RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 TRAV8-2A0A0B4J237 113 aa9.88□□□□□ -0.83
CXCL12-205ENST00000395794 CAMLGP49069 296 aa9.88□□□□□ -0.83
CXCL12-205ENST00000395794 HBG1P69891 147 aa9.88□□□□□ -0.83
CXCL12-205ENST00000395794 HBG2P69892 147 aa9.88□□□□□ -0.83
CXCL12-205ENST00000395794 RRN3P1Q2M238 152 aa9.88□□□□□ -0.83
CXCL12-205ENST00000395794 C10orf113Q5VZT2 155 aa9.88□□□□□ -0.83
CXCL12-205ENST00000395794 PATE2Q6UY27 113 aa9.88□□□□□ -0.83
CXCL12-205ENST00000395794 ZNF767PQ75MW2 155 aa9.88□□□□□ -0.83
CXCL12-205ENST00000395794 BPIFA4PQ86YQ2 179 aa9.88□□□□□ -0.83
CXCL12-205ENST00000395794 IGF2BP2-AS1Q96M15 143 aa9.88□□□□□ -0.83
CXCL12-205ENST00000395794 C17orf77Q96MU5 243 aa9.88□□□□□ -0.83
CXCL12-205ENST00000395794 MGST2Q99735 147 aa9.88□□□□□ -0.83
CXCL12-205ENST00000395794 RNF126Q9BV68 326 aa9.88□□□□□ -0.83
CXCL12-205ENST00000395794 UQCC1Q9NVA1 299 aa9.88□□□□□ -0.83
CXCL12-205ENST00000395794 APLNQ9ULZ1 77 aa9.88□□□□□ -0.83
CXCL12-205ENST00000395794 FAM24AA6NFZ4 105 aa9.87□□□□□ -0.83
CXCL12-205ENST00000395794 INSP01308 110 aa9.87□□□□□ -0.83
CXCL12-205ENST00000395794 S100A11P31949 105 aa9.87□□□□□ -0.83
CXCL12-205ENST00000395794 SULT1A1P50225 295 aa9.87□□□□□ -0.83
CXCL12-205ENST00000395794 RHOBP62745 196 aa9.87□□□□□ -0.83
CXCL12-205ENST00000395794 NRARPQ7Z6K4 114 aa9.87□□□□□ -0.83
CXCL12-205ENST00000395794 RPP25LQ8N5L8 163 aaKnown RBP9.87□□□□□ -0.83
CXCL12-205ENST00000395794 LYRM2Q9NU23 88 aaPredicted RBP9.87□□□□□ -0.83
CXCL12-205ENST00000395794 LOC102723971A0A1B0GUV8 181 aa9.86□□□□□ -0.83
CXCL12-205ENST00000395794 A8MTW9 85 aa9.86□□□□□ -0.83
CXCL12-205ENST00000395794 UPK1BO75841 260 aa9.86□□□□□ -0.83
CXCL12-205ENST00000395794 RLN2P04090 185 aa9.86□□□□□ -0.83
CXCL12-205ENST00000395794 CXCL2P19875 107 aa9.86□□□□□ -0.83
CXCL12-205ENST00000395794 CXCL3P19876 107 aa9.86□□□□□ -0.83
CXCL12-205ENST00000395794 B2MP61769 119 aa9.86□□□□□ -0.83
CXCL12-205ENST00000395794 HIST1H1AQ02539 215 aaPredicted RBP9.86□□□□□ -0.83
CXCL12-205ENST00000395794 PSG3Q16557 428 aa9.86□□□□□ -0.83
CXCL12-205ENST00000395794 SPINK13Q1W4C9 94 aa9.86□□□□□ -0.83
CXCL12-205ENST00000395794 LCN15Q6UWW0 184 aa9.86□□□□□ -0.83
CXCL12-205ENST00000395794 AMTNQ6UX39 209 aa9.86□□□□□ -0.83
CXCL12-205ENST00000395794 C1orf158Q8N1D5 194 aa9.86□□□□□ -0.83
CXCL12-205ENST00000395794 OR11H7Q8NGC8 314 aa9.86□□□□□ -0.83
CXCL12-205ENST00000395794 OR8A1Q8NGG7 326 aa9.86□□□□□ -0.83
CXCL12-205ENST00000395794 OR1L4Q8NGR5 311 aa9.86□□□□□ -0.83
CXCL12-205ENST00000395794 SLC50A1Q9BRV3 221 aa9.86□□□□□ -0.83
CXCL12-205ENST00000395794 NDUFAF3Q9BU61 184 aa9.86□□□□□ -0.83
CXCL12-205ENST00000395794 DNAJC4Q9NNZ3 241 aa9.86□□□□□ -0.83
CXCL12-205ENST00000395794 UBE2L5PA0A1B0GUS4 154 aa9.85□□□□□ -0.83
CXCL12-205ENST00000395794 BAXQ07812 192 aa9.85□□□□□ -0.83
CXCL12-205ENST00000395794 RAB32Q13637 225 aa9.85□□□□□ -0.83
CXCL12-205ENST00000395794 ATP6V1FQ16864 119 aa9.85□□□□□ -0.83
CXCL12-205ENST00000395794 FAM222AQ5U5X8 452 aa9.85□□□□□ -0.83
CXCL12-205ENST00000395794 TMEM252Q8N6L7 170 aa9.85□□□□□ -0.83
CXCL12-205ENST00000395794 RPUSD4Q96CM3 377 aaKnown RBP9.85□□□□□ -0.83
CXCL12-205ENST00000395794 PFDN5Q99471 154 aa9.85□□□□□ -0.83
CXCL12-205ENST00000395794 NIPSNAP3BQ9BS92 247 aa9.85□□□□□ -0.83
CXCL12-205ENST00000395794 PTTG2Q9NZH5 202 aa9.85□□□□□ -0.83
CXCL12-205ENST00000395794 DKK2Q9UBU2 259 aa9.85□□□□□ -0.83
CXCL12-205ENST00000395794 WDR83OSQ9Y284 106 aa9.85□□□□□ -0.83
CXCL12-205ENST00000395794 A6NHS1 94 aa9.84□□□□□ -0.83
CXCL12-205ENST00000395794 BOLA2-SMG1P6H3BVE0 249 aa9.84□□□□□ -0.83
CXCL12-205ENST00000395794 M0R2Z0 102 aa9.84□□□□□ -0.83
CXCL12-205ENST00000395794 PRAF2O60831 178 aa9.84□□□□□ -0.83
CXCL12-205ENST00000395794 TMEM37Q8WXS4 190 aa9.84□□□□□ -0.83
CXCL12-205ENST00000395794 C11orf1Q9H5F2 150 aa9.84□□□□□ -0.83
CXCL12-205ENST00000395794 YTHDF2Q9Y5A9 579 aaKnown RBP9.84□□□□□ -0.83
CXCL12-205ENST00000395794 BIRC6Q9NR09 4857 aa9.83□□□□□ -0.84
CXCL12-205ENST00000395794 IGSF23A1L1A6 192 aa9.83□□□□□ -0.84
CXCL12-205ENST00000395794 MPDU1O75352 247 aa9.83□□□□□ -0.84
CXCL12-205ENST00000395794 SNRPCP09234 159 aaKnown RBP9.83□□□□□ -0.84
CXCL12-205ENST00000395794 RPL29P47914 159 aaKnown RBP9.83□□□□□ -0.84
CXCL12-205ENST00000395794 DEFA1P59665 94 aa9.83□□□□□ -0.84
CXCL12-205ENST00000395794 DEFA3P59666 94 aa9.83□□□□□ -0.84
CXCL12-205ENST00000395794 OPCMLQ14982 345 aa9.83□□□□□ -0.84
CXCL12-205ENST00000395794 GUK1Q16774 197 aa9.83□□□□□ -0.84
CXCL12-205ENST00000395794 VWC2Q2TAL6 325 aa9.83□□□□□ -0.84
CXCL12-205ENST00000395794 MIC13Q5XKP0 118 aa9.83□□□□□ -0.84
CXCL12-205ENST00000395794 OR10J6PQ8NGY7 276 aa9.83□□□□□ -0.84
CXCL12-205ENST00000395794 SLC25A31Q9H0C2 315 aa9.83□□□□□ -0.84
CXCL12-205ENST00000395794 ZNF331Q9NQX6 463 aaPredicted RBP9.83□□□□□ -0.84
CXCL12-205ENST00000395794 SLC39A9Q9NUM3 307 aa9.83□□□□□ -0.84
CXCL12-205ENST00000395794 PXMP4Q9Y6I8 212 aa9.83□□□□□ -0.84
CXCL12-205ENST00000395794 TRAV12-2A0A075B6T6 113 aa9.82□□□□□ -0.84
CXCL12-205ENST00000395794 INMT-MINDY4F8WBC2 141 aa9.82□□□□□ -0.84
CXCL12-205ENST00000395794 MRPS12O15235 138 aaKnown RBP9.82□□□□□ -0.84
CXCL12-205ENST00000395794 P0DMU3 169 aa9.82□□□□□ -0.84
CXCL12-205ENST00000395794 FAM231AP0DMU4 169 aa9.82□□□□□ -0.84
CXCL12-205ENST00000395794 FAM231CP0DMU5 169 aa9.82□□□□□ -0.84
CXCL12-205ENST00000395794 HTN3P15516 51 aa9.82□□□□□ -0.84
CXCL12-205ENST00000395794 FGF7P21781 194 aa9.82□□□□□ -0.84
CXCL12-205ENST00000395794 DAD1P61803 113 aa9.82□□□□□ -0.84
CXCL12-205ENST00000395794 CYCSP99999 105 aaKnown RBP9.82□□□□□ -0.84
CXCL12-205ENST00000395794 IL15RAQ13261 267 aa9.82□□□□□ -0.84
CXCL12-205ENST00000395794 OXA1LQ15070 435 aa9.82□□□□□ -0.84
CXCL12-205ENST00000395794 BAP18Q8IXM2 172 aa9.82□□□□□ -0.84
CXCL12-205ENST00000395794 TMEM256Q8N2U0 113 aa9.82□□□□□ -0.84
CXCL12-205ENST00000395794 FAM210BQ96KR6 192 aa9.82□□□□□ -0.84
CXCL12-205ENST00000395794 LINC01587Q99440 93 aa9.82□□□□□ -0.84
CXCL12-205ENST00000395794 ZNF705GA8MUZ8 300 aaPredicted RBP9.81□□□□□ -0.84
CXCL12-205ENST00000395794 E5RGE8 158 aa9.81□□□□□ -0.84
CXCL12-205ENST00000395794 H3BTX0 84 aa9.81□□□□□ -0.84
CXCL12-205ENST00000395794 CRXO43186 299 aaPredicted RBP9.81□□□□□ -0.84
CXCL12-205ENST00000395794 TSPOP30536 169 aa9.81□□□□□ -0.84
CXCL12-205ENST00000395794 CHAC2Q8WUX2 184 aa9.81□□□□□ -0.84
CXCL12-205ENST00000395794 NMES1Q9C002 83 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms