RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 SRRM4A7MD48 611 aaKnown RBP13.85□□□□□ -0.19
COL4A3BP-203ENST00000380494 TRACP01848 142 aa13.85□□□□□ -0.19
COL4A3BP-203ENST00000380494 C5orf64Q2M2E5 130 aa13.85□□□□□ -0.19
COL4A3BP-203ENST00000380494 BUB1B-PAK6H3BSN5 160 aa13.84□□□□□ -0.19
COL4A3BP-203ENST00000380494 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.84□□□□□ -0.19
COL4A3BP-203ENST00000380494 KLHDC3Q9BQ90 382 aa13.84□□□□□ -0.19
COL4A3BP-203ENST00000380494 TMEM14CQ9P0S9 112 aa13.84□□□□□ -0.19
COL4A3BP-203ENST00000380494 IGKV1D-17A0A075B6S4 117 aa13.84□□□□□ -0.19
COL4A3BP-203ENST00000380494 FOXG1P55316 489 aaPredicted RBP13.84□□□□□ -0.19
COL4A3BP-203ENST00000380494 IL15RAQ13261 267 aa13.84□□□□□ -0.19
COL4A3BP-203ENST00000380494 C7orf69Q9H7B7 122 aa13.84□□□□□ -0.19
COL4A3BP-203ENST00000380494 MRPL51Q4U2R6 128 aaKnown RBP13.84□□□□□ -0.19
COL4A3BP-203ENST00000380494 M0R1W7 72 aa13.84□□□□□ -0.19
COL4A3BP-203ENST00000380494 CD24P25063 80 aa13.84□□□□□ -0.19
COL4A3BP-203ENST00000380494 C17orf82Q86X59 251 aaPredicted RBP13.84□□□□□ -0.19
COL4A3BP-203ENST00000380494 MYO7AQ13402 2215 aa13.83□□□□□ -0.19
COL4A3BP-203ENST00000380494 SLC25A16P16260 332 aa13.83□□□□□ -0.2
COL4A3BP-203ENST00000380494 SPTBP11277 2137 aa13.83□□□□□ -0.2
COL4A3BP-203ENST00000380494 DEFB125Q8N687 156 aa13.83□□□□□ -0.2
COL4A3BP-203ENST00000380494 DPH3Q96FX2 82 aa13.83□□□□□ -0.2
COL4A3BP-203ENST00000380494 IGHV2-70DA0A0C4DH43 119 aa13.83□□□□□ -0.2
COL4A3BP-203ENST00000380494 NDUFB8O95169 186 aa13.83□□□□□ -0.2
COL4A3BP-203ENST00000380494 HLA-DRB4P13762 266 aa13.83□□□□□ -0.2
COL4A3BP-203ENST00000380494 LMO1P25800 156 aa13.83□□□□□ -0.2
COL4A3BP-203ENST00000380494 HLA-DRB4X5D2U9 266 aa13.83□□□□□ -0.2
COL4A3BP-203ENST00000380494 C2orf66Q6UXQ4 117 aa13.82□□□□□ -0.2
COL4A3BP-203ENST00000380494 LCNL1Q6ZST4 164 aa13.82□□□□□ -0.2
COL4A3BP-203ENST00000380494 SPXQ9BT56 116 aa13.82□□□□□ -0.2
COL4A3BP-203ENST00000380494 TP53TG1Q9Y2A0 90 aa13.82□□□□□ -0.2
COL4A3BP-203ENST00000380494 FCN3O75636 299 aa13.82□□□□□ -0.2
COL4A3BP-203ENST00000380494 CEACAM8P31997 349 aaPredicted RBP13.82□□□□□ -0.2
COL4A3BP-203ENST00000380494 VOPP1Q96AW1 172 aa13.82□□□□□ -0.2
COL4A3BP-203ENST00000380494 NDUFA4L2Q9NRX3 87 aa13.82□□□□□ -0.2
COL4A3BP-203ENST00000380494 SPACA3Q8IXA5 215 aa13.82□□□□□ -0.2
COL4A3BP-203ENST00000380494 CRIPAKQ8N1N5 446 aa13.82□□□□□ -0.2
COL4A3BP-203ENST00000380494 PRO1854Q9UHT4 67 aa13.82□□□□□ -0.2
COL4A3BP-203ENST00000380494 TRBV19A0A075B6N1 114 aa13.81□□□□□ -0.2
COL4A3BP-203ENST00000380494 B3GALT5-AS1P59052 145 aa13.81□□□□□ -0.2
COL4A3BP-203ENST00000380494 USMG5Q96IX5 58 aa13.81□□□□□ -0.2
COL4A3BP-203ENST00000380494 VGLL1Q99990 258 aa13.81□□□□□ -0.2
COL4A3BP-203ENST00000380494 SIGLEC8Q9NYZ4 499 aa13.81□□□□□ -0.2
COL4A3BP-203ENST00000380494 HLA-DMBP28068 263 aa13.81□□□□□ -0.2
COL4A3BP-203ENST00000380494 PRSS57Q6UWY2 283 aa13.81□□□□□ -0.2
COL4A3BP-203ENST00000380494 ZNF114Q8NC26 417 aa13.81□□□□□ -0.2
COL4A3BP-203ENST00000380494 ZSWIM8A7E2V4 1837 aa13.81□□□□□ -0.2
COL4A3BP-203ENST00000380494 POLR2AP24928 1970 aaKnown RBP13.81□□□□□ -0.2
COL4A3BP-203ENST00000380494 GAGE12JA6NER3 117 aa13.81□□□□□ -0.2
COL4A3BP-203ENST00000380494 GAGE7O76087 117 aa13.81□□□□□ -0.2
COL4A3BP-203ENST00000380494 GAGE12FP0CL80 117 aa13.81□□□□□ -0.2
COL4A3BP-203ENST00000380494 GAGE12GP0CL81 117 aa13.81□□□□□ -0.2
COL4A3BP-203ENST00000380494 GAGE12IP0CL82 117 aa13.81□□□□□ -0.2
COL4A3BP-203ENST00000380494 GAGE4Q13068 117 aa13.81□□□□□ -0.2
COL4A3BP-203ENST00000380494 PRB3Q04118 309 aaPredicted RBP13.81□□□□□ -0.2
COL4A3BP-203ENST00000380494 VMO1Q7Z5L0 202 aa13.81□□□□□ -0.2
COL4A3BP-203ENST00000380494 PRIMA1Q86XR5 153 aa13.81□□□□□ -0.2
COL4A3BP-203ENST00000380494 PYGO2Q9BRQ0 406 aa13.81□□□□□ -0.2
COL4A3BP-203ENST00000380494 C8orf49Q96NF6 230 aa13.81□□□□□ -0.2
COL4A3BP-203ENST00000380494 E9PLN8 166 aa13.8□□□□□ -0.2
COL4A3BP-203ENST00000380494 ETV2O00321 342 aaPredicted RBP13.8□□□□□ -0.2
COL4A3BP-203ENST00000380494 NTN3O00634 580 aaPredicted RBP13.8□□□□□ -0.2
COL4A3BP-203ENST00000380494 ATG2BQ96BY7 2078 aa13.8□□□□□ -0.2
COL4A3BP-203ENST00000380494 SRD5A1P18405 259 aa13.8□□□□□ -0.2
COL4A3BP-203ENST00000380494 ANK1P16157 1881 aa13.8□□□□□ -0.2
COL4A3BP-203ENST00000380494 IGKV1-39P01597 117 aa13.8□□□□□ -0.2
COL4A3BP-203ENST00000380494 IGKV1D-39P04432 117 aa13.8□□□□□ -0.2
COL4A3BP-203ENST00000380494 HAPLN4Q86UW8 402 aa13.79□□□□□ -0.2
COL4A3BP-203ENST00000380494 CCL25O15444 150 aa13.79□□□□□ -0.2
COL4A3BP-203ENST00000380494 FGF6P10767 208 aa13.79□□□□□ -0.2
COL4A3BP-203ENST00000380494 SCN2AQ99250 2005 aa13.79□□□□□ -0.2
COL4A3BP-203ENST00000380494 GAGE5Q13069 117 aa13.79□□□□□ -0.2
COL4A3BP-203ENST00000380494 GAGE6Q13070 117 aa13.79□□□□□ -0.2
COL4A3BP-203ENST00000380494 MLANAQ16655 118 aa13.79□□□□□ -0.2
COL4A3BP-203ENST00000380494 HEATR5BQ9P2D3 2071 aa13.79□□□□□ -0.2
COL4A3BP-203ENST00000380494 A0A1W2PPI3 338 aa13.79□□□□□ -0.2
COL4A3BP-203ENST00000380494 IGHG4P01861 327 aa13.79□□□□□ -0.2
COL4A3BP-203ENST00000380494 LINC00205P59089 165 aa13.79□□□□□ -0.2
COL4A3BP-203ENST00000380494 CDPF1Q6NVV7 123 aa13.79□□□□□ -0.2
COL4A3BP-203ENST00000380494 RNASE8Q8TDE3 154 aaKnown RBP13.78□□□□□ -0.2
COL4A3BP-203ENST00000380494 PRB4P10163 310 aaPredicted RBP13.78□□□□□ -0.2
COL4A3BP-203ENST00000380494 C12orf74Q32Q52 190 aa13.78□□□□□ -0.2
COL4A3BP-203ENST00000380494 H3BMG7 143 aa13.78□□□□□ -0.2
COL4A3BP-203ENST00000380494 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.77□□□□□ -0.2
COL4A3BP-203ENST00000380494 PRSS47A8MTI9 375 aa13.77□□□□□ -0.2
COL4A3BP-203ENST00000380494 F8VRH5 84 aa13.77□□□□□ -0.2
COL4A3BP-203ENST00000380494 IGKV1-16P04430 117 aa13.77□□□□□ -0.2
COL4A3BP-203ENST00000380494 HS3ST6Q96QI5 342 aa13.77□□□□□ -0.2
COL4A3BP-203ENST00000380494 ZNF833PQ6ZTB9 187 aa13.77□□□□□ -0.2
COL4A3BP-203ENST00000380494 I3L3M4 83 aa13.77□□□□□ -0.21
COL4A3BP-203ENST00000380494 WFDC12Q8WWY7 111 aa13.77□□□□□ -0.21
COL4A3BP-203ENST00000380494 IGHV3-73A0A0B4J1V6 119 aa13.76□□□□□ -0.21
COL4A3BP-203ENST00000380494 K7EN84 100 aa13.76□□□□□ -0.21
COL4A3BP-203ENST00000380494 C6orf226Q5I0X4 101 aa13.76□□□□□ -0.21
COL4A3BP-203ENST00000380494 A0A087WX48 190 aa13.76□□□□□ -0.21
COL4A3BP-203ENST00000380494 ZNF672Q499Z4 452 aaPredicted RBP13.76□□□□□ -0.21
COL4A3BP-203ENST00000380494 H3BRN7 92 aa13.76□□□□□ -0.21
COL4A3BP-203ENST00000380494 LTAP01374 205 aa13.76□□□□□ -0.21
COL4A3BP-203ENST00000380494 VWC2Q2TAL6 325 aa13.76□□□□□ -0.21
COL4A3BP-203ENST00000380494 THAP8Q8NA92 274 aa13.76□□□□□ -0.21
COL4A3BP-203ENST00000380494 PLXNA3P51805 1871 aa13.76□□□□□ -0.21
COL4A3BP-203ENST00000380494 CSRP2Q16527 193 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms