RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 SLC25A47Q6Q0C1 308 aa6.89□□□□□ -1.31
NDE1-202ENST00000396355 PCSK4Q6UW60 755 aa6.89□□□□□ -1.31
NDE1-202ENST00000396355 IGLL5B9A064 214 aa6.89□□□□□ -1.31
NDE1-202ENST00000396355 NABP1Q96AH0 204 aa6.89□□□□□ -1.31
NDE1-202ENST00000396355 CHCHD1Q96BP2 118 aaKnown RBP6.89□□□□□ -1.31
NDE1-202ENST00000396355 OXGR1Q96P68 337 aa6.89□□□□□ -1.31
NDE1-202ENST00000396355 IGLV3-32A0A0A0MS00 114 aa6.89□□□□□ -1.31
NDE1-202ENST00000396355 C2orf70A6NJV1 201 aa6.89□□□□□ -1.31
NDE1-202ENST00000396355 DLX1P56177 255 aa6.89□□□□□ -1.31
NDE1-202ENST00000396355 KLRD1Q13241 179 aa6.89□□□□□ -1.31
NDE1-202ENST00000396355 IL11RAQ14626 422 aa6.89□□□□□ -1.31
NDE1-202ENST00000396355 RSPO1Q2MKA7 263 aaPredicted RBP6.89□□□□□ -1.31
NDE1-202ENST00000396355 Q8N976 141 aa6.89□□□□□ -1.31
NDE1-202ENST00000396355 VPREB3Q9UKI3 123 aa6.89□□□□□ -1.31
NDE1-202ENST00000396355 ITPR3Q14573 2671 aa6.89□□□□□ -1.31
NDE1-202ENST00000396355 FOXI3A8MTJ6 420 aaPredicted RBP6.88□□□□□ -1.31
NDE1-202ENST00000396355 NPIPB6E9PJ23 425 aa6.88□□□□□ -1.31
NDE1-202ENST00000396355 SMKR1H3BMG3 65 aa6.88□□□□□ -1.31
NDE1-202ENST00000396355 ORM1P02763 201 aa6.88□□□□□ -1.31
NDE1-202ENST00000396355 CCL1P22362 96 aa6.88□□□□□ -1.31
NDE1-202ENST00000396355 GNLYP22749 145 aa6.88□□□□□ -1.31
NDE1-202ENST00000396355 EFNB3Q15768 340 aa6.88□□□□□ -1.31
NDE1-202ENST00000396355 CIARTQ8N365 385 aaPredicted RBP6.88□□□□□ -1.31
NDE1-202ENST00000396355 DRAM1Q8N682 238 aa6.88□□□□□ -1.31
NDE1-202ENST00000396355 RASL11BQ9BPW5 248 aa6.88□□□□□ -1.31
NDE1-202ENST00000396355 TM2D1Q9BX74 207 aa6.88□□□□□ -1.31
NDE1-202ENST00000396355 OR2H1Q9GZK4 316 aa6.88□□□□□ -1.31
NDE1-202ENST00000396355 DKK2Q9UBU2 259 aa6.88□□□□□ -1.31
NDE1-202ENST00000396355 CHCHD2Q9Y6H1 151 aaPredicted RBP6.88□□□□□ -1.31
NDE1-202ENST00000396355 IGHV5-10-1A0A0J9YXX1 117 aa6.88□□□□□ -1.31
NDE1-202ENST00000396355 C12orf74Q32Q52 190 aa6.88□□□□□ -1.31
NDE1-202ENST00000396355 TAAR6Q96RI8 345 aa6.88□□□□□ -1.31
NDE1-202ENST00000396355 DEFB127Q9H1M4 99 aa6.88□□□□□ -1.31
NDE1-202ENST00000396355 LTAP01374 205 aa6.88□□□□□ -1.31
NDE1-202ENST00000396355 IGKV1-5P01602 117 aa6.88□□□□□ -1.31
NDE1-202ENST00000396355 IGLV3-1P01715 115 aa6.88□□□□□ -1.31
NDE1-202ENST00000396355 CCL3P10147 92 aa6.88□□□□□ -1.31
NDE1-202ENST00000396355 NTN5Q8WTR8 489 aaPredicted RBP6.88□□□□□ -1.31
NDE1-202ENST00000396355 ZNF837Q96EG3 531 aaPredicted RBP6.88□□□□□ -1.31
NDE1-202ENST00000396355 NXT2Q9NPJ8 142 aaKnown RBP6.88□□□□□ -1.31
NDE1-202ENST00000396355 CRYGCP07315 174 aa6.87□□□□□ -1.31
NDE1-202ENST00000396355 LEPP41159 167 aa6.87□□□□□ -1.31
NDE1-202ENST00000396355 ZNF415Q09FC8 603 aa6.87□□□□□ -1.31
NDE1-202ENST00000396355 TNRC6BQ9UPQ9 1833 aaKnown RBP6.87□□□□□ -1.31
NDE1-202ENST00000396355 A0A1B0GUT8 65 aa6.87□□□□□ -1.31
NDE1-202ENST00000396355 C17orf98A8MV24 154 aa6.87□□□□□ -1.31
NDE1-202ENST00000396355 C8orf88P0DMB2 117 aa6.87□□□□□ -1.31
NDE1-202ENST00000396355 LINC00694P0DN24 101 aa6.87□□□□□ -1.31
NDE1-202ENST00000396355 DUX5Q96PT3 197 aa6.87□□□□□ -1.31
NDE1-202ENST00000396355 TNFRSF18Q9Y5U5 241 aa6.87□□□□□ -1.31
NDE1-202ENST00000396355 TANC2Q9HCD6 1990 aa6.87□□□□□ -1.31
NDE1-202ENST00000396355 HBDP02042 147 aa6.87□□□□□ -1.31
NDE1-202ENST00000396355 C10orf113Q5VZT2 155 aa6.87□□□□□ -1.31
NDE1-202ENST00000396355 GOLT1AQ6ZVE7 132 aa6.87□□□□□ -1.31
NDE1-202ENST00000396355 PROK2Q9HC23 129 aa6.87□□□□□ -1.31
NDE1-202ENST00000396355 HIGD1AQ9Y241 93 aa6.87□□□□□ -1.31
NDE1-202ENST00000396355 ITPR1Q14643 2758 aa6.87□□□□□ -1.31
NDE1-202ENST00000396355 BOD1L1Q8NFC6 3051 aa6.87□□□□□ -1.31
NDE1-202ENST00000396355 SMIM9A6NGZ8 99 aa6.86□□□□□ -1.31
NDE1-202ENST00000396355 COL8A2P25067 703 aa6.86□□□□□ -1.31
NDE1-202ENST00000396355 SPINK14Q6IE38 97 aa6.86□□□□□ -1.31
NDE1-202ENST00000396355 HRCT1Q6UXD1 115 aa6.86□□□□□ -1.31
NDE1-202ENST00000396355 RPP21Q9H633 154 aaKnown RBP6.86□□□□□ -1.31
NDE1-202ENST00000396355 PEX7O00628 323 aa6.86□□□□□ -1.31
NDE1-202ENST00000396355 ADIPOQQ15848 244 aa6.86□□□□□ -1.31
NDE1-202ENST00000396355 UFSP1Q6NVU6 142 aa6.86□□□□□ -1.31
NDE1-202ENST00000396355 MRPL14Q6P1L8 145 aaKnown RBP6.86□□□□□ -1.31
NDE1-202ENST00000396355 ZNF474Q6S9Z5 364 aaPredicted RBP6.86□□□□□ -1.31
NDE1-202ENST00000396355 RBPMS2Q6ZRY4 209 aaKnown RBP6.86□□□□□ -1.31
NDE1-202ENST00000396355 FGFBP3Q8TAT2 258 aa6.86□□□□□ -1.31
NDE1-202ENST00000396355 DDB2Q92466 427 aa6.86□□□□□ -1.31
NDE1-202ENST00000396355 YLPM1P49750 1951 aaKnown RBP6.86□□□□□ -1.31
NDE1-202ENST00000396355 TRAV40A0A0B4J280 105 aa6.86□□□□□ -1.31
NDE1-202ENST00000396355 D6R8Y8 96 aa6.86□□□□□ -1.31
NDE1-202ENST00000396355 NTN3O00634 580 aaPredicted RBP6.86□□□□□ -1.31
NDE1-202ENST00000396355 IGKCP01834 107 aa6.86□□□□□ -1.31
NDE1-202ENST00000396355 FAM236AA0A1B0GUQ0 79 aa6.85□□□□□ -1.31
NDE1-202ENST00000396355 FAM236BA0A1B0GV22 79 aa6.85□□□□□ -1.31
NDE1-202ENST00000396355 J3KT08 172 aa6.85□□□□□ -1.31
NDE1-202ENST00000396355 PCOLCEQ15113 449 aa6.85□□□□□ -1.31
NDE1-202ENST00000396355 MDP1Q86V88 176 aa6.85□□□□□ -1.31
NDE1-202ENST00000396355 OR10J6PQ8NGY7 276 aa6.85□□□□□ -1.31
NDE1-202ENST00000396355 TCRBV4S1A1TA0A5B7 111 aa6.85□□□□□ -1.31
NDE1-202ENST00000396355 ZNF815PA8K554 130 aa6.85□□□□□ -1.31
NDE1-202ENST00000396355 ATP5IP56385 69 aaPredicted RBP6.85□□□□□ -1.31
NDE1-202ENST00000396355 PCBD1P61457 104 aa6.85□□□□□ -1.31
NDE1-202ENST00000396355 LYZP61626 148 aa6.85□□□□□ -1.31
NDE1-202ENST00000396355 PLGLAQ15195 96 aa6.85□□□□□ -1.31
NDE1-202ENST00000396355 Q6AWC8 147 aa6.85□□□□□ -1.31
NDE1-202ENST00000396355 DEFB108BQ8NET1 73 aa6.85□□□□□ -1.31
NDE1-202ENST00000396355 NUP37Q8NFH4 326 aa6.85□□□□□ -1.31
NDE1-202ENST00000396355 SPATA25Q9BR10 227 aa6.85□□□□□ -1.31
NDE1-202ENST00000396355 SMG1Q96Q15 3661 aaKnown RBP6.85□□□□□ -1.31
NDE1-202ENST00000396355 TRAV4A0A0B4J268 109 aa6.85□□□□□ -1.31
NDE1-202ENST00000396355 IGKV1-12A0A0C4DH73 117 aa6.85□□□□□ -1.31
NDE1-202ENST00000396355 A0A1W2PNU3 283 aaPredicted RBP6.85□□□□□ -1.31
NDE1-202ENST00000396355 IGKV1D-12P01611 117 aa6.85□□□□□ -1.31
NDE1-202ENST00000396355 REG1AP05451 166 aa6.85□□□□□ -1.31
NDE1-202ENST00000396355 WT1P19544 449 aaPredicted RBP6.85□□□□□ -1.31
NDE1-202ENST00000396355 TREML4Q6UXN2 200 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms