RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 TMEM189A5PLL7 270 aa11.23□□□□□ -0.61
ITGB1-204ENST00000417122 IGLL5B9A064 214 aa11.23□□□□□ -0.61
ITGB1-204ENST00000417122 CXCL3P19876 107 aa11.23□□□□□ -0.61
ITGB1-204ENST00000417122 TCTAP57738 103 aa11.23□□□□□ -0.61
ITGB1-204ENST00000417122 PRR20EP86478 221 aa11.23□□□□□ -0.61
ITGB1-204ENST00000417122 PRR20CP86479 221 aa11.23□□□□□ -0.61
ITGB1-204ENST00000417122 PRR20DP86480 221 aa11.23□□□□□ -0.61
ITGB1-204ENST00000417122 PRR20BP86481 221 aa11.23□□□□□ -0.61
ITGB1-204ENST00000417122 PRR20AP86496 221 aa11.23□□□□□ -0.61
ITGB1-204ENST00000417122 BAXQ07812 192 aa11.23□□□□□ -0.61
ITGB1-204ENST00000417122 ATP6V1FQ16864 119 aa11.23□□□□□ -0.61
ITGB1-204ENST00000417122 C12orf74Q32Q52 190 aa11.23□□□□□ -0.61
ITGB1-204ENST00000417122 MORN5Q5VZ52 161 aa11.23□□□□□ -0.61
ITGB1-204ENST00000417122 LGALS9CQ6DKI2 356 aa11.23□□□□□ -0.61
ITGB1-204ENST00000417122 BPIFA4PQ86YQ2 179 aa11.23□□□□□ -0.61
ITGB1-204ENST00000417122 C1orf158Q8N1D5 194 aa11.23□□□□□ -0.61
ITGB1-204ENST00000417122 NMES1Q9C002 83 aa11.23□□□□□ -0.61
ITGB1-204ENST00000417122 DNAJC4Q9NNZ3 241 aa11.23□□□□□ -0.61
ITGB1-204ENST00000417122 BATF3Q9NR55 127 aa11.23□□□□□ -0.61
ITGB1-204ENST00000417122 RLN2P04090 185 aa11.22□□□□□ -0.61
ITGB1-204ENST00000417122 CXCL2P19875 107 aa11.22□□□□□ -0.61
ITGB1-204ENST00000417122 RPL29P47914 159 aaKnown RBP11.22□□□□□ -0.61
ITGB1-204ENST00000417122 DEFA1P59665 94 aa11.22□□□□□ -0.61
ITGB1-204ENST00000417122 DEFA3P59666 94 aa11.22□□□□□ -0.61
ITGB1-204ENST00000417122 OPCMLQ14982 345 aa11.22□□□□□ -0.61
ITGB1-204ENST00000417122 PSG3Q16557 428 aa11.22□□□□□ -0.61
ITGB1-204ENST00000417122 LCN15Q6UWW0 184 aa11.22□□□□□ -0.61
ITGB1-204ENST00000417122 ZNF767PQ75MW2 155 aa11.22□□□□□ -0.61
ITGB1-204ENST00000417122 OR11H7Q8NGC8 314 aa11.22□□□□□ -0.61
ITGB1-204ENST00000417122 OR1L4Q8NGR5 311 aa11.22□□□□□ -0.61
ITGB1-204ENST00000417122 IGF2BP2-AS1Q96M15 143 aa11.22□□□□□ -0.61
ITGB1-204ENST00000417122 MARVELD1Q9BSK0 173 aa11.22□□□□□ -0.61
ITGB1-204ENST00000417122 RFNGQ9Y644 331 aa11.22□□□□□ -0.61
ITGB1-204ENST00000417122 AMBPP02760 352 aa11.21□□□□□ -0.61
ITGB1-204ENST00000417122 SNRPCP09234 159 aaKnown RBP11.21□□□□□ -0.61
ITGB1-204ENST00000417122 EMP1P54849 157 aa11.21□□□□□ -0.61
ITGB1-204ENST00000417122 B2MP61769 119 aa11.21□□□□□ -0.61
ITGB1-204ENST00000417122 SPINK13Q1W4C9 94 aa11.21□□□□□ -0.61
ITGB1-204ENST00000417122 LRRC37A5PQ49AS3 106 aa11.21□□□□□ -0.61
ITGB1-204ENST00000417122 OR8A1Q8NGG7 326 aa11.21□□□□□ -0.61
ITGB1-204ENST00000417122 PFDN5Q99471 154 aa11.21□□□□□ -0.61
ITGB1-204ENST00000417122 SLC50A1Q9BRV3 221 aa11.21□□□□□ -0.61
ITGB1-204ENST00000417122 ZNF331Q9NQX6 463 aaPredicted RBP11.21□□□□□ -0.61
ITGB1-204ENST00000417122 E5RGE8 158 aa11.2□□□□□ -0.62
ITGB1-204ENST00000417122 M0R2Z0 102 aa11.2□□□□□ -0.62
ITGB1-204ENST00000417122 HBE1P02100 147 aa11.2□□□□□ -0.62
ITGB1-204ENST00000417122 SPART-AS1P0CW21 52 aa11.2□□□□□ -0.62
ITGB1-204ENST00000417122 FGF7P21781 194 aa11.2□□□□□ -0.62
ITGB1-204ENST00000417122 CYCSP99999 105 aaKnown RBP11.2□□□□□ -0.62
ITGB1-204ENST00000417122 HIST1H1AQ02539 215 aaPredicted RBP11.2□□□□□ -0.62
ITGB1-204ENST00000417122 NHLH2Q02577 135 aa11.2□□□□□ -0.62
ITGB1-204ENST00000417122 CHAC2Q8WUX2 184 aa11.2□□□□□ -0.62
ITGB1-204ENST00000417122 TMEM208Q9BTX3 173 aa11.2□□□□□ -0.62
ITGB1-204ENST00000417122 SLC25A31Q9H0C2 315 aa11.2□□□□□ -0.62
ITGB1-204ENST00000417122 SLC39A9Q9NUM3 307 aa11.2□□□□□ -0.62
ITGB1-204ENST00000417122 OR5AC2Q9NZP5 309 aa11.2□□□□□ -0.62
ITGB1-204ENST00000417122 APLNQ9ULZ1 77 aa11.2□□□□□ -0.62
ITGB1-204ENST00000417122 DEFB131BA0A096LNP1 70 aa11.19□□□□□ -0.62
ITGB1-204ENST00000417122 LOC102723971A0A1B0GUV8 181 aa11.19□□□□□ -0.62
ITGB1-204ENST00000417122 H0YIZ8 118 aa11.19□□□□□ -0.62
ITGB1-204ENST00000417122 BOLA2-SMG1P6H3BVE0 249 aa11.19□□□□□ -0.62
ITGB1-204ENST00000417122 CRXO43186 299 aaPredicted RBP11.19□□□□□ -0.62
ITGB1-204ENST00000417122 INSP01308 110 aa11.19□□□□□ -0.62
ITGB1-204ENST00000417122 PRB4P10163 310 aaPredicted RBP11.19□□□□□ -0.62
ITGB1-204ENST00000417122 RHOBP62745 196 aa11.19□□□□□ -0.62
ITGB1-204ENST00000417122 RRN3P1Q2M238 152 aa11.19□□□□□ -0.62
ITGB1-204ENST00000417122 OR5C1Q8NGR4 320 aa11.19□□□□□ -0.62
ITGB1-204ENST00000417122 RPUSD4Q96CM3 377 aaKnown RBP11.19□□□□□ -0.62
ITGB1-204ENST00000417122 PXMP4Q9Y6I8 212 aa11.19□□□□□ -0.62
ITGB1-204ENST00000417122 IGHV4-4A0A075B6R2 117 aa11.18□□□□□ -0.62
ITGB1-204ENST00000417122 TRAV5A0A0B4J249 113 aa11.18□□□□□ -0.62
ITGB1-204ENST00000417122 H3BTX0 84 aa11.18□□□□□ -0.62
ITGB1-204ENST00000417122 SLC17A3O00476 420 aa11.18□□□□□ -0.62
ITGB1-204ENST00000417122 MPDU1O75352 247 aa11.18□□□□□ -0.62
ITGB1-204ENST00000417122 IGLC2P0DOY2 106 aa11.18□□□□□ -0.62
ITGB1-204ENST00000417122 H2BFSP57053 126 aa11.18□□□□□ -0.62
ITGB1-204ENST00000417122 NPCDR1Q9BY65 106 aa11.18□□□□□ -0.62
ITGB1-204ENST00000417122 PPP1R14DQ9NXH3 145 aa11.18□□□□□ -0.62
ITGB1-204ENST00000417122 DKK2Q9UBU2 259 aa11.18□□□□□ -0.62
ITGB1-204ENST00000417122 EPPK1P58107 5090 aaKnown RBP11.18□□□□□ -0.62
ITGB1-204ENST00000417122 TRAV12-2A0A075B6T6 113 aa11.17□□□□□ -0.62
ITGB1-204ENST00000417122 TEX48A0A1B0GUV7 120 aa11.17□□□□□ -0.62
ITGB1-204ENST00000417122 H3BQ15 152 aa11.17□□□□□ -0.62
ITGB1-204ENST00000417122 SSNA1O43805 119 aa11.17□□□□□ -0.62
ITGB1-204ENST00000417122 FAM222AQ5U5X8 452 aa11.17□□□□□ -0.62
ITGB1-204ENST00000417122 BAP18Q8IXM2 172 aa11.17□□□□□ -0.62
ITGB1-204ENST00000417122 RPP25LQ8N5L8 163 aaKnown RBP11.17□□□□□ -0.62
ITGB1-204ENST00000417122 SAT2Q96F10 170 aaPredicted RBP11.17□□□□□ -0.62
ITGB1-204ENST00000417122 RNF126Q9BV68 326 aa11.17□□□□□ -0.62
ITGB1-204ENST00000417122 YTHDF2Q9Y5A9 579 aaKnown RBP11.17□□□□□ -0.62
ITGB1-204ENST00000417122 GUK1Q16774 197 aa11.16□□□□□ -0.62
ITGB1-204ENST00000417122 THAP6Q8TBB0 222 aa11.16□□□□□ -0.62
ITGB1-204ENST00000417122 PPP1R1CQ8WVI7 109 aa11.16□□□□□ -0.62
ITGB1-204ENST00000417122 NIPSNAP3BQ9BS92 247 aa11.16□□□□□ -0.62
ITGB1-204ENST00000417122 KMT2AQ03164 3969 aa11.15□□□□□ -0.62
ITGB1-204ENST00000417122 ZNF705GA8MUZ8 300 aaPredicted RBP11.15□□□□□ -0.62
ITGB1-204ENST00000417122 CLINT1Q14677 625 aa11.15□□□□□ -0.62
ITGB1-204ENST00000417122 ZNF586Q9NXT0 402 aa11.15□□□□□ -0.62
ITGB1-204ENST00000417122 PLA2G2EQ9NZK7 142 aa11.15□□□□□ -0.62
ITGB1-204ENST00000417122 PRAC2D3DTV9 90 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms