RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 RTN4IP1Q8WWV3 396 aaPredicted RBP3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 FXYD5Q96DB9 178 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 SNRNP25Q9BV90 132 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 SELENOIQ9C0D9 397 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 IMUPQ9GZP8 106 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 AICDAQ9GZX7 198 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 BANF2Q9H503 90 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 DUSP21Q9H596 190 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 HEXA-AS1Q9H8Q6 139 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 SIX2Q9NPC8 291 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 CA10Q9NS85 328 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 SPRR3Q9UBC9 169 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 PYGO1Q9Y3Y4 419 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 MPC1Q9Y5U8 109 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 MED12Q93074 2177 aa3.82□□□□□ -1.8
ECHDC1-204ENST00000368292 RYR2Q92736 4967 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 MALRD1Q5VYJ5 2156 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 A0A087WXM4 84 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 FAM236AA0A1B0GUQ0 79 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 FAM236BA0A1B0GV22 79 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 TCRBV3S1A0A5B6 114 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 IZUMO1RA6ND01 250 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 SOD1P00441 154 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 STATHP02808 62 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 IFITM1P13164 125 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 OR10J1P30954 320 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 OPRK1P41145 380 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 KLK7P49862 253 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 ZNF83P51522 516 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 RPS11P62280 158 aaKnown RBP eCLIP3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 CRADDP78560 199 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 PRR3P79522 188 aaKnown RBP3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 MSMO1Q15800 293 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 TMEM236Q5W0B7 351 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 NOTCH2NLQ7Z3S9 236 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 C9orf40Q8IXQ3 194 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 SAXO1Q8IYX7 474 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 C11orf72Q8NBR9 251 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 OR10J6PQ8NGY7 276 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 RAB2BQ8WUD1 216 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 FAM3DQ96BQ1 224 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 RNF185Q96GF1 192 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 ERMAPQ96PL5 475 aaPredicted RBP3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 GPX7Q96SL4 187 aaPredicted RBP3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 DEFB127Q9H1M4 99 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 DEPPQ9NTK1 212 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 CACNG5Q9UF02 275 aa3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 MRPS16Q9Y3D3 137 aaKnown RBP3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 DYNC2H1Q8NCM8 4307 aaKnown RBP3.81□□□□□ -1.8
ECHDC1-204ENST00000368292 RYR1P21817 5038 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 SACSQ9NZJ4 4579 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 TRGV10A0A0A0MS01 117 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 CD300LBA8K4G0 201 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 ZNF705GA8MUZ8 300 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 F5H5P2 479 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 FFAR1O14842 300 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 RER1O15258 196 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 GSTZ1O43708 216 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 SRSF10O75494 262 aaKnown RBP3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 IGHV3-9P01782 118 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 CECR9P0C854 216 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 CRYGSP22914 178 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 FOXA3P55318 350 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 LINC01547P58512 204 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 TMEM258P61165 79 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 C11orf71Q6IPW1 123 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 UFSP1Q6NVU6 142 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 SLC22A24Q8N4F4 322 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 KCNRGQ8N5I3 272 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 YIPF7Q8N8F6 280 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 ZNRF1Q8ND25 227 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 BPIFB6Q8NFQ5 453 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 OR11H7Q8NGC8 314 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 OR4K13Q8NH42 304 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 OR51H1Q8NH63 302 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 OR5AK2Q8NH90 309 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 FAM57AQ8TBR7 257 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 RPS4Y2Q8TD47 263 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 ZNF431Q8TF32 576 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 KCNS1Q96KK3 526 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 FAM218AQ96MZ4 157 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 HIST1H4GQ99525 98 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 SRXN1Q9BYN0 137 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 OTORQ9NRC9 128 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 XCL2Q9UBD3 114 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 MARCOQ9UEW3 520 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 LINC00527Q9UJ94 153 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 ZNF407Q9C0G0 2248 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 KIAA1549Q9HCM3 1950 aa3.8□□□□□ -1.8
ECHDC1-204ENST00000368292 HERC2O95714 4834 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 IGHV2-26A0A0B4J1V2 119 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 TRBV5-4A0A0C4DH59 114 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 A0A0D9SG52 128 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 A0A0G2JRQ6 117 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 LOC389332A0A1B0GUA5 103 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 ARRDC5A6NEK1 342 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 OR51F1A6NGY5 319 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 H3BQ15 152 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 BMPR1BO00238 502 aa3.79□□□□□ -1.8
ECHDC1-204ENST00000368292 TRBV12-3P01733 135 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms