RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 PRB4P10163 310 aaPredicted RBP12.68□□□□□ -0.38
LSM5-204ENST00000409909 S100A11P31949 105 aa12.68□□□□□ -0.38
LSM5-204ENST00000409909 EMP1P54849 157 aa12.68□□□□□ -0.38
LSM5-204ENST00000409909 PRR20EP86478 221 aa12.68□□□□□ -0.38
LSM5-204ENST00000409909 PRR20CP86479 221 aa12.68□□□□□ -0.38
LSM5-204ENST00000409909 PRR20DP86480 221 aa12.68□□□□□ -0.38
LSM5-204ENST00000409909 PRR20BP86481 221 aa12.68□□□□□ -0.38
LSM5-204ENST00000409909 PRR20AP86496 221 aa12.68□□□□□ -0.38
LSM5-204ENST00000409909 MIC13Q5XKP0 118 aa12.68□□□□□ -0.38
LSM5-204ENST00000409909 GPN1Q9HCN4 374 aaPredicted RBP12.68□□□□□ -0.38
LSM5-204ENST00000409909 M0R2Z0 102 aa12.67□□□□□ -0.38
LSM5-204ENST00000409909 CRXO43186 299 aaPredicted RBP12.67□□□□□ -0.38
LSM5-204ENST00000409909 TCTAP57738 103 aa12.67□□□□□ -0.38
LSM5-204ENST00000409909 RAB31Q13636 194 aa12.67□□□□□ -0.38
LSM5-204ENST00000409909 OPCMLQ14982 345 aa12.67□□□□□ -0.38
LSM5-204ENST00000409909 PSG3Q16557 428 aa12.67□□□□□ -0.38
LSM5-204ENST00000409909 C10orf113Q5VZT2 155 aa12.67□□□□□ -0.38
LSM5-204ENST00000409909 LRRC20Q8TCA0 184 aa12.67□□□□□ -0.38
LSM5-204ENST00000409909 IGF2BP2-AS1Q96M15 143 aa12.67□□□□□ -0.38
LSM5-204ENST00000409909 DNAJC4Q9NNZ3 241 aa12.67□□□□□ -0.38
LSM5-204ENST00000409909 RNF24Q9Y225 148 aa12.67□□□□□ -0.38
LSM5-204ENST00000409909 GOLT1BQ9Y3E0 138 aa12.67□□□□□ -0.38
LSM5-204ENST00000409909 RFNGQ9Y644 331 aa12.67□□□□□ -0.38
LSM5-204ENST00000409909 DNAH10Q8IVF4 4471 aa12.67□□□□□ -0.38
LSM5-204ENST00000409909 UBE2L5PA0A1B0GUS4 154 aa12.66□□□□□ -0.38
LSM5-204ENST00000409909 TMEM189A5PLL7 270 aa12.66□□□□□ -0.38
LSM5-204ENST00000409909 INMT-MINDY4F8WBC2 141 aa12.66□□□□□ -0.38
LSM5-204ENST00000409909 SPINK13Q1W4C9 94 aa12.66□□□□□ -0.38
LSM5-204ENST00000409909 STX12Q86Y82 276 aa12.66□□□□□ -0.38
LSM5-204ENST00000409909 OR8A1Q8NGG7 326 aa12.66□□□□□ -0.38
LSM5-204ENST00000409909 DEFB131BA0A096LNP1 70 aa12.65□□□□□ -0.38
LSM5-204ENST00000409909 TRAV5A0A0B4J249 113 aa12.65□□□□□ -0.38
LSM5-204ENST00000409909 H3BTX0 84 aa12.65□□□□□ -0.38
LSM5-204ENST00000409909 PRM2P04554 102 aa12.65□□□□□ -0.38
LSM5-204ENST00000409909 SPART-AS1P0CW21 52 aa12.65□□□□□ -0.38
LSM5-204ENST00000409909 RPL29P47914 159 aaKnown RBP12.65□□□□□ -0.38
LSM5-204ENST00000409909 HBG1P69891 147 aa12.65□□□□□ -0.38
LSM5-204ENST00000409909 HBG2P69892 147 aa12.65□□□□□ -0.38
LSM5-204ENST00000409909 Q6ZRG5 221 aa12.65□□□□□ -0.38
LSM5-204ENST00000409909 BPIFA4PQ86YQ2 179 aa12.65□□□□□ -0.38
LSM5-204ENST00000409909 CHAC2Q8WUX2 184 aa12.65□□□□□ -0.38
LSM5-204ENST00000409909 MARVELD1Q9BSK0 173 aa12.65□□□□□ -0.38
LSM5-204ENST00000409909 ZNF331Q9NQX6 463 aaPredicted RBP12.65□□□□□ -0.38
LSM5-204ENST00000409909 DKK2Q9UBU2 259 aa12.65□□□□□ -0.38
LSM5-204ENST00000409909 DNAH6Q9C0G6 4158 aa12.65□□□□□ -0.38
LSM5-204ENST00000409909 IGHV4-4A0A075B6R2 117 aa12.64□□□□□ -0.39
LSM5-204ENST00000409909 H0YIZ8 118 aa12.64□□□□□ -0.39
LSM5-204ENST00000409909 H3BQ15 152 aa12.64□□□□□ -0.39
LSM5-204ENST00000409909 SLC17A3O00476 420 aa12.64□□□□□ -0.39
LSM5-204ENST00000409909 PRAF2O60831 178 aa12.64□□□□□ -0.39
LSM5-204ENST00000409909 HBE1P02100 147 aa12.64□□□□□ -0.39
LSM5-204ENST00000409909 IGLC2P0DOY2 106 aa12.64□□□□□ -0.39
LSM5-204ENST00000409909 CXCL2P19875 107 aa12.64□□□□□ -0.39
LSM5-204ENST00000409909 HIST1H1AQ02539 215 aaPredicted RBP12.64□□□□□ -0.39
LSM5-204ENST00000409909 NHLH2Q02577 135 aa12.64□□□□□ -0.39
LSM5-204ENST00000409909 BAXQ07812 192 aa12.64□□□□□ -0.39
LSM5-204ENST00000409909 ATP6V1FQ16864 119 aa12.64□□□□□ -0.39
LSM5-204ENST00000409909 LCN15Q6UWW0 184 aa12.64□□□□□ -0.39
LSM5-204ENST00000409909 BAP18Q8IXM2 172 aa12.64□□□□□ -0.39
LSM5-204ENST00000409909 RPUSD4Q96CM3 377 aaKnown RBP12.64□□□□□ -0.39
LSM5-204ENST00000409909 NMES1Q9C002 83 aa12.64□□□□□ -0.39
LSM5-204ENST00000409909 SLC39A9Q9NUM3 307 aa12.64□□□□□ -0.39
LSM5-204ENST00000409909 PLA2G2EQ9NZK7 142 aa12.64□□□□□ -0.39
LSM5-204ENST00000409909 OR5AC2Q9NZP5 309 aa12.64□□□□□ -0.39
LSM5-204ENST00000409909 TRAV12-2A0A075B6T6 113 aa12.63□□□□□ -0.39
LSM5-204ENST00000409909 LOC102723971A0A1B0GUV8 181 aa12.63□□□□□ -0.39
LSM5-204ENST00000409909 AMBPP02760 352 aa12.63□□□□□ -0.39
LSM5-204ENST00000409909 FGF7P21781 194 aa12.63□□□□□ -0.39
LSM5-204ENST00000409909 H2BFSP57053 126 aa12.63□□□□□ -0.39
LSM5-204ENST00000409909 B2MP61769 119 aa12.63□□□□□ -0.39
LSM5-204ENST00000409909 RRN3P1Q2M238 152 aa12.63□□□□□ -0.39
LSM5-204ENST00000409909 FAM222AQ5U5X8 452 aa12.63□□□□□ -0.39
LSM5-204ENST00000409909 OR1L4Q8NGR5 311 aa12.63□□□□□ -0.39
LSM5-204ENST00000409909 SAT2Q96F10 170 aaPredicted RBP12.63□□□□□ -0.39
LSM5-204ENST00000409909 RNF126Q9BV68 326 aa12.63□□□□□ -0.39
LSM5-204ENST00000409909 BOLA2-SMG1P6H3BVE0 249 aa12.62□□□□□ -0.39
LSM5-204ENST00000409909 INSP01308 110 aa12.62□□□□□ -0.39
LSM5-204ENST00000409909 RHOBP62745 196 aa12.62□□□□□ -0.39
LSM5-204ENST00000409909 LRRC37A5PQ49AS3 106 aa12.62□□□□□ -0.39
LSM5-204ENST00000409909 PFDN5Q99471 154 aa12.62□□□□□ -0.39
LSM5-204ENST00000409909 SLC50A1Q9BRV3 221 aa12.62□□□□□ -0.39
LSM5-204ENST00000409909 TMEM208Q9BTX3 173 aa12.62□□□□□ -0.39
LSM5-204ENST00000409909 YTHDF2Q9Y5A9 579 aaKnown RBP12.62□□□□□ -0.39
LSM5-204ENST00000409909 PXMP4Q9Y6I8 212 aa12.62□□□□□ -0.39
LSM5-204ENST00000409909 ZNF705GA8MUZ8 300 aaPredicted RBP12.61□□□□□ -0.39
LSM5-204ENST00000409909 PRAC2D3DTV9 90 aa12.61□□□□□ -0.39
LSM5-204ENST00000409909 E5RGE8 158 aa12.61□□□□□ -0.39
LSM5-204ENST00000409909 RLN2P04090 185 aa12.61□□□□□ -0.39
LSM5-204ENST00000409909 OR5C1Q8NGR4 320 aa12.61□□□□□ -0.39
LSM5-204ENST00000409909 NPCDR1Q9BY65 106 aa12.61□□□□□ -0.39
LSM5-204ENST00000409909 BATF3Q9NR55 127 aa12.61□□□□□ -0.39
LSM5-204ENST00000409909 MPDU1O75352 247 aa12.6□□□□□ -0.39
LSM5-204ENST00000409909 DEFA1P59665 94 aa12.6□□□□□ -0.39
LSM5-204ENST00000409909 DEFA3P59666 94 aa12.6□□□□□ -0.39
LSM5-204ENST00000409909 CYCSP99999 105 aaKnown RBP12.6□□□□□ -0.39
LSM5-204ENST00000409909 GCSAMLQ5JQS6 135 aa12.6□□□□□ -0.39
LSM5-204ENST00000409909 THAP6Q8TBB0 222 aa12.6□□□□□ -0.39
LSM5-204ENST00000409909 NIPSNAP3BQ9BS92 247 aa12.6□□□□□ -0.39
LSM5-204ENST00000409909 ZNF586Q9NXT0 402 aa12.6□□□□□ -0.39
LSM5-204ENST00000409909 AZU1P20160 251 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms