RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 TMEM37Q8WXS4 190 aa13.14□□□□□ -0.31
NUP50-207ENST00000424634 C2orf50Q96LR7 162 aa13.14□□□□□ -0.31
NUP50-207ENST00000424634 NIPSNAP3BQ9BS92 247 aa13.14□□□□□ -0.31
NUP50-207ENST00000424634 YTHDF2Q9Y5A9 579 aaKnown RBP13.14□□□□□ -0.31
NUP50-207ENST00000424634 CST7O76096 145 aa13.13□□□□□ -0.31
NUP50-207ENST00000424634 PSG3Q16557 428 aa13.13□□□□□ -0.31
NUP50-207ENST00000424634 RRN3P1Q2M238 152 aa13.13□□□□□ -0.31
NUP50-207ENST00000424634 PXDC1Q5TGL8 231 aa13.13□□□□□ -0.31
NUP50-207ENST00000424634 MORN5Q5VZ52 161 aa13.13□□□□□ -0.31
NUP50-207ENST00000424634 OR8A1Q8NGG7 326 aa13.13□□□□□ -0.31
NUP50-207ENST00000424634 NDUFAF3Q9BU61 184 aa13.13□□□□□ -0.31
NUP50-207ENST00000424634 FAT2Q9NYQ8 4349 aa13.13□□□□□ -0.31
NUP50-207ENST00000424634 ZNF705GA8MUZ8 300 aaPredicted RBP13.12□□□□□ -0.31
NUP50-207ENST00000424634 BCAP31P51572 246 aa13.12□□□□□ -0.31
NUP50-207ENST00000424634 S100A7AQ86SG5 101 aa13.12□□□□□ -0.31
NUP50-207ENST00000424634 BAP18Q8IXM2 172 aa13.12□□□□□ -0.31
NUP50-207ENST00000424634 TMEM208Q9BTX3 173 aa13.12□□□□□ -0.31
NUP50-207ENST00000424634 TRAV12-2A0A075B6T6 113 aa13.11□□□□□ -0.31
NUP50-207ENST00000424634 FAM240BA0A1B0GVZ2 78 aa13.11□□□□□ -0.31
NUP50-207ENST00000424634 CAV2P51636 162 aa13.11□□□□□ -0.31
NUP50-207ENST00000424634 HIST1H1AQ02539 215 aaPredicted RBP13.11□□□□□ -0.31
NUP50-207ENST00000424634 LINC00299Q6ZSB3 139 aa13.11□□□□□ -0.31
NUP50-207ENST00000424634 LRRC20Q8TCA0 184 aa13.11□□□□□ -0.31
NUP50-207ENST00000424634 TEX48A0A1B0GUV7 120 aa13.1□□□□□ -0.31
NUP50-207ENST00000424634 COX7A2P2O60397 106 aa13.1□□□□□ -0.31
NUP50-207ENST00000424634 INSP01308 110 aa13.1□□□□□ -0.31
NUP50-207ENST00000424634 CAMLGP49069 296 aa13.1□□□□□ -0.31
NUP50-207ENST00000424634 OPCMLQ14982 345 aa13.1□□□□□ -0.31
NUP50-207ENST00000424634 OXA1LQ15070 435 aa13.1□□□□□ -0.31
NUP50-207ENST00000424634 MIC13Q5XKP0 118 aa13.1□□□□□ -0.31
NUP50-207ENST00000424634 NRARPQ7Z6K4 114 aa13.1□□□□□ -0.31
NUP50-207ENST00000424634 ZNF331Q9NQX6 463 aaPredicted RBP13.1□□□□□ -0.31
NUP50-207ENST00000424634 IGSF23A1L1A6 192 aa13.09□□□□□ -0.31
NUP50-207ENST00000424634 H3BTX0 84 aa13.09□□□□□ -0.31
NUP50-207ENST00000424634 BOLA2-SMG1P6H3BVE0 249 aa13.09□□□□□ -0.31
NUP50-207ENST00000424634 AZU1P20160 251 aa13.09□□□□□ -0.31
NUP50-207ENST00000424634 RHOBP62745 196 aa13.09□□□□□ -0.31
NUP50-207ENST00000424634 ASAH1Q13510 395 aa13.09□□□□□ -0.31
NUP50-207ENST00000424634 RAB32Q13637 225 aa13.09□□□□□ -0.31
NUP50-207ENST00000424634 VWC2Q2TAL6 325 aa13.09□□□□□ -0.31
NUP50-207ENST00000424634 C10orf113Q5VZT2 155 aa13.09□□□□□ -0.31
NUP50-207ENST00000424634 POM121L12Q8N7R1 296 aa13.09□□□□□ -0.31
NUP50-207ENST00000424634 RPUSD4Q96CM3 377 aaKnown RBP13.09□□□□□ -0.31
NUP50-207ENST00000424634 DNAJC4Q9NNZ3 241 aa13.09□□□□□ -0.31
NUP50-207ENST00000424634 RNF24Q9Y225 148 aa13.09□□□□□ -0.31
NUP50-207ENST00000424634 WDR83OSQ9Y284 106 aa13.09□□□□□ -0.31
NUP50-207ENST00000424634 TRAV5A0A0B4J249 113 aa13.08□□□□□ -0.32
NUP50-207ENST00000424634 PLAC8L1A1L4L8 177 aa13.08□□□□□ -0.32
NUP50-207ENST00000424634 H3BQ15 152 aa13.08□□□□□ -0.32
NUP50-207ENST00000424634 SLC17A3O00476 420 aa13.08□□□□□ -0.32
NUP50-207ENST00000424634 P0DMU3 169 aa13.08□□□□□ -0.32
NUP50-207ENST00000424634 FAM231AP0DMU4 169 aa13.08□□□□□ -0.32
NUP50-207ENST00000424634 FAM231CP0DMU5 169 aa13.08□□□□□ -0.32
NUP50-207ENST00000424634 HTN3P15516 51 aa13.08□□□□□ -0.32
NUP50-207ENST00000424634 CXCL2P19875 107 aa13.08□□□□□ -0.32
NUP50-207ENST00000424634 S100A10P60903 97 aa13.08□□□□□ -0.32
NUP50-207ENST00000424634 MZT2BQ6NZ67 158 aa13.08□□□□□ -0.32
NUP50-207ENST00000424634 LCN15Q6UWW0 184 aa13.08□□□□□ -0.32
NUP50-207ENST00000424634 BPIFA4PQ86YQ2 179 aa13.08□□□□□ -0.32
NUP50-207ENST00000424634 TMEM252Q8N6L7 170 aa13.08□□□□□ -0.32
NUP50-207ENST00000424634 LYRM2Q9NU23 88 aaPredicted RBP13.08□□□□□ -0.32
NUP50-207ENST00000424634 UQCC1Q9NVA1 299 aa13.08□□□□□ -0.32
NUP50-207ENST00000424634 PRAC2D3DTV9 90 aa13.07□□□□□ -0.32
NUP50-207ENST00000424634 IGLC2P0DOY2 106 aa13.07□□□□□ -0.32
NUP50-207ENST00000424634 PVALBP20472 110 aaPredicted RBP13.07□□□□□ -0.32
NUP50-207ENST00000424634 SULT1A1P50225 295 aa13.07□□□□□ -0.32
NUP50-207ENST00000424634 DAD1P61803 113 aa13.07□□□□□ -0.32
NUP50-207ENST00000424634 RAB31Q13636 194 aa13.07□□□□□ -0.32
NUP50-207ENST00000424634 S100ZQ8WXG8 99 aa13.07□□□□□ -0.32
NUP50-207ENST00000424634 SAT2Q96F10 170 aaPredicted RBP13.07□□□□□ -0.32
NUP50-207ENST00000424634 FAM210BQ96KR6 192 aa13.07□□□□□ -0.32
NUP50-207ENST00000424634 S100A11P31949 105 aa13.06□□□□□ -0.32
NUP50-207ENST00000424634 B2MP61769 119 aa13.06□□□□□ -0.32
NUP50-207ENST00000424634 IFITM3Q01628 133 aa13.06□□□□□ -0.32
NUP50-207ENST00000424634 KIR3DS1Q14943 382 aa13.06□□□□□ -0.32
NUP50-207ENST00000424634 FCN2Q15485 313 aa13.06□□□□□ -0.32
NUP50-207ENST00000424634 Q6ZRG5 221 aa13.06□□□□□ -0.32
NUP50-207ENST00000424634 SLC50A1Q9BRV3 221 aa13.06□□□□□ -0.32
NUP50-207ENST00000424634 A6NHS1 94 aa13.05□□□□□ -0.32
NUP50-207ENST00000424634 TSPOP30536 169 aa13.05□□□□□ -0.32
NUP50-207ENST00000424634 RPL29P47914 159 aaKnown RBP13.05□□□□□ -0.32
NUP50-207ENST00000424634 LINC01587Q99440 93 aa13.05□□□□□ -0.32
NUP50-207ENST00000424634 PPP1R14DQ9NXH3 145 aa13.05□□□□□ -0.32
NUP50-207ENST00000424634 UBE2L5PA0A1B0GUS4 154 aa13.04□□□□□ -0.32
NUP50-207ENST00000424634 LYRM9A8MSI8 78 aa13.04□□□□□ -0.32
NUP50-207ENST00000424634 SIX6O95475 246 aa13.04□□□□□ -0.32
NUP50-207ENST00000424634 TMEM88Q6PEY1 159 aa13.04□□□□□ -0.32
NUP50-207ENST00000424634 CHAC2Q8WUX2 184 aa13.04□□□□□ -0.32
NUP50-207ENST00000424634 PARD6GQ9BYG4 376 aaPredicted RBP13.04□□□□□ -0.32
NUP50-207ENST00000424634 SLC39A9Q9NUM3 307 aa13.04□□□□□ -0.32
NUP50-207ENST00000424634 HERC2O95714 4834 aa13.03□□□□□ -0.32
NUP50-207ENST00000424634 UPK1BO75841 260 aa13.03□□□□□ -0.32
NUP50-207ENST00000424634 CDKN1BP46527 198 aa13.03□□□□□ -0.32
NUP50-207ENST00000424634 BAXQ07812 192 aa13.03□□□□□ -0.32
NUP50-207ENST00000424634 TMEM256Q8N2U0 113 aa13.03□□□□□ -0.32
NUP50-207ENST00000424634 OR1L4Q8NGR5 311 aa13.03□□□□□ -0.32
NUP50-207ENST00000424634 ZNF586Q9NXT0 402 aa13.03□□□□□ -0.32
NUP50-207ENST00000424634 PXMP4Q9Y6I8 212 aa13.03□□□□□ -0.32
NUP50-207ENST00000424634 NACAE9PAV3 2078 aa13.03□□□□□ -0.32
NUP50-207ENST00000424634 M0R2N4 97 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms