SSNA1O43805 119 aa12.57□□□□□ -0.4
NUP50-208ENST00000430547 IGLC2P0DOY2 106 aa12.57□□□□□ -0.4
NUP50-208ENST00000430547 GUK1Q16774 197 aa12.57□□□□□ -0.4
NUP50-208ENST00000430547 OR5C1Q8NGR4 320 aa12.57□□□□□ -0.4
NUP50-208ENST00000430547 OR10J6PQ8NGY7 276 aa12.57□□□□□ -0.4
NUP50-208ENST00000430547 MARVELD1Q9BSK0 173 aa12.57□□□□□ -0.4
NUP50-208ENST00000430547 EPPK1P58107 5090 aaKnown RBP12.56□□□□□ -0.4
NUP50-208ENST00000430547 TRAV5A0A0B4J249 113 aa12.56□□□□□ -0.4
NUP50-208ENST00000430547 SLC17A3O00476 420 aa12.56□□□□□ -0.4
NUP50-208ENST00000430547 PRB4P10163 310 aaPredicted RBP12.56□□□□□ -0.4
NUP50-208ENST00000430547 DAD1P61803 113 aa12.56□□□□□ -0.4
NUP50-208ENST00000430547 NHLH2Q02577 135 aa12.56□□□□□ -0.4
NUP50-208ENST00000430547 TMEM256Q8N2U0 113 aa12.56□□□□□ -0.4
NUP50-208ENST00000430547 CHAC2Q8WUX2 184 aa12.56□□□□□ -0.4
NUP50-208ENST00000430547 NPCDR1Q9BY65 106 aa12.56□□□□□ -0.4
NUP50-208ENST00000430547 ZNF705GA8MUZ8 300 aaPredicted RBP12.55□□□□□ -0.4
NUP50-208ENST00000430547 H3BQ15 152 aa12.55□□□□□ -0.4
NUP50-208ENST00000430547 PET100P0DJ07 73 aa12.55□□□□□ -0.4
NUP50-208ENST00000430547 HTN3P15516 51 aa12.55□□□□□ -0.4
NUP50-208ENST00000430547 CDKN1BP46527 198 aa12.55□□□□□ -0.4
NUP50-208ENST00000430547 THAP6Q8TBB0 222 aa12.55□□□□□ -0.4
NUP50-208ENST00000430547 LINC01587Q99440 93 aa12.55□□□□□ -0.4
NUP50-208ENST00000430547 KCNIP2Q9NS61 270 aa12.55□□□□□ -0.4
NUP50-208ENST00000430547 OR5AC2Q9NZP5 309 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms