RNA–Protein interactions for RNA: ENST00000399959.6

DDX3X-201, Transcript of DEAD-box helicase 3 X-linked, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX3X, Length 5,399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-201ENST00000399959 TMEM126AQ9H061 195 aa11.09□□□□□ -0.63
DDX3X-201ENST00000399959 CLPSP04118 112 aa11.09□□□□□ -0.63
DDX3X-201ENST00000399959 MRPL35Q9NZE8 188 aaKnown RBP11.09□□□□□ -0.63
DDX3X-201ENST00000399959 TRGV2A0A075B6R0 118 aa11.09□□□□□ -0.63
DDX3X-201ENST00000399959 K7EN84 100 aa11.09□□□□□ -0.63
DDX3X-201ENST00000399959 MRPL14Q6P1L8 145 aaKnown RBP11.09□□□□□ -0.63
DDX3X-201ENST00000399959 ANKRD29Q8N6D5 301 aa11.09□□□□□ -0.63
DDX3X-201ENST00000399959 LY6G5BQ8NDX9 201 aa11.09□□□□□ -0.63
DDX3X-201ENST00000399959 NTN5Q8WTR8 489 aaPredicted RBP11.09□□□□□ -0.63
DDX3X-201ENST00000399959 METRNQ9UJH8 293 aa11.09□□□□□ -0.63
DDX3X-201ENST00000399959 H0YJW9 148 aa11.08□□□□□ -0.63
DDX3X-201ENST00000399959 ATP1A1-AS1Q5TC04 95 aa11.08□□□□□ -0.63
DDX3X-201ENST00000399959 C2orf66Q6UXQ4 117 aa11.08□□□□□ -0.63
DDX3X-201ENST00000399959 PRADC1Q9BSG0 188 aa11.08□□□□□ -0.63
DDX3X-201ENST00000399959 TIMM23O14925 209 aa11.08□□□□□ -0.64
DDX3X-201ENST00000399959 HLA-DMBP28068 263 aa11.08□□□□□ -0.64
DDX3X-201ENST00000399959 WIPF3A6NGB9 483 aa11.08□□□□□ -0.64
DDX3X-201ENST00000399959 DEFB123Q8N688 67 aa11.08□□□□□ -0.64
DDX3X-201ENST00000399959 TDRD6O60522 2096 aaKnown RBP11.08□□□□□ -0.64
DDX3X-201ENST00000399959 WIPF2Q8TF74 440 aaPredicted RBP11.08□□□□□ -0.64
DDX3X-201ENST00000399959 IGLC1P0CG04 106 aa11.08□□□□□ -0.64
DDX3X-201ENST00000399959 ZNF747Q9BV97 191 aa11.08□□□□□ -0.64
DDX3X-201ENST00000399959 LRRK1Q38SD2 2015 aa11.07□□□□□ -0.64
DDX3X-201ENST00000399959 CARD19Q96LW7 228 aa11.07□□□□□ -0.64
DDX3X-201ENST00000399959 TRAV26-1A0A087WT03 109 aa11.07□□□□□ -0.64
DDX3X-201ENST00000399959 G3V4G9 280 aa11.07□□□□□ -0.64
DDX3X-201ENST00000399959 TAX1BP3O14907 124 aa11.07□□□□□ -0.64
DDX3X-201ENST00000399959 IGKV1-39P01597 117 aa11.07□□□□□ -0.64
DDX3X-201ENST00000399959 IGKV1D-39P04432 117 aa11.07□□□□□ -0.64
DDX3X-201ENST00000399959 TMEM141Q96I45 108 aa11.07□□□□□ -0.64
DDX3X-201ENST00000399959 JPT2Q9H910 190 aa11.07□□□□□ -0.64
DDX3X-201ENST00000399959 DKK2Q9UBU2 259 aa11.07□□□□□ -0.64
DDX3X-201ENST00000399959 TP53TG1Q9Y2A0 90 aa11.07□□□□□ -0.64
DDX3X-201ENST00000399959 E9PLN8 166 aa11.07□□□□□ -0.64
DDX3X-201ENST00000399959 FOXG1P55316 489 aaPredicted RBP11.07□□□□□ -0.64
DDX3X-201ENST00000399959 PAX8Q06710 450 aa11.07□□□□□ -0.64
DDX3X-201ENST00000399959 PDE6HQ13956 83 aa11.07□□□□□ -0.64
DDX3X-201ENST00000399959 SHANK2-AS3Q9BTD1 123 aa11.07□□□□□ -0.64
DDX3X-201ENST00000399959 COL5A3P25940 1745 aaPredicted RBP11.07□□□□□ -0.64
DDX3X-201ENST00000399959 SRD5A1P18405 259 aa11.07□□□□□ -0.64
DDX3X-201ENST00000399959 BSPH1Q075Z2 132 aa11.07□□□□□ -0.64
DDX3X-201ENST00000399959 PIMREGQ9BSJ6 248 aa11.07□□□□□ -0.64
DDX3X-201ENST00000399959 HLA-DRB4P13762 266 aa11.06□□□□□ -0.64
DDX3X-201ENST00000399959 CRYBA4P53673 196 aa11.06□□□□□ -0.64
DDX3X-201ENST00000399959 IGFL4Q6B9Z1 124 aa11.06□□□□□ -0.64
DDX3X-201ENST00000399959 CENPVQ7Z7K6 275 aaPredicted RBP11.06□□□□□ -0.64
DDX3X-201ENST00000399959 C8orf49Q96NF6 230 aa11.06□□□□□ -0.64
DDX3X-201ENST00000399959 HLA-DRB4X5D2U9 266 aa11.06□□□□□ -0.64
DDX3X-201ENST00000399959 NDUFS7O75251 213 aa11.06□□□□□ -0.64
DDX3X-201ENST00000399959 NPYP01303 97 aa11.06□□□□□ -0.64
DDX3X-201ENST00000399959 GREB1Q4ZG55 1949 aa11.06□□□□□ -0.64
DDX3X-201ENST00000399959 SPAARA0A1B0GVQ0 90 aa11.06□□□□□ -0.64
DDX3X-201ENST00000399959 LINC00477Q96M19 166 aa11.06□□□□□ -0.64
DDX3X-201ENST00000399959 PRIMA1Q86XR5 153 aa11.06□□□□□ -0.64
DDX3X-201ENST00000399959 SCRT2Q9NQ03 307 aa11.06□□□□□ -0.64
DDX3X-201ENST00000399959 IGLL5B9A064 214 aa11.05□□□□□ -0.64
DDX3X-201ENST00000399959 C9orf139Q6ZV77 190 aa11.05□□□□□ -0.64
DDX3X-201ENST00000399959 GGNQ86UU5 652 aa11.05□□□□□ -0.64
DDX3X-201ENST00000399959 PCP2Q8IVA1 136 aa11.05□□□□□ -0.64
DDX3X-201ENST00000399959 SVILO95425 2214 aa11.05□□□□□ -0.64
DDX3X-201ENST00000399959 IGHV1-18A0A0C4DH31 117 aa11.05□□□□□ -0.64
DDX3X-201ENST00000399959 IGHG4P01861 327 aa11.05□□□□□ -0.64
DDX3X-201ENST00000399959 FOXL2NBQ6ZUU3 175 aa11.05□□□□□ -0.64
DDX3X-201ENST00000399959 ZCCHC24Q8N2G6 241 aaKnown RBP11.05□□□□□ -0.64
DDX3X-201ENST00000399959 SHANK3Q9BYB0 1731 aa11.05□□□□□ -0.64
DDX3X-201ENST00000399959 F8VRH5 84 aa11.05□□□□□ -0.64
DDX3X-201ENST00000399959 C9orf106Q8NAJ2 232 aa11.05□□□□□ -0.64
DDX3X-201ENST00000399959 ESPL1Q14674 2120 aa11.05□□□□□ -0.64
DDX3X-201ENST00000399959 SRRM4A7MD48 611 aaKnown RBP11.05□□□□□ -0.64
DDX3X-201ENST00000399959 C8orf86Q6ZUL3 223 aa11.05□□□□□ -0.64
DDX3X-201ENST00000399959 SBF2Q86WG5 1849 aa11.05□□□□□ -0.64
DDX3X-201ENST00000399959 FOXI2Q6ZQN5 318 aa11.04□□□□□ -0.64
DDX3X-201ENST00000399959 HS3ST6Q96QI5 342 aa11.04□□□□□ -0.64
DDX3X-201ENST00000399959 TMEM14BQ9NUH8 114 aa11.04□□□□□ -0.64
DDX3X-201ENST00000399959 ICE1Q9Y2F5 2266 aa11.04□□□□□ -0.64
DDX3X-201ENST00000399959 ERCC8Q13216 396 aa11.04□□□□□ -0.64
DDX3X-201ENST00000399959 C15orf32Q32M92 178 aa11.04□□□□□ -0.64
DDX3X-201ENST00000399959 C1orf43Q9BWL3 253 aa11.04□□□□□ -0.64
DDX3X-201ENST00000399959 PLA2G2EQ9NZK7 142 aa11.04□□□□□ -0.64
DDX3X-201ENST00000399959 IGHV3-73A0A0B4J1V6 119 aa11.04□□□□□ -0.64
DDX3X-201ENST00000399959 IGHV1-46P01743 117 aa11.03□□□□□ -0.64
DDX3X-201ENST00000399959 COL4A5P29400 1685 aa11.03□□□□□ -0.64
DDX3X-201ENST00000399959 IGHV1-3A0A0C4DH29 117 aa11.03□□□□□ -0.64
DDX3X-201ENST00000399959 TMEM200BQ69YZ2 307 aa11.03□□□□□ -0.64
DDX3X-201ENST00000399959 ASPHD1Q5U4P2 390 aa11.03□□□□□ -0.64
DDX3X-201ENST00000399959 IL17RELQ6ZVW7 336 aa11.03□□□□□ -0.64
DDX3X-201ENST00000399959 RNF5Q99942 180 aa11.03□□□□□ -0.64
DDX3X-201ENST00000399959 ARHGEF17Q96PE2 2063 aaPredicted RBP11.03□□□□□ -0.64
DDX3X-201ENST00000399959 TRAV13-1A0A0B4J241 112 aa11.03□□□□□ -0.64
DDX3X-201ENST00000399959 CHCHD5Q9BSY4 110 aa11.03□□□□□ -0.64
DDX3X-201ENST00000399959 A0A087WWL8 130 aa11.02□□□□□ -0.64
DDX3X-201ENST00000399959 PRSS29PA6NIE9 313 aa11.02□□□□□ -0.64
DDX3X-201ENST00000399959 POU2AF1Q16633 256 aa11.02□□□□□ -0.64
DDX3X-201ENST00000399959 IGKV1-16P04430 117 aa11.02□□□□□ -0.65
DDX3X-201ENST00000399959 UBL5Q9BZL1 73 aa11.02□□□□□ -0.65
DDX3X-201ENST00000399959 PLXNA1Q9UIW2 1896 aa11.02□□□□□ -0.65
DDX3X-201ENST00000399959 A0A087WX48 190 aa11.02□□□□□ -0.65
DDX3X-201ENST00000399959 J3KT08 172 aa11.02□□□□□ -0.65
DDX3X-201ENST00000399959 IGHV1-8P0DP01 117 aa11.02□□□□□ -0.65
DDX3X-201ENST00000399959 KLRD1Q13241 179 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms