RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 BAP18Q8IXM2 172 aa13.02□□□□□ -0.33
FXN-203ENST00000396366 C12orf45Q8N5I9 185 aaPredicted RBP13.02□□□□□ -0.33
FXN-203ENST00000396366 TMEM37Q8WXS4 190 aa13.02□□□□□ -0.33
FXN-203ENST00000396366 NIPSNAP3BQ9BS92 247 aa13.02□□□□□ -0.33
FXN-203ENST00000396366 NDUFAF3Q9BU61 184 aa13.02□□□□□ -0.33
FXN-203ENST00000396366 GGACTQ9BVM4 153 aa13.02□□□□□ -0.33
FXN-203ENST00000396366 C11orf1Q9H5F2 150 aa13.02□□□□□ -0.33
FXN-203ENST00000396366 DNAH17Q9UFH2 4485 aa13.02□□□□□ -0.33
FXN-203ENST00000396366 H3BTX0 84 aa13.01□□□□□ -0.33
FXN-203ENST00000396366 HTN3P15516 51 aa13.01□□□□□ -0.33
FXN-203ENST00000396366 HIST1H1AQ02539 215 aaPredicted RBP13.01□□□□□ -0.33
FXN-203ENST00000396366 PSG3Q16557 428 aa13.01□□□□□ -0.33
FXN-203ENST00000396366 ZNF546Q86UE3 836 aa13.01□□□□□ -0.33
FXN-203ENST00000396366 LRRC20Q8TCA0 184 aa13.01□□□□□ -0.33
FXN-203ENST00000396366 CAV2P51636 162 aa13□□□□□ -0.33
FXN-203ENST00000396366 OR8A1Q8NGG7 326 aa13□□□□□ -0.33
FXN-203ENST00000396366 C2orf50Q96LR7 162 aa13□□□□□ -0.33
FXN-203ENST00000396366 CCDC32Q9BV29 185 aa13□□□□□ -0.33
FXN-203ENST00000396366 FAT2Q9NYQ8 4349 aa12.99□□□□□ -0.33
FXN-203ENST00000396366 COX7A2P2O60397 106 aa12.99□□□□□ -0.33
FXN-203ENST00000396366 INSP01308 110 aa12.99□□□□□ -0.33
FXN-203ENST00000396366 AZU1P20160 251 aa12.99□□□□□ -0.33
FXN-203ENST00000396366 RHOBP62745 196 aa12.99□□□□□ -0.33
FXN-203ENST00000396366 PXDC1Q5TGL8 231 aa12.99□□□□□ -0.33
FXN-203ENST00000396366 TRAV5A0A0B4J249 113 aa12.98□□□□□ -0.33
FXN-203ENST00000396366 FAM240BA0A1B0GVZ2 78 aa12.98□□□□□ -0.33
FXN-203ENST00000396366 BOLA2-SMG1P6H3BVE0 249 aa12.98□□□□□ -0.33
FXN-203ENST00000396366 CAMLGP49069 296 aa12.98□□□□□ -0.33
FXN-203ENST00000396366 IL15RAQ13261 267 aa12.98□□□□□ -0.33
FXN-203ENST00000396366 OPCMLQ14982 345 aa12.98□□□□□ -0.33
FXN-203ENST00000396366 MIC13Q5XKP0 118 aa12.98□□□□□ -0.33
FXN-203ENST00000396366 NRARPQ7Z6K4 114 aa12.98□□□□□ -0.33
FXN-203ENST00000396366 POM121L12Q8N7R1 296 aa12.98□□□□□ -0.33
FXN-203ENST00000396366 RPUSD4Q96CM3 377 aaKnown RBP12.98□□□□□ -0.33
FXN-203ENST00000396366 IGSF23A1L1A6 192 aa12.97□□□□□ -0.33
FXN-203ENST00000396366 PRAC2D3DTV9 90 aa12.97□□□□□ -0.33
FXN-203ENST00000396366 SLC17A3O00476 420 aa12.97□□□□□ -0.33
FXN-203ENST00000396366 S100A10P60903 97 aa12.97□□□□□ -0.33
FXN-203ENST00000396366 RAB32Q13637 225 aa12.97□□□□□ -0.33
FXN-203ENST00000396366 FCN2Q15485 313 aa12.97□□□□□ -0.33
FXN-203ENST00000396366 C10orf113Q5VZT2 155 aa12.97□□□□□ -0.33
FXN-203ENST00000396366 S100A7AQ86SG5 101 aa12.97□□□□□ -0.33
FXN-203ENST00000396366 ZNF331Q9NQX6 463 aaPredicted RBP12.97□□□□□ -0.33
FXN-203ENST00000396366 TEX48A0A1B0GUV7 120 aa12.96□□□□□ -0.33
FXN-203ENST00000396366 H3BQ15 152 aa12.96□□□□□ -0.33
FXN-203ENST00000396366 M0R2N4 97 aa12.96□□□□□ -0.33
FXN-203ENST00000396366 P0DMU3 169 aa12.96□□□□□ -0.33
FXN-203ENST00000396366 FAM231AP0DMU4 169 aa12.96□□□□□ -0.33
FXN-203ENST00000396366 FAM231CP0DMU5 169 aa12.96□□□□□ -0.33
FXN-203ENST00000396366 DAD1P61803 113 aa12.96□□□□□ -0.33
FXN-203ENST00000396366 KIR3DS1Q14943 382 aa12.96□□□□□ -0.33
FXN-203ENST00000396366 OXA1LQ15070 435 aa12.96□□□□□ -0.33
FXN-203ENST00000396366 BPIFA4PQ86YQ2 179 aa12.96□□□□□ -0.33
FXN-203ENST00000396366 LINC01587Q99440 93 aa12.96□□□□□ -0.33
FXN-203ENST00000396366 PARD6GQ9BYG4 376 aaPredicted RBP12.96□□□□□ -0.33
FXN-203ENST00000396366 DNAJC4Q9NNZ3 241 aa12.96□□□□□ -0.33
FXN-203ENST00000396366 PPP1R14DQ9NXH3 145 aa12.96□□□□□ -0.33
FXN-203ENST00000396366 WDR83OSQ9Y284 106 aa12.96□□□□□ -0.33
FXN-203ENST00000396366 PLAC8L1A1L4L8 177 aa12.95□□□□□ -0.34
FXN-203ENST00000396366 LCN15Q6UWW0 184 aa12.95□□□□□ -0.34
FXN-203ENST00000396366 TMEM252Q8N6L7 170 aa12.95□□□□□ -0.34
FXN-203ENST00000396366 LYRM2Q9NU23 88 aaPredicted RBP12.95□□□□□ -0.34
FXN-203ENST00000396366 UQCC1Q9NVA1 299 aa12.95□□□□□ -0.34
FXN-203ENST00000396366 UBE2L5PA0A1B0GUS4 154 aa12.94□□□□□ -0.34
FXN-203ENST00000396366 IGLC2P0DOY2 106 aa12.94□□□□□ -0.34
FXN-203ENST00000396366 HTN1P15515 57 aa12.94□□□□□ -0.34
FXN-203ENST00000396366 PVALBP20472 110 aaPredicted RBP12.94□□□□□ -0.34
FXN-203ENST00000396366 SULT1A1P50225 295 aa12.94□□□□□ -0.34
FXN-203ENST00000396366 ASAH1Q13510 395 aa12.94□□□□□ -0.34
FXN-203ENST00000396366 RAB31Q13636 194 aa12.94□□□□□ -0.34
FXN-203ENST00000396366 VWC2Q2TAL6 325 aa12.94□□□□□ -0.34
FXN-203ENST00000396366 MZT2BQ6NZ67 158 aa12.94□□□□□ -0.34
FXN-203ENST00000396366 TMEM88Q6PEY1 159 aa12.94□□□□□ -0.34
FXN-203ENST00000396366 SIX6O95475 246 aa12.93□□□□□ -0.34
FXN-203ENST00000396366 DEFB130BP0DP73 79 aa12.93□□□□□ -0.34
FXN-203ENST00000396366 DEFB130AP0DP74 79 aa12.93□□□□□ -0.34
FXN-203ENST00000396366 CXCL2P19875 107 aa12.93□□□□□ -0.34
FXN-203ENST00000396366 Q6ZRG5 221 aa12.93□□□□□ -0.34
FXN-203ENST00000396366 SAT2Q96F10 170 aaPredicted RBP12.93□□□□□ -0.34
FXN-203ENST00000396366 FAM210BQ96KR6 192 aa12.93□□□□□ -0.34
FXN-203ENST00000396366 SLC50A1Q9BRV3 221 aa12.93□□□□□ -0.34
FXN-203ENST00000396366 RNF24Q9Y225 148 aa12.93□□□□□ -0.34
FXN-203ENST00000396366 HERC2O95714 4834 aa12.92□□□□□ -0.34
FXN-203ENST00000396366 S100A11P31949 105 aa12.92□□□□□ -0.34
FXN-203ENST00000396366 IFITM3Q01628 133 aa12.92□□□□□ -0.34
FXN-203ENST00000396366 BAXQ07812 192 aa12.92□□□□□ -0.34
FXN-203ENST00000396366 LINC00299Q6ZSB3 139 aa12.92□□□□□ -0.34
FXN-203ENST00000396366 SLC39A9Q9NUM3 307 aa12.92□□□□□ -0.34
FXN-203ENST00000396366 IGLV2-18A0A075B6J9 118 aa12.91□□□□□ -0.34
FXN-203ENST00000396366 LYRM9A8MSI8 78 aa12.91□□□□□ -0.34
FXN-203ENST00000396366 TSPOP30536 169 aa12.91□□□□□ -0.34
FXN-203ENST00000396366 CDKN1BP46527 198 aa12.91□□□□□ -0.34
FXN-203ENST00000396366 RPL29P47914 159 aaKnown RBP12.91□□□□□ -0.34
FXN-203ENST00000396366 B2MP61769 119 aa12.91□□□□□ -0.34
FXN-203ENST00000396366 UBE2DNLQ8IWF7 75 aa12.91□□□□□ -0.34
FXN-203ENST00000396366 S100ZQ8WXG8 99 aa12.91□□□□□ -0.34
FXN-203ENST00000396366 ZNF586Q9NXT0 402 aa12.91□□□□□ -0.34
FXN-203ENST00000396366 PKD1P98161 4303 aa12.9□□□□□ -0.34
FXN-203ENST00000396366 FGF7P21781 194 aa12.9□□□□□ -0.34
FXN-203ENST00000396366 TAS2R60P59551 318 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms