RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 MEOX2P50222 304 aa11.03□□□□□ -0.64
SS18L1-202ENST00000370848 SAV1Q9H4B6 383 aaPredicted RBP11.03□□□□□ -0.64
SS18L1-202ENST00000370848 CLEC5AQ9NY25 188 aa11.03□□□□□ -0.64
SS18L1-202ENST00000370848 RFNGQ9Y644 331 aa11.03□□□□□ -0.64
SS18L1-202ENST00000370848 HLA-DRB4X5D2U9 266 aa11.03□□□□□ -0.64
SS18L1-202ENST00000370848 ELOA3CA0A087WX78 387 aaPredicted RBP11.02□□□□□ -0.65
SS18L1-202ENST00000370848 CXorf65A6NEN9 183 aa11.02□□□□□ -0.65
SS18L1-202ENST00000370848 MPDU1O75352 247 aa11.02□□□□□ -0.65
SS18L1-202ENST00000370848 GIPP09681 153 aaPredicted RBP11.02□□□□□ -0.65
SS18L1-202ENST00000370848 FXYD7P58549 80 aa11.02□□□□□ -0.65
SS18L1-202ENST00000370848 SPATA31B1PQ5VZV4 182 aa11.02□□□□□ -0.65
SS18L1-202ENST00000370848 FOXI2Q6ZQN5 318 aa11.02□□□□□ -0.65
SS18L1-202ENST00000370848 OR1L4Q8NGR5 311 aa11.02□□□□□ -0.65
SS18L1-202ENST00000370848 GATAD1Q8WUU5 269 aa11.02□□□□□ -0.65
SS18L1-202ENST00000370848 C11orf68Q9H3H3 251 aaKnown RBP11.02□□□□□ -0.65
SS18L1-202ENST00000370848 SLC17A3O00476 420 aa11.01□□□□□ -0.65
SS18L1-202ENST00000370848 SPP1P10451 314 aa11.01□□□□□ -0.65
SS18L1-202ENST00000370848 MORN3Q6PF18 240 aaPredicted RBP11.01□□□□□ -0.65
SS18L1-202ENST00000370848 KLK5Q9Y337 293 aaPredicted RBP11.01□□□□□ -0.65
SS18L1-202ENST00000370848 A0A0J9YX75 114 aa11□□□□□ -0.65
SS18L1-202ENST00000370848 H3BQ15 152 aa11□□□□□ -0.65
SS18L1-202ENST00000370848 ZNF705DP0CH99 300 aaPredicted RBP11□□□□□ -0.65
SS18L1-202ENST00000370848 ZNF705BP0CI00 300 aaPredicted RBP11□□□□□ -0.65
SS18L1-202ENST00000370848 IGLC2P0DOY2 106 aa11□□□□□ -0.65
SS18L1-202ENST00000370848 PMS2P11Q13670 270 aa11□□□□□ -0.65
SS18L1-202ENST00000370848 SAMD13Q5VXD3 122 aa11□□□□□ -0.65
SS18L1-202ENST00000370848 S100A7AQ86SG5 101 aa11□□□□□ -0.65
SS18L1-202ENST00000370848 BPIFA4PQ86YQ2 179 aa11□□□□□ -0.65
SS18L1-202ENST00000370848 OR4B1Q8NGF8 309 aa11□□□□□ -0.65
SS18L1-202ENST00000370848 OR11H2Q8NH07 326 aa11□□□□□ -0.65
SS18L1-202ENST00000370848 PFDN5Q99471 154 aa11□□□□□ -0.65
SS18L1-202ENST00000370848 RARRES2Q99969 163 aa11□□□□□ -0.65
SS18L1-202ENST00000370848 RPRMQ9NS64 109 aa11□□□□□ -0.65
SS18L1-202ENST00000370848 G3V3Q6 166 aa10.99□□□□□ -0.65
SS18L1-202ENST00000370848 LY6G6CO95867 125 aa10.99□□□□□ -0.65
SS18L1-202ENST00000370848 FAM78BQ5VT40 261 aa10.99□□□□□ -0.65
SS18L1-202ENST00000370848 LGALS9CQ6DKI2 356 aa10.99□□□□□ -0.65
SS18L1-202ENST00000370848 MIR17HGQ75NE6 70 aa10.99□□□□□ -0.65
SS18L1-202ENST00000370848 CSNK1G2-AS1Q8NCQ2 148 aa10.99□□□□□ -0.65
SS18L1-202ENST00000370848 ZNF738Q8NE65 137 aa10.99□□□□□ -0.65
SS18L1-202ENST00000370848 SLC35B3Q9H1N7 401 aa10.99□□□□□ -0.65
SS18L1-202ENST00000370848 XCL2Q9UBD3 114 aa10.99□□□□□ -0.65
SS18L1-202ENST00000370848 DEFB4AO15263 64 aa10.98□□□□□ -0.65
SS18L1-202ENST00000370848 EIF3GO75821 320 aaKnown RBP eCLIP10.98□□□□□ -0.65
SS18L1-202ENST00000370848 PYYP10082 97 aa10.98□□□□□ -0.65
SS18L1-202ENST00000370848 EBLN2Q6P2I7 272 aa10.98□□□□□ -0.65
SS18L1-202ENST00000370848 ZNF709Q8N972 641 aa10.98□□□□□ -0.65
SS18L1-202ENST00000370848 LRRC20Q8TCA0 184 aa10.98□□□□□ -0.65
SS18L1-202ENST00000370848 SLC25A2Q9BXI2 301 aa10.98□□□□□ -0.65
SS18L1-202ENST00000370848 ZNF331Q9NQX6 463 aaPredicted RBP10.98□□□□□ -0.65
SS18L1-202ENST00000370848 ZNF586Q9NXT0 402 aa10.98□□□□□ -0.65
SS18L1-202ENST00000370848 FXYD6-FXYD2A0A087WZ82 144 aa10.97□□□□□ -0.65
SS18L1-202ENST00000370848 SMLR1H3BR10 107 aa10.97□□□□□ -0.65
SS18L1-202ENST00000370848 IFNA5P01569 189 aa10.97□□□□□ -0.65
SS18L1-202ENST00000370848 PSG3Q16557 428 aa10.97□□□□□ -0.65
SS18L1-202ENST00000370848 FFAR4Q5NUL3 377 aa10.97□□□□□ -0.65
SS18L1-202ENST00000370848 LCN15Q6UWW0 184 aa10.97□□□□□ -0.65
SS18L1-202ENST00000370848 OR2T35Q8NGX2 323 aa10.97□□□□□ -0.65
SS18L1-202ENST00000370848 SCGB1C1Q8TD33 95 aa10.97□□□□□ -0.65
SS18L1-202ENST00000370848 PHLDA1Q8WV24 401 aaPredicted RBP10.97□□□□□ -0.65
SS18L1-202ENST00000370848 FAM167A-AS1Q96KT0 104 aa10.97□□□□□ -0.65
SS18L1-202ENST00000370848 AQP10Q96PS8 301 aa10.97□□□□□ -0.65
SS18L1-202ENST00000370848 HRH4Q9H3N8 390 aa10.97□□□□□ -0.65
SS18L1-202ENST00000370848 RNF24Q9Y225 148 aa10.97□□□□□ -0.65
SS18L1-202ENST00000370848 X6R8D5 127 aa10.97□□□□□ -0.65
SS18L1-202ENST00000370848 RNF222A6NCQ9 220 aa10.96□□□□□ -0.65
SS18L1-202ENST00000370848 ZNF705FA8MVS1 300 aaPredicted RBP10.96□□□□□ -0.65
SS18L1-202ENST00000370848 PRAC2D3DTV9 90 aa10.96□□□□□ -0.65
SS18L1-202ENST00000370848 C17orf112F2Z3M2 114 aa10.96□□□□□ -0.65
SS18L1-202ENST00000370848 CXCL2P19875 107 aa10.96□□□□□ -0.65
SS18L1-202ENST00000370848 CNN1P51911 297 aaKnown RBP10.96□□□□□ -0.65
SS18L1-202ENST00000370848 AMTNQ6UX39 209 aa10.96□□□□□ -0.65
SS18L1-202ENST00000370848 SAT2Q96F10 170 aaPredicted RBP10.96□□□□□ -0.65
SS18L1-202ENST00000370848 MFFQ9GZY8 342 aa10.96□□□□□ -0.65
SS18L1-202ENST00000370848 KCNIP2Q9NS61 270 aa10.96□□□□□ -0.65
SS18L1-202ENST00000370848 A8MTW9 85 aa10.95□□□□□ -0.66
SS18L1-202ENST00000370848 TCTAP57738 103 aa10.95□□□□□ -0.66
SS18L1-202ENST00000370848 NUTF2P61970 127 aaKnown RBP10.95□□□□□ -0.66
SS18L1-202ENST00000370848 PSG9Q00887 426 aa10.95□□□□□ -0.66
SS18L1-202ENST00000370848 HIST1H1AQ02539 215 aaPredicted RBP10.95□□□□□ -0.66
SS18L1-202ENST00000370848 TMEM41BQ5BJD5 291 aa10.95□□□□□ -0.66
SS18L1-202ENST00000370848 Q8NAQ8 132 aa10.95□□□□□ -0.66
SS18L1-202ENST00000370848 ASB13Q8WXK3 278 aa10.95□□□□□ -0.66
SS18L1-202ENST00000370848 RPUSD4Q96CM3 377 aaKnown RBP10.95□□□□□ -0.66
SS18L1-202ENST00000370848 SLC50A1Q9BRV3 221 aa10.95□□□□□ -0.66
SS18L1-202ENST00000370848 PARD6GQ9BYG4 376 aaPredicted RBP10.95□□□□□ -0.66
SS18L1-202ENST00000370848 TMEM14CQ9P0S9 112 aa10.95□□□□□ -0.66
SS18L1-202ENST00000370848 TNFSF18Q9UNG2 199 aa10.95□□□□□ -0.66
SS18L1-202ENST00000370848 IGHV4-28A0A0C4DH34 117 aa10.94□□□□□ -0.66
SS18L1-202ENST00000370848 ZNF705EA8MWA4 302 aaPredicted RBP10.94□□□□□ -0.66
SS18L1-202ENST00000370848 NDUFB4O95168 129 aa10.94□□□□□ -0.66
SS18L1-202ENST00000370848 RBMY1A1P0DJD3 496 aaKnown RBP10.94□□□□□ -0.66
SS18L1-202ENST00000370848 RBMY1CP0DJD4 496 aa10.94□□□□□ -0.66
SS18L1-202ENST00000370848 RBMY1FQ15415 496 aaKnown RBP10.94□□□□□ -0.66
SS18L1-202ENST00000370848 HSD17B11Q8NBQ5 300 aa10.94□□□□□ -0.66
SS18L1-202ENST00000370848 OR8A1Q8NGG7 326 aa10.94□□□□□ -0.66
SS18L1-202ENST00000370848 BLNKQ8WV28 456 aa10.94□□□□□ -0.66
SS18L1-202ENST00000370848 CLUHP3Q96NS8 147 aa10.94□□□□□ -0.66
SS18L1-202ENST00000370848 FUT9Q9Y231 359 aa10.94□□□□□ -0.66
SS18L1-202ENST00000370848 TRBV19A0A075B6N1 114 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms