RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 CFHR2P36980 270 aa4.48□□□□□ -1.69
VTI1BP4-201ENST00000427516 LEPP41159 167 aa4.48□□□□□ -1.69
VTI1BP4-201ENST00000427516 ATP5J2P56134 94 aa4.48□□□□□ -1.69
VTI1BP4-201ENST00000427516 FOXF2Q12947 444 aa4.48□□□□□ -1.69
VTI1BP4-201ENST00000427516 DIAPH2-AS1Q14236 149 aa4.48□□□□□ -1.69
VTI1BP4-201ENST00000427516 CR1LQ2VPA4 569 aa4.48□□□□□ -1.69
VTI1BP4-201ENST00000427516 LINC00305Q7Z4B0 112 aa4.48□□□□□ -1.69
VTI1BP4-201ENST00000427516 AMN1Q8IY45 258 aa4.48□□□□□ -1.69
VTI1BP4-201ENST00000427516 Q8N8P6 123 aa4.48□□□□□ -1.69
VTI1BP4-201ENST00000427516 CCL4L1Q8NHW4 92 aa4.48□□□□□ -1.69
VTI1BP4-201ENST00000427516 FAM57AQ8TBR7 257 aa4.48□□□□□ -1.69
VTI1BP4-201ENST00000427516 RASL10AQ92737 203 aa4.48□□□□□ -1.69
VTI1BP4-201ENST00000427516 DUX5Q96PT3 197 aa4.48□□□□□ -1.69
VTI1BP4-201ENST00000427516 FOXC2Q99958 501 aa4.48□□□□□ -1.69
VTI1BP4-201ENST00000427516 PRO1854Q9UHT4 67 aa4.48□□□□□ -1.69
VTI1BP4-201ENST00000427516 HHLA3Q9XRX5 114 aa4.48□□□□□ -1.69
VTI1BP4-201ENST00000427516 NCKAP5O14513 1909 aa4.48□□□□□ -1.69
VTI1BP4-201ENST00000427516 IGKV3D-15A0A087WSY6 115 aa4.47□□□□□ -1.69
VTI1BP4-201ENST00000427516 A0A096LNJ9 63 aa4.47□□□□□ -1.69
VTI1BP4-201ENST00000427516 TRAV8-1A0A0A6YYK1 113 aa4.47□□□□□ -1.69
VTI1BP4-201ENST00000427516 LOC389332A0A1B0GUA5 103 aa4.47□□□□□ -1.69
VTI1BP4-201ENST00000427516 LINC00473A8K010 186 aa4.47□□□□□ -1.69
VTI1BP4-201ENST00000427516 UPK2O00526 184 aa4.47□□□□□ -1.69
VTI1BP4-201ENST00000427516 TIMM23O14925 209 aa4.47□□□□□ -1.69
VTI1BP4-201ENST00000427516 ARMS2P0C7Q2 107 aa4.47□□□□□ -1.69
VTI1BP4-201ENST00000427516 CECR9P0C854 216 aa4.47□□□□□ -1.69
VTI1BP4-201ENST00000427516 ZNF138P52744 262 aa4.47□□□□□ -1.69
VTI1BP4-201ENST00000427516 LOXL3P58215 753 aa4.47□□□□□ -1.69
VTI1BP4-201ENST00000427516 PDE6HQ13956 83 aa4.47□□□□□ -1.69
VTI1BP4-201ENST00000427516 LAGE3Q14657 143 aa4.47□□□□□ -1.69
VTI1BP4-201ENST00000427516 PRR31Q5SQ13 230 aa4.47□□□□□ -1.69
VTI1BP4-201ENST00000427516 GAGE2AQ6NT46 116 aa4.47□□□□□ -1.69
VTI1BP4-201ENST00000427516 C6orf15Q6UXA7 325 aaPredicted RBP4.47□□□□□ -1.69
VTI1BP4-201ENST00000427516 ZCCHC24Q8N2G6 241 aaKnown RBP4.47□□□□□ -1.69
VTI1BP4-201ENST00000427516 ITLN1Q8WWA0 313 aa4.47□□□□□ -1.69
VTI1BP4-201ENST00000427516 KIR2DL4Q99706 377 aa4.47□□□□□ -1.69
VTI1BP4-201ENST00000427516 SCNM1Q9BWG6 230 aa4.47□□□□□ -1.69
VTI1BP4-201ENST00000427516 Q9H3A6 140 aa4.47□□□□□ -1.69
VTI1BP4-201ENST00000427516 DYNLRB1Q9NP97 96 aa4.47□□□□□ -1.69
VTI1BP4-201ENST00000427516 DKK2Q9UBU2 259 aa4.47□□□□□ -1.69
VTI1BP4-201ENST00000427516 CHCHD2Q9Y6H1 151 aaPredicted RBP4.47□□□□□ -1.69
VTI1BP4-201ENST00000427516 SHANK1Q9Y566 2161 aa4.47□□□□□ -1.69
VTI1BP4-201ENST00000427516 IGHV1-45A0A0A0MS14 117 aa4.46□□□□□ -1.7
VTI1BP4-201ENST00000427516 TRAV4A0A0B4J268 109 aa4.46□□□□□ -1.7
VTI1BP4-201ENST00000427516 A0A0B4J2C4 111 aa4.46□□□□□ -1.7
VTI1BP4-201ENST00000427516 TRBV10-2A0A0K0K1G8 114 aa4.46□□□□□ -1.7
VTI1BP4-201ENST00000427516 WI2-2373I1.2A0A1W2PRP0 233 aa4.46□□□□□ -1.7
VTI1BP4-201ENST00000427516 K7EM74 188 aa4.46□□□□□ -1.7
VTI1BP4-201ENST00000427516 K7ESF4 209 aa4.46□□□□□ -1.7
VTI1BP4-201ENST00000427516 TRACP01848 142 aa4.46□□□□□ -1.7
VTI1BP4-201ENST00000427516 CRYGAP11844 174 aa4.46□□□□□ -1.7
VTI1BP4-201ENST00000427516 SSR4P51571 173 aa4.46□□□□□ -1.7
VTI1BP4-201ENST00000427516 PPP1CAP62136 330 aa4.46□□□□□ -1.7
VTI1BP4-201ENST00000427516 MRPS21P82921 87 aaKnown RBP4.46□□□□□ -1.7
VTI1BP4-201ENST00000427516 PAX8Q06710 450 aa4.46□□□□□ -1.7
VTI1BP4-201ENST00000427516 PRNTQ86SH4 94 aa4.46□□□□□ -1.7
VTI1BP4-201ENST00000427516 GTSCR1Q86UQ5 136 aa4.46□□□□□ -1.7
VTI1BP4-201ENST00000427516 FGFBP3Q8TAT2 258 aa4.46□□□□□ -1.7
VTI1BP4-201ENST00000427516 NPIPB3Q92617 1050 aa4.46□□□□□ -1.7
VTI1BP4-201ENST00000427516 C1orf159Q96HA4 380 aa4.46□□□□□ -1.7
VTI1BP4-201ENST00000427516 AJUBAQ96IF1 538 aa4.46□□□□□ -1.7
VTI1BP4-201ENST00000427516 MCRIP2Q9BUT9 160 aaKnown RBP4.46□□□□□ -1.7
VTI1BP4-201ENST00000427516 CXXC4Q9H2H0 198 aa4.46□□□□□ -1.7
VTI1BP4-201ENST00000427516 PPDPFQ9H3Y8 114 aa4.46□□□□□ -1.7
VTI1BP4-201ENST00000427516 FSCN3Q9NQT6 498 aa4.46□□□□□ -1.7
VTI1BP4-201ENST00000427516 TMEM160Q9NX00 188 aa4.46□□□□□ -1.7
VTI1BP4-201ENST00000427516 ARHGAP21Q5T5U3 1957 aa4.45□□□□□ -1.7
VTI1BP4-201ENST00000427516 EXPH5Q8NEV8 1989 aa4.45□□□□□ -1.7
VTI1BP4-201ENST00000427516 IGHV5-51A0A0C4DH38 117 aa4.45□□□□□ -1.7
VTI1BP4-201ENST00000427516 ZNF815PA8K554 130 aa4.45□□□□□ -1.7
VTI1BP4-201ENST00000427516 IQCF6A8MYZ5 107 aa4.45□□□□□ -1.7
VTI1BP4-201ENST00000427516 NDUFC2-KCTD14E9PQ53 114 aa4.45□□□□□ -1.7
VTI1BP4-201ENST00000427516 LGALS9O00182 355 aa4.45□□□□□ -1.7
VTI1BP4-201ENST00000427516 PRRG2O14669 202 aa4.45□□□□□ -1.7
VTI1BP4-201ENST00000427516 CRLF1O75462 422 aa4.45□□□□□ -1.7
VTI1BP4-201ENST00000427516 PYYP10082 97 aa4.45□□□□□ -1.7
VTI1BP4-201ENST00000427516 RNASE2P10153 161 aaKnown RBP4.45□□□□□ -1.7
VTI1BP4-201ENST00000427516 GP9P14770 177 aa4.45□□□□□ -1.7
VTI1BP4-201ENST00000427516 RPL7P18124 248 aaKnown RBP4.45□□□□□ -1.7
VTI1BP4-201ENST00000427516 GLRXP35754 106 aa4.45□□□□□ -1.7
VTI1BP4-201ENST00000427516 BRWD1-AS2P59051 145 aa4.45□□□□□ -1.7
VTI1BP4-201ENST00000427516 MRPL51Q4U2R6 128 aaKnown RBP4.45□□□□□ -1.7
VTI1BP4-201ENST00000427516 COX8CQ7Z4L0 72 aa4.45□□□□□ -1.7
VTI1BP4-201ENST00000427516 LINC00643Q86TS7 51 aa4.45□□□□□ -1.7
VTI1BP4-201ENST00000427516 NDUFA11Q86Y39 141 aa4.45□□□□□ -1.7
VTI1BP4-201ENST00000427516 PATE1Q8WXA2 126 aa4.45□□□□□ -1.7
VTI1BP4-201ENST00000427516 CARD19Q96LW7 228 aa4.45□□□□□ -1.7
VTI1BP4-201ENST00000427516 FANCD2OSQ96PS1 177 aa4.45□□□□□ -1.7
VTI1BP4-201ENST00000427516 DUX3Q96PT4 197 aa4.45□□□□□ -1.7
VTI1BP4-201ENST00000427516 LINC01587Q99440 93 aa4.45□□□□□ -1.7
VTI1BP4-201ENST00000427516 SELENOKQ9Y6D0 94 aa4.45□□□□□ -1.7
VTI1BP4-201ENST00000427516 MYOFQ9NZM1 2061 aa4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 IGKV2D-26A0A0A0MRZ7 120 aa4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 TRAV40A0A0B4J280 105 aa4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 A0A1W2PPC4 97 aa4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 F5H768 121 aa4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 TNFRSF6BO95407 300 aa4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 TCL1BO95988 128 aa4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 CD3EP07766 207 aa4.44□□□□□ -1.7
VTI1BP4-201ENST00000427516 COX7CP15954 63 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 270.8 ms