RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 IFNA14P01570 189 aa0.15□□□□□ -2.39
RNU6-440P-201ENST00000390882 APOA2P02652 100 aa0.15□□□□□ -2.39
RNU6-440P-201ENST00000390882 HSD11B1P28845 292 aa0.15□□□□□ -2.39
RNU6-440P-201ENST00000390882 CIRBPQ14011 172 aaKnown RBP0.15□□□□□ -2.39
RNU6-440P-201ENST00000390882 SCGB2B2Q4G0G5 96 aa0.15□□□□□ -2.39
RNU6-440P-201ENST00000390882 GLIPR1L1Q6UWM5 242 aa0.15□□□□□ -2.39
RNU6-440P-201ENST00000390882 Q6ZS92 163 aa0.15□□□□□ -2.39
RNU6-440P-201ENST00000390882 S100A7AQ86SG5 101 aa0.15□□□□□ -2.39
RNU6-440P-201ENST00000390882 LRRC18Q8N456 261 aa0.15□□□□□ -2.39
RNU6-440P-201ENST00000390882 OR4K15Q8NH41 348 aa0.15□□□□□ -2.39
RNU6-440P-201ENST00000390882 CHCHD1Q96BP2 118 aaKnown RBP0.15□□□□□ -2.39
RNU6-440P-201ENST00000390882 DGCR14Q96DF8 476 aaKnown RBP0.15□□□□□ -2.39
RNU6-440P-201ENST00000390882 CHMP6Q96FZ7 201 aa0.15□□□□□ -2.39
RNU6-440P-201ENST00000390882 ZNF714Q96N38 554 aa0.15□□□□□ -2.39
RNU6-440P-201ENST00000390882 OR2J1Q9GZK6 312 aa0.15□□□□□ -2.39
RNU6-440P-201ENST00000390882 TCEAL2Q9H3H9 227 aaPredicted RBP0.15□□□□□ -2.39
RNU6-440P-201ENST00000390882 POPDC3Q9HBV1 291 aa0.15□□□□□ -2.39
RNU6-440P-201ENST00000390882 BCORL1Q5H9F3 1711 aa0.15□□□□□ -2.39
RNU6-440P-201ENST00000390882 BCL9O00512 1426 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 TRAV23DV6A0A075B6W5 121 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 TRAV5A0A0B4J249 113 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 TRBV30A0A0K0K1B3 111 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 C9orf170A2RU37 121 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 NUPR2A6NF83 97 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 C5orf67F2Z3F1 127 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 H7C1C5 153 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 K7ERJ3 54 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 HIST1H2BKO60814 126 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 TRGC2P03986 189 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 HIST1H2BJP06899 126 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 CD14P08571 375 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 CXCL1P09341 107 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 SPINT3P49223 89 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 INSL3P51460 131 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 ZNF137PP52743 207 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 ARPP19P56211 112 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 FXYD6P3P58550 94 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 LCN6P62502 163 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 MRPS25P82663 173 aaKnown RBP0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 DHRS4L2Q6PKH6 230 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 LINC00299Q6ZSB3 139 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 ATOH7Q8N100 152 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 PXT1Q8NFP0 134 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 PPTC7Q8NI37 304 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 ZHX1-C8orf76Q96EF9 292 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 CACYBPQ9HB71 228 aaKnown RBP0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 PRNDQ9UKY0 176 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 RNF11Q9Y3C5 154 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 HEATR1Q9H583 2144 aaKnown RBP0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 DOCK4Q8N1I0 1966 aa0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 MYO18AQ92614 2054 aaKnown RBP0.14□□□□□ -2.39
RNU6-440P-201ENST00000390882 FANCMQ8IYD8 2048 aa0.13□□□□□ -2.39
RNU6-440P-201ENST00000390882 SNRNP200O75643 2136 aaKnown RBP0.13□□□□□ -2.39
RNU6-440P-201ENST00000390882 A0A096LPI6 279 aa0.13□□□□□ -2.39
RNU6-440P-201ENST00000390882 RIIAD1A6NNX1 92 aa0.13□□□□□ -2.39
RNU6-440P-201ENST00000390882 RER1O15258 196 aa0.13□□□□□ -2.39
RNU6-440P-201ENST00000390882 LYRM1O43325 122 aa0.13□□□□□ -2.39
RNU6-440P-201ENST00000390882 CCL4P13236 92 aa0.13□□□□□ -2.39
RNU6-440P-201ENST00000390882 IDO1P14902 403 aa0.13□□□□□ -2.39
RNU6-440P-201ENST00000390882 OGNP20774 298 aaKnown RBP0.13□□□□□ -2.39
RNU6-440P-201ENST00000390882 PHBP35232 272 aa0.13□□□□□ -2.39
RNU6-440P-201ENST00000390882 CAPZBP47756 277 aa0.13□□□□□ -2.39
RNU6-440P-201ENST00000390882 TMBIM6P55061 237 aa0.13□□□□□ -2.39
RNU6-440P-201ENST00000390882 SPINK7P58062 85 aa0.13□□□□□ -2.39
RNU6-440P-201ENST00000390882 EIF3IQ13347 325 aaKnown RBP0.13□□□□□ -2.39
RNU6-440P-201ENST00000390882 C6orf52Q5T4I8 152 aa0.13□□□□□ -2.39
RNU6-440P-201ENST00000390882 Q6ZQY7 126 aa0.13□□□□□ -2.39
RNU6-440P-201ENST00000390882 CEP19Q96LK0 163 aa0.13□□□□□ -2.39
RNU6-440P-201ENST00000390882 GPX7Q96SL4 187 aaPredicted RBP0.13□□□□□ -2.39
RNU6-440P-201ENST00000390882 PBDC1Q9BVG4 233 aa0.13□□□□□ -2.39
RNU6-440P-201ENST00000390882 SH3BGRL3Q9H299 93 aa0.13□□□□□ -2.39
RNU6-440P-201ENST00000390882 LYRM2Q9NU23 88 aaPredicted RBP0.13□□□□□ -2.39
RNU6-440P-201ENST00000390882 JPT1Q9UK76 154 aa0.13□□□□□ -2.39
RNU6-440P-201ENST00000390882 SSR3Q9UNL2 185 aa0.13□□□□□ -2.39
RNU6-440P-201ENST00000390882 PTPRDP23468 1912 aa0.13□□□□□ -2.39
RNU6-440P-201ENST00000390882 KIAA1107Q9UPP5 1409 aa0.13□□□□□ -2.39
RNU6-440P-201ENST00000390882 EIF3AQ14152 1382 aaKnown RBP0.12□□□□□ -2.39
RNU6-440P-201ENST00000390882 ODAMA1E959 279 aa0.12□□□□□ -2.39
RNU6-440P-201ENST00000390882 ZNF727A8MUV8 499 aa0.12□□□□□ -2.39
RNU6-440P-201ENST00000390882 GPR31O00270 319 aa0.12□□□□□ -2.39
RNU6-440P-201ENST00000390882 KDELR1P24390 212 aa0.12□□□□□ -2.39
RNU6-440P-201ENST00000390882 RPL35P42766 123 aaKnown RBP0.12□□□□□ -2.39
RNU6-440P-201ENST00000390882 RPL37AP61513 92 aaKnown RBP0.12□□□□□ -2.39
RNU6-440P-201ENST00000390882 ARF6P62330 175 aa0.12□□□□□ -2.39
RNU6-440P-201ENST00000390882 GNG5P63218 68 aa0.12□□□□□ -2.39
RNU6-440P-201ENST00000390882 SNCBQ16143 134 aa0.12□□□□□ -2.39
RNU6-440P-201ENST00000390882 AKR1C8PQ5T2L2 129 aa0.12□□□□□ -2.39
RNU6-440P-201ENST00000390882 OR13C6PQ8NH95 151 aa0.12□□□□□ -2.39
RNU6-440P-201ENST00000390882 TSKUQ8WUA8 353 aa0.12□□□□□ -2.39
RNU6-440P-201ENST00000390882 MALSU1Q96EH3 234 aa0.12□□□□□ -2.39
RNU6-440P-201ENST00000390882 PAIP2Q9BPZ3 127 aaKnown RBP0.12□□□□□ -2.39
RNU6-440P-201ENST00000390882 GINS3Q9BRX5 216 aa0.12□□□□□ -2.39
RNU6-440P-201ENST00000390882 RTL8AQ9BWD3 113 aa0.12□□□□□ -2.39
RNU6-440P-201ENST00000390882 OR2H1Q9GZK4 316 aa0.12□□□□□ -2.39
RNU6-440P-201ENST00000390882 BOKQ9UMX3 212 aaPredicted RBP0.12□□□□□ -2.39
RNU6-440P-201ENST00000390882 CHD3Q12873 2000 aaKnown RBP0.12□□□□□ -2.39
RNU6-440P-201ENST00000390882 ZCCHC11Q5TAX3 1644 aaKnown RBP0.12□□□□□ -2.39
RNU6-440P-201ENST00000390882 ANKRD31Q8N7Z5 1873 aa0.12□□□□□ -2.39
RNU6-440P-201ENST00000390882 USP54Q70EL1 1684 aa0.11□□□□□ -2.39
RNU6-440P-201ENST00000390882 RTL9Q8NET4 1388 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms