RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 OR11H7Q8NGC8 314 aa13.04□□□□□ -0.32
PDLIM2-206ENST00000409141 WDR61Q9GZS3 305 aaKnown RBP13.04□□□□□ -0.32
PDLIM2-206ENST00000409141 ZNF705EA8MWA4 302 aaPredicted RBP13.03□□□□□ -0.32
PDLIM2-206ENST00000409141 CXCL2P19875 107 aa13.03□□□□□ -0.32
PDLIM2-206ENST00000409141 HLA-DMBP28068 263 aa13.03□□□□□ -0.32
PDLIM2-206ENST00000409141 PMS2P11Q13670 270 aa13.03□□□□□ -0.32
PDLIM2-206ENST00000409141 PSG3Q16557 428 aa13.03□□□□□ -0.32
PDLIM2-206ENST00000409141 SMIM3Q9BZL3 60 aa13.03□□□□□ -0.32
PDLIM2-206ENST00000409141 C11orf68Q9H3H3 251 aaKnown RBP13.03□□□□□ -0.32
PDLIM2-206ENST00000409141 KMT2CQ8NEZ4 4911 aaKnown RBP13.02□□□□□ -0.32
PDLIM2-206ENST00000409141 TENM2Q9NT68 2774 aa13.02□□□□□ -0.33
PDLIM2-206ENST00000409141 CXorf65A6NEN9 183 aa13.02□□□□□ -0.33
PDLIM2-206ENST00000409141 C17orf112F2Z3M2 114 aa13.02□□□□□ -0.33
PDLIM2-206ENST00000409141 H3BTX0 84 aa13.02□□□□□ -0.33
PDLIM2-206ENST00000409141 DUSP14O95147 198 aaKnown RBP13.02□□□□□ -0.33
PDLIM2-206ENST00000409141 ZNF705DP0CH99 300 aaPredicted RBP13.02□□□□□ -0.33
PDLIM2-206ENST00000409141 ZNF705BP0CI00 300 aaPredicted RBP13.02□□□□□ -0.33
PDLIM2-206ENST00000409141 MIFP14174 115 aa13.02□□□□□ -0.33
PDLIM2-206ENST00000409141 GCSAMLQ5JQS6 135 aa13.02□□□□□ -0.33
PDLIM2-206ENST00000409141 SLC50A1Q9BRV3 221 aa13.02□□□□□ -0.33
PDLIM2-206ENST00000409141 SLC35B3Q9H1N7 401 aa13.02□□□□□ -0.33
PDLIM2-206ENST00000409141 KCNIP2Q9NS61 270 aa13.02□□□□□ -0.33
PDLIM2-206ENST00000409141 X6R8D5 127 aa13.02□□□□□ -0.33
PDLIM2-206ENST00000409141 CSMD3Q7Z407 3707 aa13.01□□□□□ -0.33
PDLIM2-206ENST00000409141 IGHV4-28A0A0C4DH34 117 aa13.01□□□□□ -0.33
PDLIM2-206ENST00000409141 H3BQ15 152 aa13.01□□□□□ -0.33
PDLIM2-206ENST00000409141 IFNA5P01569 189 aa13.01□□□□□ -0.33
PDLIM2-206ENST00000409141 CNN1P51911 297 aaKnown RBP13.01□□□□□ -0.33
PDLIM2-206ENST00000409141 Q8NAQ8 132 aa13.01□□□□□ -0.33
PDLIM2-206ENST00000409141 MFFQ9GZY8 342 aa13.01□□□□□ -0.33
PDLIM2-206ENST00000409141 HRH4Q9H3N8 390 aa13.01□□□□□ -0.33
PDLIM2-206ENST00000409141 ZNF331Q9NQX6 463 aaPredicted RBP13.01□□□□□ -0.33
PDLIM2-206ENST00000409141 IGLC2P0DOY2 106 aa13□□□□□ -0.33
PDLIM2-206ENST00000409141 GUK1Q16774 197 aa13□□□□□ -0.33
PDLIM2-206ENST00000409141 C11orf45Q8TAV5 145 aa13□□□□□ -0.33
PDLIM2-206ENST00000409141 SCGB1C1Q8TD33 95 aa13□□□□□ -0.33
PDLIM2-206ENST00000409141 RBMY1A1P0DJD3 496 aaKnown RBP12.99□□□□□ -0.33
PDLIM2-206ENST00000409141 RBMY1CP0DJD4 496 aa12.99□□□□□ -0.33
PDLIM2-206ENST00000409141 OXA1LQ15070 435 aa12.99□□□□□ -0.33
PDLIM2-206ENST00000409141 RBMY1FQ15415 496 aaKnown RBP12.99□□□□□ -0.33
PDLIM2-206ENST00000409141 RPUSD4Q96CM3 377 aaKnown RBP12.99□□□□□ -0.33
PDLIM2-206ENST00000409141 IGHV3OR16-12A0A075B7B8 117 aa12.98□□□□□ -0.33
PDLIM2-206ENST00000409141 A8MTW9 85 aa12.98□□□□□ -0.33
PDLIM2-206ENST00000409141 SLC17A3O00476 420 aa12.98□□□□□ -0.33
PDLIM2-206ENST00000409141 PRB4P10163 310 aaPredicted RBP12.98□□□□□ -0.33
PDLIM2-206ENST00000409141 HIST1H1AQ02539 215 aaPredicted RBP12.98□□□□□ -0.33
PDLIM2-206ENST00000409141 AMTNQ6UX39 209 aa12.98□□□□□ -0.33
PDLIM2-206ENST00000409141 OR8A1Q8NGG7 326 aa12.98□□□□□ -0.33
PDLIM2-206ENST00000409141 SAT2Q96F10 170 aaPredicted RBP12.98□□□□□ -0.33
PDLIM2-206ENST00000409141 WFDC1Q9HC57 220 aa12.98□□□□□ -0.33
PDLIM2-206ENST00000409141 ZNF586Q9NXT0 402 aa12.98□□□□□ -0.33
PDLIM2-206ENST00000409141 TMEM14CQ9P0S9 112 aa12.98□□□□□ -0.33
PDLIM2-206ENST00000409141 ZNF705FA8MVS1 300 aaPredicted RBP12.97□□□□□ -0.33
PDLIM2-206ENST00000409141 GIPP09681 153 aaPredicted RBP12.97□□□□□ -0.33
PDLIM2-206ENST00000409141 NANOS2P60321 138 aaKnown RBP12.97□□□□□ -0.33
PDLIM2-206ENST00000409141 RHOBP62745 196 aa12.97□□□□□ -0.33
PDLIM2-206ENST00000409141 ZNF705AQ6ZN79 300 aaPredicted RBP12.97□□□□□ -0.33
PDLIM2-206ENST00000409141 ASB13Q8WXK3 278 aa12.97□□□□□ -0.33
PDLIM2-206ENST00000409141 STARD9Q9P2P6 4700 aa12.97□□□□□ -0.33
PDLIM2-206ENST00000409141 HIST1H1EP10412 219 aaKnown RBP12.97□□□□□ -0.33
PDLIM2-206ENST00000409141 MIR17HGQ75NE6 70 aa12.97□□□□□ -0.33
PDLIM2-206ENST00000409141 PPP1R14DQ9NXH3 145 aa12.97□□□□□ -0.33
PDLIM2-206ENST00000409141 NUPR2A6NF83 97 aa12.96□□□□□ -0.34
PDLIM2-206ENST00000409141 M0R2Z0 102 aa12.96□□□□□ -0.34
PDLIM2-206ENST00000409141 PYYP10082 97 aa12.96□□□□□ -0.34
PDLIM2-206ENST00000409141 Q5BKY6 102 aa12.96□□□□□ -0.34
PDLIM2-206ENST00000409141 FFAR4Q5NUL3 377 aa12.96□□□□□ -0.34
PDLIM2-206ENST00000409141 CEMP1Q6PRD7 247 aaPredicted RBP12.96□□□□□ -0.34
PDLIM2-206ENST00000409141 NEU1Q99519 415 aa12.96□□□□□ -0.34
PDLIM2-206ENST00000409141 SLC25A2Q9BXI2 301 aa12.96□□□□□ -0.34
PDLIM2-206ENST00000409141 PARD6GQ9BYG4 376 aaPredicted RBP12.96□□□□□ -0.34
PDLIM2-206ENST00000409141 GOLT1BQ9Y3E0 138 aa12.96□□□□□ -0.34
PDLIM2-206ENST00000409141 TIMM9Q9Y5J7 89 aa12.96□□□□□ -0.34
PDLIM2-206ENST00000409141 TRBV19A0A075B6N1 114 aa12.95□□□□□ -0.34
PDLIM2-206ENST00000409141 AMBPP02760 352 aa12.95□□□□□ -0.34
PDLIM2-206ENST00000409141 SPINK13Q1W4C9 94 aa12.95□□□□□ -0.34
PDLIM2-206ENST00000409141 C1orf158Q8N1D5 194 aa12.95□□□□□ -0.34
PDLIM2-206ENST00000409141 PHLDA1Q8WV24 401 aaPredicted RBP12.95□□□□□ -0.34
PDLIM2-206ENST00000409141 IGF2BP2-AS1Q96M15 143 aa12.95□□□□□ -0.34
PDLIM2-206ENST00000409141 MRPL32Q9BYC8 188 aaKnown RBP12.95□□□□□ -0.34
PDLIM2-206ENST00000409141 FUT9Q9Y231 359 aa12.95□□□□□ -0.34
PDLIM2-206ENST00000409141 SMIM9A6NGZ8 99 aa12.94□□□□□ -0.34
PDLIM2-206ENST00000409141 PRAC2D3DTV9 90 aa12.94□□□□□ -0.34
PDLIM2-206ENST00000409141 ZNF253O75346 499 aa12.94□□□□□ -0.34
PDLIM2-206ENST00000409141 OR10J6PQ8NGY7 276 aa12.94□□□□□ -0.34
PDLIM2-206ENST00000409141 BLNKQ8WV28 456 aa12.94□□□□□ -0.34
PDLIM2-206ENST00000409141 FAM167A-AS1Q96KT0 104 aa12.94□□□□□ -0.34
PDLIM2-206ENST00000409141 AQP10Q96PS8 301 aa12.94□□□□□ -0.34
PDLIM2-206ENST00000409141 OR51M1Q9H341 326 aa12.94□□□□□ -0.34
PDLIM2-206ENST00000409141 LCE6AA0A183 80 aa12.93□□□□□ -0.34
PDLIM2-206ENST00000409141 TMEM208Q9BTX3 173 aa12.93□□□□□ -0.34
PDLIM2-206ENST00000409141 KLK5Q9Y337 293 aaPredicted RBP12.93□□□□□ -0.34
PDLIM2-206ENST00000409141 RFNGQ9Y644 331 aa12.93□□□□□ -0.34
PDLIM2-206ENST00000409141 BOLA2-SMG1P6H3BVE0 249 aa12.92□□□□□ -0.34
PDLIM2-206ENST00000409141 NDUFB4O95168 129 aa12.92□□□□□ -0.34
PDLIM2-206ENST00000409141 INSP01308 110 aa12.92□□□□□ -0.34
PDLIM2-206ENST00000409141 PDE6HQ13956 83 aa12.92□□□□□ -0.34
PDLIM2-206ENST00000409141 INO80EQ8NBZ0 244 aaPredicted RBP12.92□□□□□ -0.34
PDLIM2-206ENST00000409141 OR2T35Q8NGX2 323 aa12.92□□□□□ -0.34
PDLIM2-206ENST00000409141 PAXXQ9BUH6 204 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms