RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 C11orf45Q8TAV5 145 aa10.76□□□□□ -0.69
RTN4-210ENST00000427710 LRRC20Q8TCA0 184 aa10.76□□□□□ -0.69
RTN4-210ENST00000427710 SLC25A31Q9H0C2 315 aa10.76□□□□□ -0.69
RTN4-210ENST00000427710 DNAJC4Q9NNZ3 241 aa10.76□□□□□ -0.69
RTN4-210ENST00000427710 SLC39A9Q9NUM3 307 aa10.76□□□□□ -0.69
RTN4-210ENST00000427710 PXMP4Q9Y6I8 212 aa10.76□□□□□ -0.69
RTN4-210ENST00000427710 VPS13DQ5THJ4 4388 aa10.76□□□□□ -0.69
RTN4-210ENST00000427710 DNAH6Q9C0G6 4158 aa10.76□□□□□ -0.69
RTN4-210ENST00000427710 KMT2AQ03164 3969 aa10.75□□□□□ -0.69
RTN4-210ENST00000427710 ELOA3CA0A087WX78 387 aaPredicted RBP10.75□□□□□ -0.69
RTN4-210ENST00000427710 A0A087X0K7 114 aa10.75□□□□□ -0.69
RTN4-210ENST00000427710 MPC2O95563 127 aa10.75□□□□□ -0.69
RTN4-210ENST00000427710 CXCL3P19876 107 aa10.75□□□□□ -0.69
RTN4-210ENST00000427710 RPL29P47914 159 aaKnown RBP10.75□□□□□ -0.69
RTN4-210ENST00000427710 PSG9Q00887 426 aa10.75□□□□□ -0.69
RTN4-210ENST00000427710 GCSAMLQ5JQS6 135 aa10.75□□□□□ -0.69
RTN4-210ENST00000427710 Q6ZRG5 221 aa10.75□□□□□ -0.69
RTN4-210ENST00000427710 PHLDA1Q8WV24 401 aaPredicted RBP10.75□□□□□ -0.69
RTN4-210ENST00000427710 MFFQ9GZY8 342 aa10.75□□□□□ -0.69
RTN4-210ENST00000427710 SLC17A3O00476 420 aa10.74□□□□□ -0.69
RTN4-210ENST00000427710 CNN1P51911 297 aaKnown RBP10.74□□□□□ -0.69
RTN4-210ENST00000427710 CEMP1Q6PRD7 247 aaPredicted RBP10.74□□□□□ -0.69
RTN4-210ENST00000427710 S100A7AQ86SG5 101 aa10.74□□□□□ -0.69
RTN4-210ENST00000427710 OR1L4Q8NGR5 311 aa10.74□□□□□ -0.69
RTN4-210ENST00000427710 C1QTNF4Q9BXJ3 329 aa10.74□□□□□ -0.69
RTN4-210ENST00000427710 NPCDR1Q9BY65 106 aa10.74□□□□□ -0.69
RTN4-210ENST00000427710 SMIM3Q9BZL3 60 aa10.74□□□□□ -0.69
RTN4-210ENST00000427710 MBD2Q9UBB5 411 aa10.74□□□□□ -0.69
RTN4-210ENST00000427710 ZNF705FA8MVS1 300 aaPredicted RBP10.73□□□□□ -0.69
RTN4-210ENST00000427710 H3BQ15 152 aa10.73□□□□□ -0.69
RTN4-210ENST00000427710 PTTG1O95997 202 aa10.73□□□□□ -0.69
RTN4-210ENST00000427710 MIFP14174 115 aa10.73□□□□□ -0.69
RTN4-210ENST00000427710 FCN2Q15485 313 aa10.73□□□□□ -0.69
RTN4-210ENST00000427710 PSG3Q16557 428 aa10.73□□□□□ -0.69
RTN4-210ENST00000427710 SPATA31B1PQ5VZV4 182 aa10.73□□□□□ -0.69
RTN4-210ENST00000427710 AMTNQ6UX39 209 aa10.73□□□□□ -0.69
RTN4-210ENST00000427710 ZNF767PQ75MW2 155 aa10.73□□□□□ -0.69
RTN4-210ENST00000427710 BPIFA4PQ86YQ2 179 aa10.73□□□□□ -0.69
RTN4-210ENST00000427710 OR11H7Q8NGC8 314 aa10.73□□□□□ -0.69
RTN4-210ENST00000427710 CELA1Q9UNI1 258 aa10.73□□□□□ -0.69
RTN4-210ENST00000427710 NUPR2A6NF83 97 aa10.72□□□□□ -0.69
RTN4-210ENST00000427710 A8MTW9 85 aa10.72□□□□□ -0.69
RTN4-210ENST00000427710 M0R2Z0 102 aa10.72□□□□□ -0.69
RTN4-210ENST00000427710 HIST1H1AQ02539 215 aaPredicted RBP10.72□□□□□ -0.69
RTN4-210ENST00000427710 SPINK13Q1W4C9 94 aa10.72□□□□□ -0.69
RTN4-210ENST00000427710 C1orf158Q8N1D5 194 aa10.72□□□□□ -0.69
RTN4-210ENST00000427710 CLUHP3Q96NS8 147 aa10.72□□□□□ -0.69
RTN4-210ENST00000427710 PFDN5Q99471 154 aa10.72□□□□□ -0.69
RTN4-210ENST00000427710 HSPB11Q9Y547 144 aa10.72□□□□□ -0.69
RTN4-210ENST00000427710 PRAC2D3DTV9 90 aa10.71□□□□□ -0.69
RTN4-210ENST00000427710 JTBO76095 146 aa10.71□□□□□ -0.69
RTN4-210ENST00000427710 PRM2P04554 102 aa10.71□□□□□ -0.69
RTN4-210ENST00000427710 IGLC2P0DOY2 106 aa10.71□□□□□ -0.69
RTN4-210ENST00000427710 RPL12P30050 165 aaKnown RBP10.71□□□□□ -0.69
RTN4-210ENST00000427710 RHOBP62745 196 aa10.71□□□□□ -0.69
RTN4-210ENST00000427710 LCN15Q6UWW0 184 aa10.71□□□□□ -0.69
RTN4-210ENST00000427710 ZNF705AQ6ZN79 300 aaPredicted RBP10.71□□□□□ -0.69
RTN4-210ENST00000427710 OR8A1Q8NGG7 326 aa10.71□□□□□ -0.69
RTN4-210ENST00000427710 CHAC2Q8WUX2 184 aa10.71□□□□□ -0.69
RTN4-210ENST00000427710 RPUSD4Q96CM3 377 aaKnown RBP10.71□□□□□ -0.69
RTN4-210ENST00000427710 WDR61Q9GZS3 305 aaKnown RBP10.71□□□□□ -0.69
RTN4-210ENST00000427710 ZNF331Q9NQX6 463 aaPredicted RBP10.71□□□□□ -0.69
RTN4-210ENST00000427710 ZNF586Q9NXT0 402 aa10.71□□□□□ -0.69
RTN4-210ENST00000427710 RFNGQ9Y644 331 aa10.71□□□□□ -0.69
RTN4-210ENST00000427710 TRAV12-2A0A075B6T6 113 aa10.7□□□□□ -0.7
RTN4-210ENST00000427710 MPDU1O75352 247 aa10.7□□□□□ -0.7
RTN4-210ENST00000427710 DUSP14O95147 198 aaKnown RBP10.7□□□□□ -0.7
RTN4-210ENST00000427710 PYYP10082 97 aa10.7□□□□□ -0.7
RTN4-210ENST00000427710 EMP1P54849 157 aa10.7□□□□□ -0.7
RTN4-210ENST00000427710 MIR17HGQ75NE6 70 aa10.7□□□□□ -0.7
RTN4-210ENST00000427710 BAP18Q8IXM2 172 aa10.7□□□□□ -0.7
RTN4-210ENST00000427710 ATP5SQ99766 215 aa10.7□□□□□ -0.7
RTN4-210ENST00000427710 MED28Q9H204 178 aa10.7□□□□□ -0.7
RTN4-210ENST00000427710 WFDC1Q9HC57 220 aa10.7□□□□□ -0.7
RTN4-210ENST00000427710 RNF24Q9Y225 148 aa10.7□□□□□ -0.7
RTN4-210ENST00000427710 CRXO43186 299 aaPredicted RBP10.69□□□□□ -0.7
RTN4-210ENST00000427710 PET100P0DJ07 73 aa10.69□□□□□ -0.7
RTN4-210ENST00000427710 CXCL2P19875 107 aa10.69□□□□□ -0.7
RTN4-210ENST00000427710 Q6ZTC4 211 aa10.69□□□□□ -0.7
RTN4-210ENST00000427710 SAT2Q96F10 170 aaPredicted RBP10.69□□□□□ -0.7
RTN4-210ENST00000427710 SLC50A1Q9BRV3 221 aa10.69□□□□□ -0.7
RTN4-210ENST00000427710 PARD6GQ9BYG4 376 aaPredicted RBP10.69□□□□□ -0.7
RTN4-210ENST00000427710 HRH4Q9H3N8 390 aa10.69□□□□□ -0.7
RTN4-210ENST00000427710 KLK5Q9Y337 293 aaPredicted RBP10.69□□□□□ -0.7
RTN4-210ENST00000427710 GOLT1BQ9Y3E0 138 aa10.69□□□□□ -0.7
RTN4-210ENST00000427710 EIF3GO75821 320 aaKnown RBP eCLIP10.68□□□□□ -0.74e-6■■■□□ 15.9
RTN4-210ENST00000427710 BLNKQ8WV28 456 aa10.68□□□□□ -0.7
RTN4-210ENST00000427710 IGF2BP2-AS1Q96M15 143 aa10.68□□□□□ -0.7
RTN4-210ENST00000427710 SLC25A2Q9BXI2 301 aa10.68□□□□□ -0.7
RTN4-210ENST00000427710 PPP1R14DQ9NXH3 145 aa10.68□□□□□ -0.7
RTN4-210ENST00000427710 ZNF705GA8MUZ8 300 aaPredicted RBP10.67□□□□□ -0.7
RTN4-210ENST00000427710 BOLA2-SMG1P6H3BVE0 249 aa10.67□□□□□ -0.7
RTN4-210ENST00000427710 LY6G6CO95867 125 aa10.67□□□□□ -0.7
RTN4-210ENST00000427710 KIR3DS1Q14943 382 aa10.67□□□□□ -0.7
RTN4-210ENST00000427710 C12orf74Q32Q52 190 aa10.67□□□□□ -0.7
RTN4-210ENST00000427710 Q5BKY6 102 aa10.67□□□□□ -0.7
RTN4-210ENST00000427710 FAM167A-AS1Q96KT0 104 aa10.67□□□□□ -0.7
RTN4-210ENST00000427710 NEU1Q99519 415 aa10.67□□□□□ -0.7
RTN4-210ENST00000427710 TMEM208Q9BTX3 173 aa10.67□□□□□ -0.7
RTN4-210ENST00000427710 PLA2G2EQ9NZK7 142 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms