RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 H3BTX0 84 aa13.13□□□□□ -0.31
HERC3-205ENST00000426683 IFNA5P01569 189 aa13.13□□□□□ -0.31
HERC3-205ENST00000426683 IGLC2P0DOY2 106 aa13.13□□□□□ -0.31
HERC3-205ENST00000426683 CXCL2P19875 107 aa13.13□□□□□ -0.31
HERC3-205ENST00000426683 HLA-DMBP28068 263 aa13.13□□□□□ -0.31
HERC3-205ENST00000426683 FXYD7P58549 80 aa13.13□□□□□ -0.31
HERC3-205ENST00000426683 Q5BKY6 102 aa13.13□□□□□ -0.31
HERC3-205ENST00000426683 FAM78BQ5VT40 261 aa13.13□□□□□ -0.31
HERC3-205ENST00000426683 LCN15Q6UWW0 184 aa13.13□□□□□ -0.31
HERC3-205ENST00000426683 ZNF738Q8NE65 137 aa13.13□□□□□ -0.31
HERC3-205ENST00000426683 SCGB1C1Q8TD33 95 aa13.13□□□□□ -0.31
HERC3-205ENST00000426683 CLUHP3Q96NS8 147 aa13.13□□□□□ -0.31
HERC3-205ENST00000426683 C1QTNF4Q9BXJ3 329 aa13.13□□□□□ -0.31
HERC3-205ENST00000426683 WFDC1Q9HC57 220 aa13.13□□□□□ -0.31
HERC3-205ENST00000426683 XCL2Q9UBD3 114 aa13.13□□□□□ -0.31
HERC3-205ENST00000426683 CSNK1G2-AS1Q8NCQ2 148 aa13.12□□□□□ -0.31
HERC3-205ENST00000426683 SLC50A1Q9BRV3 221 aa13.12□□□□□ -0.31
HERC3-205ENST00000426683 HRH4Q9H3N8 390 aa13.12□□□□□ -0.31
HERC3-205ENST00000426683 H3BQ15 152 aa13.11□□□□□ -0.31
HERC3-205ENST00000426683 PSG9Q00887 426 aa13.11□□□□□ -0.31
HERC3-205ENST00000426683 PSG3Q16557 428 aa13.11□□□□□ -0.31
HERC3-205ENST00000426683 ZNF331Q9NQX6 463 aaPredicted RBP13.11□□□□□ -0.31
HERC3-205ENST00000426683 SLC17A3O00476 420 aa13.1□□□□□ -0.31
HERC3-205ENST00000426683 DUSP14O95147 198 aaKnown RBP13.1□□□□□ -0.31
HERC3-205ENST00000426683 ZNF705DP0CH99 300 aaPredicted RBP13.1□□□□□ -0.31
HERC3-205ENST00000426683 ZNF705BP0CI00 300 aaPredicted RBP13.1□□□□□ -0.31
HERC3-205ENST00000426683 CNN1P51911 297 aaKnown RBP13.1□□□□□ -0.31
HERC3-205ENST00000426683 MIR17HGQ75NE6 70 aa13.1□□□□□ -0.31
HERC3-205ENST00000426683 AQP10Q96PS8 301 aa13.1□□□□□ -0.31
HERC3-205ENST00000426683 PARD6GQ9BYG4 376 aaPredicted RBP13.1□□□□□ -0.31
HERC3-205ENST00000426683 SLC35B3Q9H1N7 401 aa13.1□□□□□ -0.31
HERC3-205ENST00000426683 ZNF705EA8MWA4 302 aaPredicted RBP13.09□□□□□ -0.31
HERC3-205ENST00000426683 DEFB4AO15263 64 aa13.09□□□□□ -0.31
HERC3-205ENST00000426683 GUK1Q16774 197 aa13.09□□□□□ -0.31
HERC3-205ENST00000426683 FFAR4Q5NUL3 377 aa13.09□□□□□ -0.31
HERC3-205ENST00000426683 OR2T35Q8NGX2 323 aa13.09□□□□□ -0.31
HERC3-205ENST00000426683 SAT2Q96F10 170 aaPredicted RBP13.09□□□□□ -0.31
HERC3-205ENST00000426683 MFFQ9GZY8 342 aa13.09□□□□□ -0.31
HERC3-205ENST00000426683 C11orf68Q9H3H3 251 aaKnown RBP13.09□□□□□ -0.31
HERC3-205ENST00000426683 ZNF586Q9NXT0 402 aa13.09□□□□□ -0.31
HERC3-205ENST00000426683 TMEM14CQ9P0S9 112 aa13.09□□□□□ -0.31
HERC3-205ENST00000426683 X6R8D5 127 aa13.09□□□□□ -0.31
HERC3-205ENST00000426683 A8MTW9 85 aa13.08□□□□□ -0.32
HERC3-205ENST00000426683 PYYP10082 97 aa13.08□□□□□ -0.32
HERC3-205ENST00000426683 PRB4P10163 310 aaPredicted RBP13.08□□□□□ -0.32
HERC3-205ENST00000426683 HIST1H1AQ02539 215 aaPredicted RBP13.08□□□□□ -0.32
HERC3-205ENST00000426683 OR8A1Q8NGG7 326 aa13.08□□□□□ -0.32
HERC3-205ENST00000426683 RPUSD4Q96CM3 377 aaKnown RBP13.08□□□□□ -0.32
HERC3-205ENST00000426683 SLC25A2Q9BXI2 301 aa13.08□□□□□ -0.32
HERC3-205ENST00000426683 MRPL32Q9BYC8 188 aaKnown RBP13.08□□□□□ -0.32
HERC3-205ENST00000426683 STARD9Q9P2P6 4700 aa13.07□□□□□ -0.32
HERC3-205ENST00000426683 FXYD6-FXYD2A0A087WZ82 144 aa13.07□□□□□ -0.32
HERC3-205ENST00000426683 IGHV4-28A0A0C4DH34 117 aa13.07□□□□□ -0.32
HERC3-205ENST00000426683 HIST1H1EP10412 219 aaKnown RBP13.07□□□□□ -0.32
HERC3-205ENST00000426683 MIFP14174 115 aa13.07□□□□□ -0.32
HERC3-205ENST00000426683 AMTNQ6UX39 209 aa13.07□□□□□ -0.32
HERC3-205ENST00000426683 Q8NAQ8 132 aa13.07□□□□□ -0.32
HERC3-205ENST00000426683 FAM167A-AS1Q96KT0 104 aa13.07□□□□□ -0.32
HERC3-205ENST00000426683 FUT9Q9Y231 359 aa13.07□□□□□ -0.32
HERC3-205ENST00000426683 RFNGQ9Y644 331 aa13.07□□□□□ -0.32
HERC3-205ENST00000426683 TRBV19A0A075B6N1 114 aa13.06□□□□□ -0.32
HERC3-205ENST00000426683 ZNF705FA8MVS1 300 aaPredicted RBP13.06□□□□□ -0.32
HERC3-205ENST00000426683 ZNF253O75346 499 aa13.06□□□□□ -0.32
HERC3-205ENST00000426683 PMS2P11Q13670 270 aa13.06□□□□□ -0.32
HERC3-205ENST00000426683 ZNF266Q14584 549 aa13.06□□□□□ -0.32
HERC3-205ENST00000426683 INO80EQ8NBZ0 244 aaPredicted RBP13.06□□□□□ -0.32
HERC3-205ENST00000426683 KMT2CQ8NEZ4 4911 aaKnown RBP13.06□□□□□ -0.32
HERC3-205ENST00000426683 RBMY1A1P0DJD3 496 aaKnown RBP13.05□□□□□ -0.32
HERC3-205ENST00000426683 RBMY1CP0DJD4 496 aa13.05□□□□□ -0.32
HERC3-205ENST00000426683 RHOBP62745 196 aa13.05□□□□□ -0.32
HERC3-205ENST00000426683 RBMY1FQ15415 496 aaKnown RBP13.05□□□□□ -0.32
HERC3-205ENST00000426683 ZNF705AQ6ZN79 300 aaPredicted RBP13.05□□□□□ -0.32
HERC3-205ENST00000426683 BLNKQ8WV28 456 aa13.05□□□□□ -0.32
HERC3-205ENST00000426683 OR51M1Q9H341 326 aa13.05□□□□□ -0.32
HERC3-205ENST00000426683 TIMM9Q9Y5J7 89 aa13.05□□□□□ -0.32
HERC3-205ENST00000426683 IGHV3OR16-12A0A075B7B8 117 aa13.04□□□□□ -0.32
HERC3-205ENST00000426683 RNF222A6NCQ9 220 aa13.04□□□□□ -0.32
HERC3-205ENST00000426683 CXorf65A6NEN9 183 aa13.04□□□□□ -0.32
HERC3-205ENST00000426683 G3V3Q6 166 aa13.04□□□□□ -0.32
HERC3-205ENST00000426683 SPINK13Q1W4C9 94 aa13.04□□□□□ -0.32
HERC3-205ENST00000426683 HSD17B11Q8NBQ5 300 aa13.04□□□□□ -0.32
HERC3-205ENST00000426683 PAXXQ9BUH6 204 aa13.04□□□□□ -0.32
HERC3-205ENST00000426683 PPP1R14DQ9NXH3 145 aa13.04□□□□□ -0.32
HERC3-205ENST00000426683 TNFSF18Q9UNG2 199 aa13.04□□□□□ -0.32
HERC3-205ENST00000426683 PRAC2D3DTV9 90 aa13.03□□□□□ -0.32
HERC3-205ENST00000426683 M0R2Z0 102 aa13.03□□□□□ -0.32
HERC3-205ENST00000426683 NDUFB4O95168 129 aa13.03□□□□□ -0.32
HERC3-205ENST00000426683 AMBPP02760 352 aa13.03□□□□□ -0.32
HERC3-205ENST00000426683 PDE6HQ13956 83 aa13.03□□□□□ -0.32
HERC3-205ENST00000426683 ACOT6Q3I5F7 207 aaPredicted RBP13.03□□□□□ -0.32
HERC3-205ENST00000426683 C11orf45Q8TAV5 145 aa13.03□□□□□ -0.32
HERC3-205ENST00000426683 IGF2BP2-AS1Q96M15 143 aa13.03□□□□□ -0.32
HERC3-205ENST00000426683 GOLT1BQ9Y3E0 138 aa13.03□□□□□ -0.32
HERC3-205ENST00000426683 BOLA2-SMG1P6H3BVE0 249 aa13.02□□□□□ -0.33
HERC3-205ENST00000426683 OR7C2O60412 319 aa13.02□□□□□ -0.33
HERC3-205ENST00000426683 OR10J4P0C629 311 aa13.02□□□□□ -0.33
HERC3-205ENST00000426683 NBEAP1P0C6P0 100 aa13.02□□□□□ -0.33
HERC3-205ENST00000426683 C1orf158Q8N1D5 194 aa13.02□□□□□ -0.33
HERC3-205ENST00000426683 OR10J6PQ8NGY7 276 aa13.02□□□□□ -0.33
HERC3-205ENST00000426683 RNF141Q8WVD5 230 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 203.4 ms