RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 Q86TA4 180 aa8.19□□□□□ -1.1
POLR2J3-201ENST00000379340 C5orf56Q8N8D9 126 aa8.19□□□□□ -1.1
POLR2J3-201ENST00000379340 NHLRC2Q8NBF2 726 aa8.19□□□□□ -1.1
POLR2J3-201ENST00000379340 TSKUQ8WUA8 353 aa8.19□□□□□ -1.1
POLR2J3-201ENST00000379340 HSPB9Q9BQS6 159 aa8.19□□□□□ -1.1
POLR2J3-201ENST00000379340 NAT8BQ9UHF3 227 aa8.19□□□□□ -1.1
POLR2J3-201ENST00000379340 RPH3ALQ9UNE2 315 aa8.19□□□□□ -1.1
POLR2J3-201ENST00000379340 TLN2Q9Y4G6 2542 aa8.19□□□□□ -1.1
POLR2J3-201ENST00000379340 VPS13CQ709C8 3753 aa8.19□□□□□ -1.1
POLR2J3-201ENST00000379340 FBN1P35555 2871 aaKnown RBP8.19□□□□□ -1.1
POLR2J3-201ENST00000379340 FBLL1A6NHQ2 334 aaKnown RBP8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 BMPR1BO00238 502 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 RPL7P18124 248 aaKnown RBP8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 PSG9Q00887 426 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 ECSCRQ19T08 205 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 SIGLEC15Q6ZMC9 328 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 ATP5L2Q7Z4Y8 100 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 GBGT1Q8N5D6 347 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 OR4B1Q8NGF8 309 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 ZNF502Q8TBZ5 544 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 ZNF414Q96IQ9 312 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 AAMDCQ9H7C9 122 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 ZNF331Q9NQX6 463 aaPredicted RBP8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 RABAC1Q9UI14 185 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 ZFP30Q9Y2G7 519 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 SOX21Q9Y651 276 aaPredicted RBP8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 C19orf71A6NCJ1 209 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 FAM231BA6NCW3 169 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 A8MWL6 223 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 ZNF253O75346 499 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 CTSGP08311 255 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 ESDP10768 282 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 SLC25A16P16260 332 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 CRISP2P16562 243 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 GATA3P23771 443 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 Q0VG73 95 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 TMEM136Q6ZRR5 245 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 WFDC11Q8NEX6 87 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 OR5R1Q8NH85 324 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 DAZAP1Q96EP5 407 aaKnown RBP8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 PRSS22Q9GZN4 317 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 GFRA4Q9GZZ7 299 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 RPP21Q9H633 154 aaKnown RBP8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 S4R3C0 116 aa8.18□□□□□ -1.1
POLR2J3-201ENST00000379340 TRBV7-1A0A0A6YYK4 115 aa8.17□□□□□ -1.1
POLR2J3-201ENST00000379340 TRAV40A0A0B4J280 105 aa8.17□□□□□ -1.1
POLR2J3-201ENST00000379340 OR2T8A6NH00 312 aa8.17□□□□□ -1.1
POLR2J3-201ENST00000379340 H3BTX0 84 aa8.17□□□□□ -1.1
POLR2J3-201ENST00000379340 P01737 135 aa8.17□□□□□ -1.1
POLR2J3-201ENST00000379340 MSMBP08118 114 aa8.17□□□□□ -1.1
POLR2J3-201ENST00000379340 SNRPCP09234 159 aaKnown RBP8.17□□□□□ -1.1
POLR2J3-201ENST00000379340 FOSL1P15407 271 aa8.17□□□□□ -1.1
POLR2J3-201ENST00000379340 TCL1AP56279 114 aa8.17□□□□□ -1.1
POLR2J3-201ENST00000379340 RHOGP84095 191 aa8.17□□□□□ -1.1
POLR2J3-201ENST00000379340 JOSD1Q15040 202 aaPredicted RBP8.17□□□□□ -1.1
POLR2J3-201ENST00000379340 OR10J3Q5JRS4 329 aa8.17□□□□□ -1.1
POLR2J3-201ENST00000379340 PRR27Q6MZM9 219 aa8.17□□□□□ -1.1
POLR2J3-201ENST00000379340 GOLT1AQ6ZVE7 132 aa8.17□□□□□ -1.1
POLR2J3-201ENST00000379340 EEF1AKMT3Q96AZ1 226 aa8.17□□□□□ -1.1
POLR2J3-201ENST00000379340 GSN-AS1Q9NRJ2 163 aa8.17□□□□□ -1.1
POLR2J3-201ENST00000379340 IGHV4-30-2A0A087WSY4 118 aa8.16□□□□□ -1.1
POLR2J3-201ENST00000379340 FAM223BA6NKX1 122 aa8.16□□□□□ -1.1
POLR2J3-201ENST00000379340 NPIPB6E9PJ23 425 aa8.16□□□□□ -1.1
POLR2J3-201ENST00000379340 M0QZK8 103 aa8.16□□□□□ -1.1
POLR2J3-201ENST00000379340 CSN1S1P47710 185 aa8.16□□□□□ -1.1
POLR2J3-201ENST00000379340 PAFAH1B2P68402 229 aa8.16□□□□□ -1.1
POLR2J3-201ENST00000379340 C15orf32Q32M92 178 aa8.16□□□□□ -1.1
POLR2J3-201ENST00000379340 FAM223AQ8IWN6 122 aa8.16□□□□□ -1.1
POLR2J3-201ENST00000379340 EXOC3-AS1Q8N2X6 119 aa8.16□□□□□ -1.1
POLR2J3-201ENST00000379340 NUP35Q8NFH5 326 aa8.16□□□□□ -1.1
POLR2J3-201ENST00000379340 TRAV41A0A0B4J266 112 aa8.15□□□□□ -1.1
POLR2J3-201ENST00000379340 TRAV20A0A0B4J274 112 aa8.15□□□□□ -1.1
POLR2J3-201ENST00000379340 B4DSR2 109 aa8.15□□□□□ -1.1
POLR2J3-201ENST00000379340 DIRC3C9JPN6 131 aa8.15□□□□□ -1.1
POLR2J3-201ENST00000379340 H3BUA1 57 aa8.15□□□□□ -1.1
POLR2J3-201ENST00000379340 BRI3O95415 125 aa8.15□□□□□ -1.1
POLR2J3-201ENST00000379340 IGLV2-11P01706 119 aa8.15□□□□□ -1.1
POLR2J3-201ENST00000379340 TPPP2P59282 170 aa8.15□□□□□ -1.1
POLR2J3-201ENST00000379340 PSG3Q16557 428 aa8.15□□□□□ -1.1
POLR2J3-201ENST00000379340 C19orf54Q5BKX5 351 aa8.15□□□□□ -1.1
POLR2J3-201ENST00000379340 MRPL54Q6P161 138 aaKnown RBP8.15□□□□□ -1.1
POLR2J3-201ENST00000379340 NEU1Q99519 415 aa8.15□□□□□ -1.1
POLR2J3-201ENST00000379340 A0A087X0K7 114 aa8.14□□□□□ -1.11
POLR2J3-201ENST00000379340 HIGD1CA8MV81 97 aa8.14□□□□□ -1.11
POLR2J3-201ENST00000379340 CA1P00915 261 aaPredicted RBP8.14□□□□□ -1.11
POLR2J3-201ENST00000379340 IGHV3-23P01764 117 aa8.14□□□□□ -1.11
POLR2J3-201ENST00000379340 APCSP02743 223 aa8.14□□□□□ -1.11
POLR2J3-201ENST00000379340 GPR183P32249 361 aa8.14□□□□□ -1.11
POLR2J3-201ENST00000379340 RAB4BP61018 213 aa8.14□□□□□ -1.11
POLR2J3-201ENST00000379340 RELQ04864 619 aaPredicted RBP8.14□□□□□ -1.11
POLR2J3-201ENST00000379340 C16orf54Q6UWD8 224 aa8.14□□□□□ -1.11
POLR2J3-201ENST00000379340 PRNTQ86SH4 94 aa8.14□□□□□ -1.11
POLR2J3-201ENST00000379340 KRTAP1-3Q8IUG1 177 aa8.14□□□□□ -1.11
POLR2J3-201ENST00000379340 PIFOQ8TCI5 191 aa8.14□□□□□ -1.11
POLR2J3-201ENST00000379340 PSG8Q9UQ74 426 aa8.14□□□□□ -1.11
POLR2J3-201ENST00000379340 WNK2Q9Y3S1 2297 aa8.14□□□□□ -1.11
POLR2J3-201ENST00000379340 SPINK4O60575 86 aa8.14□□□□□ -1.11
POLR2J3-201ENST00000379340 IGF1P05019 195 aa8.14□□□□□ -1.11
POLR2J3-201ENST00000379340 ATP5G2Q06055 141 aa8.14□□□□□ -1.11
POLR2J3-201ENST00000379340 C1orf194Q5T5A4 169 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms