RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 TIMM23O14925 209 aa12.02□□□□□ -0.49
LIMK2-204ENST00000406516 IGKV1-17P01599 117 aa12.02□□□□□ -0.49
LIMK2-204ENST00000406516 PAX2Q02962 417 aa12.02□□□□□ -0.49
LIMK2-204ENST00000406516 CT83Q5H943 113 aa12.02□□□□□ -0.49
LIMK2-204ENST00000406516 LDLRAD2Q5SZI1 272 aa12.02□□□□□ -0.49
LIMK2-204ENST00000406516 ASCL2Q99929 193 aa12.02□□□□□ -0.49
LIMK2-204ENST00000406516 HNRNPA3P51991 378 aaKnown RBP12.02□□□□□ -0.49
LIMK2-204ENST00000406516 RBPMS2Q6ZRY4 209 aaKnown RBP12.02□□□□□ -0.49
LIMK2-204ENST00000406516 BTF3P20290 206 aaKnown RBP12.01□□□□□ -0.49
LIMK2-204ENST00000406516 OR8B3Q8NGG8 313 aa12.01□□□□□ -0.49
LIMK2-204ENST00000406516 C17orf77Q96MU5 243 aa12.01□□□□□ -0.49
LIMK2-204ENST00000406516 OR8B2Q96RD0 313 aa12.01□□□□□ -0.49
LIMK2-204ENST00000406516 MAP1AP78559 2803 aaPredicted RBP12.01□□□□□ -0.49
LIMK2-204ENST00000406516 CYSRT1A8MQ03 144 aa12.01□□□□□ -0.49
LIMK2-204ENST00000406516 TMEM14CQ9P0S9 112 aa12.01□□□□□ -0.49
LIMK2-204ENST00000406516 HILPDAQ9Y5L2 63 aa12.01□□□□□ -0.49
LIMK2-204ENST00000406516 S4R3C0 116 aa12.01□□□□□ -0.49
LIMK2-204ENST00000406516 C2orf70A6NJV1 201 aa12□□□□□ -0.49
LIMK2-204ENST00000406516 DLEU1O43261 78 aa12□□□□□ -0.49
LIMK2-204ENST00000406516 IGLV2-11P01706 119 aa12□□□□□ -0.49
LIMK2-204ENST00000406516 KLHDC1Q8N7A1 406 aa12□□□□□ -0.49
LIMK2-204ENST00000406516 LY6LH3BQJ8 138 aa12□□□□□ -0.49
LIMK2-204ENST00000406516 K7EIM0 57 aa12□□□□□ -0.49
LIMK2-204ENST00000406516 IGHV4-39P01824 125 aa12□□□□□ -0.49
LIMK2-204ENST00000406516 COL5A1-AS1Q5SY13 56 aa12□□□□□ -0.49
LIMK2-204ENST00000406516 SPATA12Q7Z6I5 190 aa12□□□□□ -0.49
LIMK2-204ENST00000406516 RAB1BQ9H0U4 201 aa12□□□□□ -0.49
LIMK2-204ENST00000406516 CHEK1O14757 476 aa11.99□□□□□ -0.49
LIMK2-204ENST00000406516 NPSP0C0P6 89 aa11.99□□□□□ -0.49
LIMK2-204ENST00000406516 KLF17Q5JT82 389 aaPredicted RBP11.99□□□□□ -0.49
LIMK2-204ENST00000406516 CYB5R2Q6BCY4 276 aa11.99□□□□□ -0.49
LIMK2-204ENST00000406516 GFRA4Q9GZZ7 299 aa11.99□□□□□ -0.49
LIMK2-204ENST00000406516 SOX21Q9Y651 276 aaPredicted RBP11.99□□□□□ -0.49
LIMK2-204ENST00000406516 ARHGAP32A7KAX9 2087 aa11.99□□□□□ -0.49
LIMK2-204ENST00000406516 ARF6P62330 175 aa11.99□□□□□ -0.49
LIMK2-204ENST00000406516 DEFB113Q30KQ7 82 aa11.99□□□□□ -0.49
LIMK2-204ENST00000406516 RBM14Q96PK6 669 aaKnown RBP11.99□□□□□ -0.49
LIMK2-204ENST00000406516 ANKRD17O75179 2603 aaKnown RBP11.99□□□□□ -0.49
LIMK2-204ENST00000406516 A0A1W2PRD5 423 aa11.98□□□□□ -0.49
LIMK2-204ENST00000406516 A0A1W2PRF3 423 aa11.98□□□□□ -0.49
LIMK2-204ENST00000406516 A0A1W2PRM7 423 aa11.98□□□□□ -0.49
LIMK2-204ENST00000406516 ATP5J2P56134 94 aa11.98□□□□□ -0.49
LIMK2-204ENST00000406516 LAMTOR2Q9Y2Q5 125 aa11.98□□□□□ -0.49
LIMK2-204ENST00000406516 TRAV9-2A0A087WT02 112 aa11.98□□□□□ -0.49
LIMK2-204ENST00000406516 NPIPB6E9PJ23 425 aa11.98□□□□□ -0.49
LIMK2-204ENST00000406516 LIPFP07098 398 aa11.98□□□□□ -0.49
LIMK2-204ENST00000406516 FAM120AOSQ5T036 256 aa11.98□□□□□ -0.49
LIMK2-204ENST00000406516 BPIFA4PQ86YQ2 179 aa11.98□□□□□ -0.49
LIMK2-204ENST00000406516 STPG4Q8N801 248 aa11.98□□□□□ -0.49
LIMK2-204ENST00000406516 ZC2HC1AQ96GY0 325 aa11.98□□□□□ -0.49
LIMK2-204ENST00000406516 SHANK2-AS3Q9BTD1 123 aa11.98□□□□□ -0.49
LIMK2-204ENST00000406516 GOLT1BQ9Y3E0 138 aa11.98□□□□□ -0.49
LIMK2-204ENST00000406516 TRBV19A0A075B6N1 114 aa11.97□□□□□ -0.49
LIMK2-204ENST00000406516 IGHV1-24A0A0C4DH33 117 aa11.97□□□□□ -0.49
LIMK2-204ENST00000406516 IL4P05112 153 aa11.97□□□□□ -0.49
LIMK2-204ENST00000406516 HTR1DP28221 377 aa11.97□□□□□ -0.49
LIMK2-204ENST00000406516 EFNA4P52798 201 aa11.97□□□□□ -0.49
LIMK2-204ENST00000406516 KLRD1Q13241 179 aa11.97□□□□□ -0.49
LIMK2-204ENST00000406516 LINC00173Q6ZV60 143 aa11.97□□□□□ -0.49
LIMK2-204ENST00000406516 OR4F17Q8NGA8 305 aa11.97□□□□□ -0.49
LIMK2-204ENST00000406516 CCDC168Q8NDH2 2452 aa11.97□□□□□ -0.49
LIMK2-204ENST00000406516 LOC102724200A0A096LPH7 203 aaPredicted RBP11.97□□□□□ -0.49
LIMK2-204ENST00000406516 NBR2O15453 112 aa11.97□□□□□ -0.49
LIMK2-204ENST00000406516 ZNF138P52744 262 aa11.97□□□□□ -0.49
LIMK2-204ENST00000406516 RNF5Q99942 180 aa11.97□□□□□ -0.49
LIMK2-204ENST00000406516 TMEM70Q9BUB7 260 aa11.97□□□□□ -0.49
LIMK2-204ENST00000406516 H3BRN7 92 aa11.96□□□□□ -0.49
LIMK2-204ENST00000406516 HLA-DRB1P01911 266 aa11.96□□□□□ -0.49
LIMK2-204ENST00000406516 IGLL1P15814 213 aa11.96□□□□□ -0.49
LIMK2-204ENST00000406516 TSPOP30536 169 aa11.96□□□□□ -0.49
LIMK2-204ENST00000406516 HES1Q14469 280 aa11.96□□□□□ -0.49
LIMK2-204ENST00000406516 FBLN7Q53RD9 439 aa11.96□□□□□ -0.49
LIMK2-204ENST00000406516 NEU4Q8WWR8 484 aaPredicted RBP11.96□□□□□ -0.49
LIMK2-204ENST00000406516 BEX4Q9NWD9 120 aaPredicted RBP11.96□□□□□ -0.49
LIMK2-204ENST00000406516 ZNF785A8K8V0 405 aa11.96□□□□□ -0.5
LIMK2-204ENST00000406516 HOXB4P17483 251 aaPredicted RBP11.96□□□□□ -0.5
LIMK2-204ENST00000406516 ZNF491Q8N8L2 437 aa11.96□□□□□ -0.5
LIMK2-204ENST00000406516 RNF125Q96EQ8 232 aa11.96□□□□□ -0.5
LIMK2-204ENST00000406516 FAM231BA6NCW3 169 aa11.95□□□□□ -0.5
LIMK2-204ENST00000406516 FOSL1P15407 271 aa11.95□□□□□ -0.5
LIMK2-204ENST00000406516 FCGR2BP31994 310 aaPredicted RBP11.95□□□□□ -0.5
LIMK2-204ENST00000406516 FAM162BQ5T6X4 162 aa11.95□□□□□ -0.5
LIMK2-204ENST00000406516 SIGLEC15Q6ZMC9 328 aa11.95□□□□□ -0.5
LIMK2-204ENST00000406516 BCL6BQ8N143 479 aaPredicted RBP11.95□□□□□ -0.5
LIMK2-204ENST00000406516 DPM3Q9P2X0 92 aa11.95□□□□□ -0.5
LIMK2-204ENST00000406516 M0R3E3 92 aa11.95□□□□□ -0.5
LIMK2-204ENST00000406516 APOHP02749 345 aaPredicted RBP11.95□□□□□ -0.5
LIMK2-204ENST00000406516 HINT1P49773 126 aaPredicted RBP11.95□□□□□ -0.5
LIMK2-204ENST00000406516 CHCHD1Q96BP2 118 aaKnown RBP11.95□□□□□ -0.5
LIMK2-204ENST00000406516 SRSF8Q9BRL6 282 aaKnown RBP11.95□□□□□ -0.5
LIMK2-204ENST00000406516 HAX1O00165 279 aa11.94□□□□□ -0.5
LIMK2-204ENST00000406516 LEPROTL1O95214 131 aa11.94□□□□□ -0.5
LIMK2-204ENST00000406516 ARMS2P0C7Q2 107 aa11.94□□□□□ -0.5
LIMK2-204ENST00000406516 LINC00614P0C842 121 aa11.94□□□□□ -0.5
LIMK2-204ENST00000406516 GAGE1Q13065 139 aa11.94□□□□□ -0.5
LIMK2-204ENST00000406516 LY6G5BQ8NDX9 201 aa11.94□□□□□ -0.5
LIMK2-204ENST00000406516 CFHR4Q92496 578 aa11.94□□□□□ -0.5
LIMK2-204ENST00000406516 TPPP3Q9BW30 176 aa11.94□□□□□ -0.5
LIMK2-204ENST00000406516 PSG8Q9UQ74 426 aa11.94□□□□□ -0.5
LIMK2-204ENST00000406516 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms