RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 TSPAN13O95857 204 aa12.63□□□□□ -0.39
PHRF1-203ENST00000416188 AMBPP02760 352 aa12.63□□□□□ -0.39
PHRF1-203ENST00000416188 PYY3Q5JQD4 70 aa12.63□□□□□ -0.39
PHRF1-203ENST00000416188 Q8TAT8 98 aa12.63□□□□□ -0.39
PHRF1-203ENST00000416188 DEFB104AQ8WTQ1 72 aa12.63□□□□□ -0.39
PHRF1-203ENST00000416188 TRAV8-1A0A0A6YYK1 113 aa12.62□□□□□ -0.39
PHRF1-203ENST00000416188 A0A0U1RRA0 63 aa12.62□□□□□ -0.39
PHRF1-203ENST00000416188 ATP5L2Q7Z4Y8 100 aa12.62□□□□□ -0.39
PHRF1-203ENST00000416188 IGLV3-9A0A075B6K5 115 aa12.62□□□□□ -0.39
PHRF1-203ENST00000416188 CD28P10747 220 aa12.62□□□□□ -0.39
PHRF1-203ENST00000416188 USMG5Q96IX5 58 aa12.62□□□□□ -0.39
PHRF1-203ENST00000416188 IGFL4Q6B9Z1 124 aa12.62□□□□□ -0.39
PHRF1-203ENST00000416188 TDGF1P3P51864 188 aa12.62□□□□□ -0.39
PHRF1-203ENST00000416188 ERVK11-1P61568 191 aa12.62□□□□□ -0.39
PHRF1-203ENST00000416188 NDUFS6O75380 124 aaKnown RBP12.61□□□□□ -0.39
PHRF1-203ENST00000416188 Q8NA96 180 aa12.61□□□□□ -0.39
PHRF1-203ENST00000416188 ADAMTS9Q9P2N4 1935 aa12.61□□□□□ -0.39
PHRF1-203ENST00000416188 SRRM4A7MD48 611 aaKnown RBP12.61□□□□□ -0.39
PHRF1-203ENST00000416188 MALP21145 153 aa12.61□□□□□ -0.39
PHRF1-203ENST00000416188 ZNF124Q15973 351 aa12.61□□□□□ -0.39
PHRF1-203ENST00000416188 C5orf30Q96GV9 206 aa12.61□□□□□ -0.39
PHRF1-203ENST00000416188 LYZL1Q6UWQ5 148 aa12.61□□□□□ -0.39
PHRF1-203ENST00000416188 ZNRD1Q9P1U0 126 aa12.61□□□□□ -0.39
PHRF1-203ENST00000416188 HELZP42694 1942 aaKnown RBP12.61□□□□□ -0.39
PHRF1-203ENST00000416188 TMEM249Q2WGJ8 235 aa12.61□□□□□ -0.39
PHRF1-203ENST00000416188 CD300EQ496F6 205 aaPredicted RBP12.61□□□□□ -0.39
PHRF1-203ENST00000416188 CHCHD1Q96BP2 118 aaKnown RBP12.61□□□□□ -0.39
PHRF1-203ENST00000416188 CHCHD5Q9BSY4 110 aa12.61□□□□□ -0.39
PHRF1-203ENST00000416188 IGF2RP11717 2491 aa12.61□□□□□ -0.39
PHRF1-203ENST00000416188 D6R8Y8 96 aa12.6□□□□□ -0.39
PHRF1-203ENST00000416188 SPSB3Q6PJ21 355 aa12.6□□□□□ -0.39
PHRF1-203ENST00000416188 Q6ZS49 121 aa12.6□□□□□ -0.39
PHRF1-203ENST00000416188 C1orf122Q6ZSJ8 110 aa12.6□□□□□ -0.39
PHRF1-203ENST00000416188 ZNF524Q96C55 264 aa12.6□□□□□ -0.39
PHRF1-203ENST00000416188 CHTOPQ9Y3Y2 248 aaKnown RBP12.6□□□□□ -0.39
PHRF1-203ENST00000416188 ASCL4Q6XD76 172 aa12.6□□□□□ -0.39
PHRF1-203ENST00000416188 UBE2DNLQ8IWF7 75 aa12.6□□□□□ -0.39
PHRF1-203ENST00000416188 IGHV3-64A0A075B6Q5 118 aa12.6□□□□□ -0.39
PHRF1-203ENST00000416188 IGHV4-30-2A0A087WSY4 118 aa12.6□□□□□ -0.39
PHRF1-203ENST00000416188 TRAV2A0A0B4J234 112 aa12.59□□□□□ -0.39
PHRF1-203ENST00000416188 A0A1B0GW64 132 aa12.59□□□□□ -0.39
PHRF1-203ENST00000416188 HOXA3O43365 443 aaPredicted RBP12.59□□□□□ -0.39
PHRF1-203ENST00000416188 ZNF138P52744 262 aa12.59□□□□□ -0.39
PHRF1-203ENST00000416188 ZNF815PA8K554 130 aa12.59□□□□□ -0.39
PHRF1-203ENST00000416188 RNASE2P10153 161 aaKnown RBP12.59□□□□□ -0.39
PHRF1-203ENST00000416188 RPL35AP18077 110 aaKnown RBP12.59□□□□□ -0.39
PHRF1-203ENST00000416188 DAZAP2Q15038 168 aaPredicted RBP12.59□□□□□ -0.39
PHRF1-203ENST00000416188 RNF182Q8N6D2 247 aa12.59□□□□□ -0.39
PHRF1-203ENST00000416188 BEND2Q8NDZ0 799 aa12.59□□□□□ -0.39
PHRF1-203ENST00000416188 IGKCP01834 107 aa12.59□□□□□ -0.39
PHRF1-203ENST00000416188 COL4A4P53420 1690 aaPredicted RBP12.59□□□□□ -0.39
PHRF1-203ENST00000416188 HIVEP2P31629 2446 aa12.59□□□□□ -0.39
PHRF1-203ENST00000416188 IGHV3-73A0A0B4J1V6 119 aa12.59□□□□□ -0.39
PHRF1-203ENST00000416188 IGKV1-6A0A0C4DH72 117 aa12.59□□□□□ -0.39
PHRF1-203ENST00000416188 FCN3O75636 299 aa12.59□□□□□ -0.39
PHRF1-203ENST00000416188 ZNF843Q8N446 348 aa12.59□□□□□ -0.39
PHRF1-203ENST00000416188 IGHV4-61A0A0C4DH41 118 aa12.58□□□□□ -0.39
PHRF1-203ENST00000416188 LOXP28300 417 aaPredicted RBP12.58□□□□□ -0.39
PHRF1-203ENST00000416188 TRAV12-3A0A0B4J271 114 aa12.58□□□□□ -0.4
PHRF1-203ENST00000416188 FXYD7P58549 80 aa12.58□□□□□ -0.4
PHRF1-203ENST00000416188 YLPM1P49750 1951 aaKnown RBP12.58□□□□□ -0.4
PHRF1-203ENST00000416188 TRBV7-1A0A0A6YYK4 115 aa12.58□□□□□ -0.4
PHRF1-203ENST00000416188 FNDC4Q9H6D8 234 aaPredicted RBP12.58□□□□□ -0.4
PHRF1-203ENST00000416188 C9orf139Q6ZV77 190 aa12.58□□□□□ -0.4
PHRF1-203ENST00000416188 TMEM256Q8N2U0 113 aa12.58□□□□□ -0.4
PHRF1-203ENST00000416188 PLXND1Q9Y4D7 1925 aa12.58□□□□□ -0.4
PHRF1-203ENST00000416188 RBMY1BA6NDE4 496 aaKnown RBP12.57□□□□□ -0.4
PHRF1-203ENST00000416188 RBMY1EA6NEQ0 496 aaKnown RBP12.57□□□□□ -0.4
PHRF1-203ENST00000416188 IGHV4-39P01824 125 aa12.57□□□□□ -0.4
PHRF1-203ENST00000416188 RBMY1DP0C7P1 496 aaKnown RBP12.57□□□□□ -0.4
PHRF1-203ENST00000416188 RBMY1A1P0DJD3 496 aaKnown RBP12.57□□□□□ -0.4
PHRF1-203ENST00000416188 RBMY1CP0DJD4 496 aa12.57□□□□□ -0.4
PHRF1-203ENST00000416188 LCN12Q6JVE5 192 aa12.57□□□□□ -0.4
PHRF1-203ENST00000416188 SYNJ2BPP57105 145 aa12.57□□□□□ -0.4
PHRF1-203ENST00000416188 IGHV2-5P01817 119 aa12.57□□□□□ -0.4
PHRF1-203ENST00000416188 ZNF876PQ49A33 203 aa12.57□□□□□ -0.4
PHRF1-203ENST00000416188 C10orf126Q8N4M7 172 aa12.57□□□□□ -0.4
PHRF1-203ENST00000416188 FAM223BA6NKX1 122 aa12.57□□□□□ -0.4
PHRF1-203ENST00000416188 FAM223AQ8IWN6 122 aa12.57□□□□□ -0.4
PHRF1-203ENST00000416188 DUX4L9Q6RFH8 374 aaPredicted RBP12.56□□□□□ -0.4
PHRF1-203ENST00000416188 NUP35Q8NFH5 326 aa12.56□□□□□ -0.4
PHRF1-203ENST00000416188 RCHY1Q96PM5 261 aa12.56□□□□□ -0.4
PHRF1-203ENST00000416188 C9JQL5 133 aa12.56□□□□□ -0.4
PHRF1-203ENST00000416188 LAGE3Q14657 143 aa12.56□□□□□ -0.4
PHRF1-203ENST00000416188 COL4A3Q01955 1670 aa12.56□□□□□ -0.4
PHRF1-203ENST00000416188 SH2D1AO60880 128 aa12.56□□□□□ -0.4
PHRF1-203ENST00000416188 PLNP26678 52 aa12.56□□□□□ -0.4
PHRF1-203ENST00000416188 RSPO3Q9BXY4 272 aaPredicted RBP12.56□□□□□ -0.4
PHRF1-203ENST00000416188 CSPG4Q6UVK1 2322 aa12.56□□□□□ -0.4
PHRF1-203ENST00000416188 E9PQ18 207 aa12.56□□□□□ -0.4
PHRF1-203ENST00000416188 SRSF4Q08170 494 aaKnown RBP12.56□□□□□ -0.4
PHRF1-203ENST00000416188 ACTL10Q5JWF8 245 aa12.56□□□□□ -0.4
PHRF1-203ENST00000416188 LINC00479Q96M42 142 aa12.56□□□□□ -0.4
PHRF1-203ENST00000416188 HEATR5AQ86XA9 2040 aa12.56□□□□□ -0.4
PHRF1-203ENST00000416188 ADARB2-AS1A8MUL3 147 aa12.55□□□□□ -0.4
PHRF1-203ENST00000416188 A0A1W2PPI3 338 aa12.55□□□□□ -0.4
PHRF1-203ENST00000416188 ZNF415Q09FC8 603 aa12.55□□□□□ -0.4
PHRF1-203ENST00000416188 TEX36Q5VZQ5 186 aa12.55□□□□□ -0.4
PHRF1-203ENST00000416188 ORAOV1Q8WV07 137 aa12.55□□□□□ -0.4
PHRF1-203ENST00000416188 RIPPLY3P57055 190 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms