RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 DNAJC4Q9NNZ3 241 aa14.69□□□□□ -0.06
GTF3A-202ENST00000419181 CXCL3P19876 107 aa14.68□□□□□ -0.06
GTF3A-202ENST00000419181 FGF7P21781 194 aa14.68□□□□□ -0.06
GTF3A-202ENST00000419181 FXYD7P58549 80 aa14.68□□□□□ -0.06
GTF3A-202ENST00000419181 PSG9Q00887 426 aa14.68□□□□□ -0.06
GTF3A-202ENST00000419181 BPIFA4PQ86YQ2 179 aa14.68□□□□□ -0.06
GTF3A-202ENST00000419181 OR5C1Q8NGR4 320 aa14.68□□□□□ -0.06
GTF3A-202ENST00000419181 HRH4Q9H3N8 390 aa14.68□□□□□ -0.06
GTF3A-202ENST00000419181 SLC39A9Q9NUM3 307 aa14.68□□□□□ -0.06
GTF3A-202ENST00000419181 DNAH1Q9P2D7 4330 aa14.67□□□□□ -0.06
GTF3A-202ENST00000419181 ZNF705FA8MVS1 300 aaPredicted RBP14.67□□□□□ -0.06
GTF3A-202ENST00000419181 MPDU1O75352 247 aa14.67□□□□□ -0.06
GTF3A-202ENST00000419181 ZNF705DP0CH99 300 aaPredicted RBP14.67□□□□□ -0.06
GTF3A-202ENST00000419181 ZNF705BP0CI00 300 aaPredicted RBP14.67□□□□□ -0.06
GTF3A-202ENST00000419181 CXCL2P19875 107 aa14.67□□□□□ -0.06
GTF3A-202ENST00000419181 B2MP61769 119 aa14.67□□□□□ -0.06
GTF3A-202ENST00000419181 AMTNQ6UX39 209 aa14.67□□□□□ -0.06
GTF3A-202ENST00000419181 OR1L4Q8NGR5 311 aa14.67□□□□□ -0.06
GTF3A-202ENST00000419181 PTTG1O95997 202 aa14.66□□□□□ -0.06
GTF3A-202ENST00000419181 CNN1P51911 297 aaKnown RBP14.66□□□□□ -0.06
GTF3A-202ENST00000419181 LCN15Q6UWW0 184 aa14.66□□□□□ -0.06
GTF3A-202ENST00000419181 ZNF738Q8NE65 137 aa14.66□□□□□ -0.06
GTF3A-202ENST00000419181 PFDN5Q99471 154 aa14.66□□□□□ -0.06
GTF3A-202ENST00000419181 NEU1Q99519 415 aa14.66□□□□□ -0.06
GTF3A-202ENST00000419181 RNF126Q9BV68 326 aa14.66□□□□□ -0.06
GTF3A-202ENST00000419181 NPCDR1Q9BY65 106 aa14.66□□□□□ -0.06
GTF3A-202ENST00000419181 KLK5Q9Y337 293 aaPredicted RBP14.66□□□□□ -0.06
GTF3A-202ENST00000419181 PXMP4Q9Y6I8 212 aa14.66□□□□□ -0.06
GTF3A-202ENST00000419181 ALMS1Q8TCU4 4167 aa14.66□□□□□ -0.06
GTF3A-202ENST00000419181 DUSP14O95147 198 aaKnown RBP14.65□□□□□ -0.06
GTF3A-202ENST00000419181 MPC2O95563 127 aa14.65□□□□□ -0.06
GTF3A-202ENST00000419181 IGLC2P0DOY2 106 aa14.65□□□□□ -0.06
GTF3A-202ENST00000419181 HLA-DMBP28068 263 aa14.65□□□□□ -0.06
GTF3A-202ENST00000419181 PSG3Q16557 428 aa14.65□□□□□ -0.06
GTF3A-202ENST00000419181 LRRC20Q8TCA0 184 aa14.65□□□□□ -0.06
GTF3A-202ENST00000419181 ZNF331Q9NQX6 463 aaPredicted RBP14.65□□□□□ -0.06
GTF3A-202ENST00000419181 PET100P0DJ07 73 aa14.64□□□□□ -0.07
GTF3A-202ENST00000419181 CLINT1Q14677 625 aa14.64□□□□□ -0.07
GTF3A-202ENST00000419181 THAP6Q8TBB0 222 aa14.64□□□□□ -0.07
GTF3A-202ENST00000419181 SLC50A1Q9BRV3 221 aa14.64□□□□□ -0.07
GTF3A-202ENST00000419181 TRAV5A0A0B4J249 113 aa14.63□□□□□ -0.07
GTF3A-202ENST00000419181 SNRPCP09234 159 aaKnown RBP14.63□□□□□ -0.07
GTF3A-202ENST00000419181 OR11H7Q8NGC8 314 aa14.63□□□□□ -0.07
GTF3A-202ENST00000419181 ALG5Q9Y673 324 aa14.63□□□□□ -0.07
GTF3A-202ENST00000419181 SMIM9A6NGZ8 99 aa14.62□□□□□ -0.07
GTF3A-202ENST00000419181 H3BQ15 152 aa14.62□□□□□ -0.07
GTF3A-202ENST00000419181 SLC17A3O00476 420 aa14.62□□□□□ -0.07
GTF3A-202ENST00000419181 C1orf158Q8N1D5 194 aa14.62□□□□□ -0.07
GTF3A-202ENST00000419181 OR8A1Q8NGG7 326 aa14.62□□□□□ -0.07
GTF3A-202ENST00000419181 LINC00476Q8WZB0 136 aa14.62□□□□□ -0.07
GTF3A-202ENST00000419181 IGHV3OR16-12A0A075B7B8 117 aa14.61□□□□□ -0.07
GTF3A-202ENST00000419181 H3BTX0 84 aa14.61□□□□□ -0.07
GTF3A-202ENST00000419181 HIST1H1AQ02539 215 aaPredicted RBP14.61□□□□□ -0.07
GTF3A-202ENST00000419181 RPUSD4Q96CM3 377 aaKnown RBP14.61□□□□□ -0.07
GTF3A-202ENST00000419181 SAT2Q96F10 170 aaPredicted RBP14.61□□□□□ -0.07
GTF3A-202ENST00000419181 IGF2BP2-AS1Q96M15 143 aa14.61□□□□□ -0.07
GTF3A-202ENST00000419181 WDR61Q9GZS3 305 aaKnown RBP14.61□□□□□ -0.07
GTF3A-202ENST00000419181 CELA1Q9UNI1 258 aa14.61□□□□□ -0.07
GTF3A-202ENST00000419181 GOLT1BQ9Y3E0 138 aa14.61□□□□□ -0.07
GTF3A-202ENST00000419181 HYDINQ4G0P3 5121 aa14.61□□□□□ -0.07
GTF3A-202ENST00000419181 AMBPP02760 352 aa14.6□□□□□ -0.07
GTF3A-202ENST00000419181 GUK1Q16774 197 aa14.6□□□□□ -0.07
GTF3A-202ENST00000419181 SPINK13Q1W4C9 94 aa14.6□□□□□ -0.07
GTF3A-202ENST00000419181 GCSAMLQ5JQS6 135 aa14.6□□□□□ -0.07
GTF3A-202ENST00000419181 MBD2Q9UBB5 411 aa14.6□□□□□ -0.07
GTF3A-202ENST00000419181 HSPB11Q9Y547 144 aa14.6□□□□□ -0.07
GTF3A-202ENST00000419181 C11orf94C9JXX5 98 aa14.59□□□□□ -0.07
GTF3A-202ENST00000419181 M0R2Z0 102 aa14.59□□□□□ -0.07
GTF3A-202ENST00000419181 CRXO43186 299 aaPredicted RBP14.59□□□□□ -0.07
GTF3A-202ENST00000419181 ATP5SQ99766 215 aa14.59□□□□□ -0.07
GTF3A-202ENST00000419181 ZNF586Q9NXT0 402 aa14.59□□□□□ -0.07
GTF3A-202ENST00000419181 TMEM14CQ9P0S9 112 aa14.59□□□□□ -0.07
GTF3A-202ENST00000419181 RFNGQ9Y644 331 aa14.59□□□□□ -0.07
GTF3A-202ENST00000419181 TMEM189A5PLL7 270 aa14.58□□□□□ -0.08
GTF3A-202ENST00000419181 BOLA2-SMG1P6H3BVE0 249 aa14.58□□□□□ -0.08
GTF3A-202ENST00000419181 PRB4P10163 310 aaPredicted RBP14.58□□□□□ -0.08
GTF3A-202ENST00000419181 RPL12P30050 165 aaKnown RBP14.58□□□□□ -0.08
GTF3A-202ENST00000419181 Q6ZTC4 211 aa14.58□□□□□ -0.08
GTF3A-202ENST00000419181 KCNIP2Q9NS61 270 aa14.58□□□□□ -0.08
GTF3A-202ENST00000419181 ZNF253O75346 499 aa14.57□□□□□ -0.08
GTF3A-202ENST00000419181 INSP01308 110 aa14.57□□□□□ -0.08
GTF3A-202ENST00000419181 HBE1P02100 147 aa14.57□□□□□ -0.08
GTF3A-202ENST00000419181 C2CD4CQ8TF44 421 aa14.57□□□□□ -0.08
GTF3A-202ENST00000419181 TRBV19A0A075B6N1 114 aa14.56□□□□□ -0.08
GTF3A-202ENST00000419181 LY6G6CO95867 125 aa14.56□□□□□ -0.08
GTF3A-202ENST00000419181 RHOBP62745 196 aa14.56□□□□□ -0.08
GTF3A-202ENST00000419181 C12orf74Q32Q52 190 aa14.56□□□□□ -0.08
GTF3A-202ENST00000419181 BAP18Q8IXM2 172 aa14.56□□□□□ -0.08
GTF3A-202ENST00000419181 TRAV10A0A0B4J240 114 aa14.55□□□□□ -0.08
GTF3A-202ENST00000419181 PRAC2D3DTV9 90 aa14.55□□□□□ -0.08
GTF3A-202ENST00000419181 C17orf112F2Z3M2 114 aa14.55□□□□□ -0.08
GTF3A-202ENST00000419181 PYYP10082 97 aa14.55□□□□□ -0.08
GTF3A-202ENST00000419181 HIST1H1EP10412 219 aaKnown RBP14.55□□□□□ -0.08
GTF3A-202ENST00000419181 EMP1P54849 157 aa14.55□□□□□ -0.08
GTF3A-202ENST00000419181 FCN2Q15485 313 aa14.55□□□□□ -0.08
GTF3A-202ENST00000419181 FAM167A-AS1Q96KT0 104 aa14.55□□□□□ -0.08
GTF3A-202ENST00000419181 TMEM208Q9BTX3 173 aa14.55□□□□□ -0.08
GTF3A-202ENST00000419181 SLC25A2Q9BXI2 301 aa14.55□□□□□ -0.08
GTF3A-202ENST00000419181 MED28Q9H204 178 aa14.55□□□□□ -0.08
GTF3A-202ENST00000419181 TRAV12-2A0A075B6T6 113 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms