RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 PRR20EP86478 221 aa12.65□□□□□ -0.38
UPK3A-202ENST00000396082 PRR20CP86479 221 aa12.65□□□□□ -0.38
UPK3A-202ENST00000396082 PRR20DP86480 221 aa12.65□□□□□ -0.38
UPK3A-202ENST00000396082 PRR20BP86481 221 aa12.65□□□□□ -0.38
UPK3A-202ENST00000396082 PRR20AP86496 221 aa12.65□□□□□ -0.38
UPK3A-202ENST00000396082 NHLH2Q02577 135 aa12.65□□□□□ -0.38
UPK3A-202ENST00000396082 PPP1R1CQ8WVI7 109 aa12.65□□□□□ -0.38
UPK3A-202ENST00000396082 SLC50A1Q9BRV3 221 aa12.65□□□□□ -0.38
UPK3A-202ENST00000396082 HRH4Q9H3N8 390 aa12.65□□□□□ -0.38
UPK3A-202ENST00000396082 PXMP4Q9Y6I8 212 aa12.65□□□□□ -0.38
UPK3A-202ENST00000396082 MRPS12O15235 138 aaKnown RBP12.64□□□□□ -0.39
UPK3A-202ENST00000396082 MPDU1O75352 247 aa12.64□□□□□ -0.39
UPK3A-202ENST00000396082 SNRPCP09234 159 aaKnown RBP12.64□□□□□ -0.39
UPK3A-202ENST00000396082 ZNF705DP0CH99 300 aaPredicted RBP12.64□□□□□ -0.39
UPK3A-202ENST00000396082 ZNF705BP0CI00 300 aaPredicted RBP12.64□□□□□ -0.39
UPK3A-202ENST00000396082 PET100P0DJ07 73 aa12.64□□□□□ -0.39
UPK3A-202ENST00000396082 CXCL2P19875 107 aa12.64□□□□□ -0.39
UPK3A-202ENST00000396082 CXCL3P19876 107 aa12.64□□□□□ -0.39
UPK3A-202ENST00000396082 HLA-DMBP28068 263 aa12.64□□□□□ -0.39
UPK3A-202ENST00000396082 HIST1H1AQ02539 215 aaPredicted RBP12.64□□□□□ -0.39
UPK3A-202ENST00000396082 CLINT1Q14677 625 aa12.64□□□□□ -0.39
UPK3A-202ENST00000396082 MORN5Q5VZ52 161 aa12.64□□□□□ -0.39
UPK3A-202ENST00000396082 ZNF705AQ6ZN79 300 aaPredicted RBP12.64□□□□□ -0.39
UPK3A-202ENST00000396082 H0YIZ8 118 aa12.63□□□□□ -0.39
UPK3A-202ENST00000396082 LY6G6CO95867 125 aa12.63□□□□□ -0.39
UPK3A-202ENST00000396082 PSG3Q16557 428 aa12.63□□□□□ -0.39
UPK3A-202ENST00000396082 THAP6Q8TBB0 222 aa12.63□□□□□ -0.39
UPK3A-202ENST00000396082 LINC00476Q8WZB0 136 aa12.63□□□□□ -0.39
UPK3A-202ENST00000396082 TMEM208Q9BTX3 173 aa12.63□□□□□ -0.39
UPK3A-202ENST00000396082 NPCDR1Q9BY65 106 aa12.63□□□□□ -0.39
UPK3A-202ENST00000396082 PPP1R14DQ9NXH3 145 aa12.63□□□□□ -0.39
UPK3A-202ENST00000396082 SACSQ9NZJ4 4579 aa12.62□□□□□ -0.39
UPK3A-202ENST00000396082 SMIM9A6NGZ8 99 aa12.62□□□□□ -0.39
UPK3A-202ENST00000396082 ZNF705FA8MVS1 300 aaPredicted RBP12.62□□□□□ -0.39
UPK3A-202ENST00000396082 C11orf94C9JXX5 98 aa12.62□□□□□ -0.39
UPK3A-202ENST00000396082 H3BTX0 84 aa12.62□□□□□ -0.39
UPK3A-202ENST00000396082 AMBPP02760 352 aa12.62□□□□□ -0.39
UPK3A-202ENST00000396082 EMP1P54849 157 aa12.62□□□□□ -0.39
UPK3A-202ENST00000396082 RHOBP62745 196 aa12.62□□□□□ -0.39
UPK3A-202ENST00000396082 SPINK13Q1W4C9 94 aa12.62□□□□□ -0.39
UPK3A-202ENST00000396082 OR11H7Q8NGC8 314 aa12.62□□□□□ -0.39
UPK3A-202ENST00000396082 C2CD4CQ8TF44 421 aa12.62□□□□□ -0.39
UPK3A-202ENST00000396082 NEU1Q99519 415 aa12.62□□□□□ -0.39
UPK3A-202ENST00000396082 RFNGQ9Y644 331 aa12.62□□□□□ -0.39
UPK3A-202ENST00000396082 TRAV5A0A0B4J249 113 aa12.61□□□□□ -0.39
UPK3A-202ENST00000396082 TMEM189A5PLL7 270 aa12.61□□□□□ -0.39
UPK3A-202ENST00000396082 A8MTW9 85 aa12.61□□□□□ -0.39
UPK3A-202ENST00000396082 MPC2O95563 127 aa12.61□□□□□ -0.39
UPK3A-202ENST00000396082 PTTG1O95997 202 aa12.61□□□□□ -0.39
UPK3A-202ENST00000396082 HBE1P02100 147 aa12.61□□□□□ -0.39
UPK3A-202ENST00000396082 AMTNQ6UX39 209 aa12.61□□□□□ -0.39
UPK3A-202ENST00000396082 OR8A1Q8NGG7 326 aa12.61□□□□□ -0.39
UPK3A-202ENST00000396082 CHAC2Q8WUX2 184 aa12.61□□□□□ -0.39
UPK3A-202ENST00000396082 RPUSD4Q96CM3 377 aaKnown RBP12.61□□□□□ -0.39
UPK3A-202ENST00000396082 IGF2BP2-AS1Q96M15 143 aa12.61□□□□□ -0.39
UPK3A-202ENST00000396082 ZNF331Q9NQX6 463 aaPredicted RBP12.61□□□□□ -0.39
UPK3A-202ENST00000396082 KCNIP2Q9NS61 270 aa12.61□□□□□ -0.39
UPK3A-202ENST00000396082 CELA1Q9UNI1 258 aa12.61□□□□□ -0.39
UPK3A-202ENST00000396082 RYR2Q92736 4967 aa12.6□□□□□ -0.39
UPK3A-202ENST00000396082 M0R2Z0 102 aa12.6□□□□□ -0.39
UPK3A-202ENST00000396082 INSP01308 110 aa12.6□□□□□ -0.39
UPK3A-202ENST00000396082 IGLC2P0DOY2 106 aa12.6□□□□□ -0.39
UPK3A-202ENST00000396082 PRB4P10163 310 aaPredicted RBP12.6□□□□□ -0.39
UPK3A-202ENST00000396082 Q6ZTC4 211 aa12.6□□□□□ -0.39
UPK3A-202ENST00000396082 ALG5Q9Y673 324 aa12.6□□□□□ -0.39
UPK3A-202ENST00000396082 TRAV10A0A0B4J240 114 aa12.59□□□□□ -0.39
UPK3A-202ENST00000396082 BOLA2-SMG1P6H3BVE0 249 aa12.59□□□□□ -0.39
UPK3A-202ENST00000396082 SLC17A3O00476 420 aa12.59□□□□□ -0.39
UPK3A-202ENST00000396082 GUK1Q16774 197 aa12.59□□□□□ -0.39
UPK3A-202ENST00000396082 RRN3P1Q2M238 152 aa12.59□□□□□ -0.39
UPK3A-202ENST00000396082 ZNF767PQ75MW2 155 aa12.59□□□□□ -0.39
UPK3A-202ENST00000396082 C1orf158Q8N1D5 194 aa12.59□□□□□ -0.39
UPK3A-202ENST00000396082 MBD2Q9UBB5 411 aa12.59□□□□□ -0.39
UPK3A-202ENST00000396082 IGLL5B9A064 214 aa12.58□□□□□ -0.4
UPK3A-202ENST00000396082 C17orf112F2Z3M2 114 aa12.58□□□□□ -0.4
UPK3A-202ENST00000396082 H3BQ15 152 aa12.58□□□□□ -0.4
UPK3A-202ENST00000396082 SPART-AS1P0CW21 52 aa12.58□□□□□ -0.4
UPK3A-202ENST00000396082 BAP18Q8IXM2 172 aa12.58□□□□□ -0.4
UPK3A-202ENST00000396082 ATP5SQ99766 215 aa12.58□□□□□ -0.4
UPK3A-202ENST00000396082 RNF126Q9BV68 326 aa12.58□□□□□ -0.4
UPK3A-202ENST00000396082 WDR61Q9GZS3 305 aaKnown RBP12.58□□□□□ -0.4
UPK3A-202ENST00000396082 HSPB11Q9Y547 144 aa12.58□□□□□ -0.4
UPK3A-202ENST00000396082 ALMS1Q8TCU4 4167 aa12.57□□□□□ -0.4
UPK3A-202ENST00000396082 TRAV12-2A0A075B6T6 113 aa12.57□□□□□ -0.4
UPK3A-202ENST00000396082 LOC102723971A0A1B0GUV8 181 aa12.57□□□□□ -0.4
UPK3A-202ENST00000396082 RPL12P30050 165 aaKnown RBP12.57□□□□□ -0.4
UPK3A-202ENST00000396082 GCSAMLQ5JQS6 135 aa12.57□□□□□ -0.4
UPK3A-202ENST00000396082 OR10J6PQ8NGY7 276 aa12.57□□□□□ -0.4
UPK3A-202ENST00000396082 SMIM3Q9BZL3 60 aa12.57□□□□□ -0.4
UPK3A-202ENST00000396082 IFNA5P01569 189 aa12.56□□□□□ -0.4
UPK3A-202ENST00000396082 C12orf74Q32Q52 190 aa12.56□□□□□ -0.4
UPK3A-202ENST00000396082 SCGB1C1Q8TD33 95 aa12.56□□□□□ -0.4
UPK3A-202ENST00000396082 SAT2Q96F10 170 aaPredicted RBP12.56□□□□□ -0.4
UPK3A-202ENST00000396082 ZNF586Q9NXT0 402 aa12.56□□□□□ -0.4
UPK3A-202ENST00000396082 LYSTQ99698 3801 aa12.55□□□□□ -0.4
UPK3A-202ENST00000396082 TEX48A0A1B0GUV7 120 aa12.55□□□□□ -0.4
UPK3A-202ENST00000396082 CRXO43186 299 aaPredicted RBP12.55□□□□□ -0.4
UPK3A-202ENST00000396082 TCTAP57738 103 aa12.55□□□□□ -0.4
UPK3A-202ENST00000396082 BLNKQ8WV28 456 aa12.55□□□□□ -0.4
UPK3A-202ENST00000396082 MED28Q9H204 178 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms