RNA–Protein interactions for RNA: ENST00000366742.5

MRPL55-215, Transcript of mitochondrial ribosomal protein L55, human

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-215	ENST00000366742	EBLN2	Q6P2I7	272 aa		11.3	□□□□□ -0.6
MRPL55-215	ENST00000366742	ZNF709	Q8N972	641 aa		11.3	□□□□□ -0.6
MRPL55-215	ENST00000366742	ATP5S	Q99766	215 aa		11.3	□□□□□ -0.6
MRPL55-215	ENST00000366742		H3BQ15	152 aa		11.29	□□□□□ -0.6
MRPL55-215	ENST00000366742	SNRPC	P09234	159 aa	Known RBP	11.29	□□□□□ -0.6
MRPL55-215	ENST00000366742	CXCL2	P19875	107 aa		11.29	□□□□□ -0.6
MRPL55-215	ENST00000366742	AMTN	Q6UX39	209 aa		11.29	□□□□□ -0.6
MRPL55-215	ENST00000366742		Q8NAQ8	132 aa		11.29	□□□□□ -0.6
MRPL55-215	ENST00000366742	OR4B1	Q8NGF8	309 aa		11.29	□□□□□ -0.6
MRPL55-215	ENST00000366742	C1QTNF4	Q9BXJ3	329 aa		11.29	□□□□□ -0.6
MRPL55-215	ENST00000366742	C11orf68	Q9H3H3	251 aa	Known RBP	11.29	□□□□□ -0.6
MRPL55-215	ENST00000366742	HRH4	Q9H3N8	390 aa		11.29	□□□□□ -0.6
MRPL55-215	ENST00000366742	WFDC1	Q9HC57	220 aa		11.29	□□□□□ -0.6
MRPL55-215	ENST00000366742	ZNF331	Q9NQX6	463 aa	Predicted RBP	11.29	□□□□□ -0.6
MRPL55-215	ENST00000366742	XCL2	Q9UBD3	114 aa		11.29	□□□□□ -0.6
MRPL55-215	ENST00000366742		X6R8D5	127 aa		11.29	□□□□□ -0.6
MRPL55-215	ENST00000366742	TENM2	Q9NT68	2774 aa		11.28	□□□□□ -0.6
MRPL55-215	ENST00000366742	GIP	P09681	153 aa	Predicted RBP	11.28	□□□□□ -0.6
MRPL55-215	ENST00000366742	FXYD7	P58549	80 aa		11.28	□□□□□ -0.6
MRPL55-215	ENST00000366742	PSG9	Q00887	426 aa		11.28	□□□□□ -0.6
MRPL55-215	ENST00000366742	PSG3	Q16557	428 aa		11.28	□□□□□ -0.6
MRPL55-215	ENST00000366742		Q5BKY6	102 aa		11.28	□□□□□ -0.6
MRPL55-215	ENST00000366742	LCN15	Q6UWW0	184 aa		11.28	□□□□□ -0.6
MRPL55-215	ENST00000366742	SAT2	Q96F10	170 aa	Predicted RBP	11.28	□□□□□ -0.6
MRPL55-215	ENST00000366742	SMIM3	Q9BZL3	60 aa		11.28	□□□□□ -0.6
MRPL55-215	ENST00000366742	SLC35B3	Q9H1N7	401 aa		11.28	□□□□□ -0.6
MRPL55-215	ENST00000366742		H3BTX0	84 aa		11.27	□□□□□ -0.61
MRPL55-215	ENST00000366742	SLC17A3	O00476	420 aa		11.27	□□□□□ -0.61
MRPL55-215	ENST00000366742	RBMY1A1	P0DJD3	496 aa	Known RBP	11.27	□□□□□ -0.61
MRPL55-215	ENST00000366742	RBMY1C	P0DJD4	496 aa		11.27	□□□□□ -0.61
MRPL55-215	ENST00000366742	CNN1	P51911	297 aa	Known RBP	11.27	□□□□□ -0.61
MRPL55-215	ENST00000366742	RBMY1F	Q15415	496 aa	Known RBP	11.27	□□□□□ -0.61
MRPL55-215	ENST00000366742	ZNF738	Q8NE65	137 aa		11.27	□□□□□ -0.61
MRPL55-215	ENST00000366742	ASB13	Q8WXK3	278 aa		11.27	□□□□□ -0.61
MRPL55-215	ENST00000366742	TMEM14C	Q9P0S9	112 aa		11.27	□□□□□ -0.61
MRPL55-215	ENST00000366742	PLEC	Q15149	4684 aa	Known RBP	11.27	□□□□□ -0.61
MRPL55-215	ENST00000366742	RYR3	Q15413	4870 aa		11.26	□□□□□ -0.61
MRPL55-215	ENST00000366742	IGHV4-28	A0A0C4DH34	117 aa		11.26	□□□□□ -0.61
MRPL55-215	ENST00000366742	DEFB4A	O15263	64 aa		11.26	□□□□□ -0.61
MRPL55-215	ENST00000366742	DUSP14	O95147	198 aa	Known RBP	11.26	□□□□□ -0.61
MRPL55-215	ENST00000366742	ZNF705D	P0CH99	300 aa	Predicted RBP	11.26	□□□□□ -0.61
MRPL55-215	ENST00000366742	ZNF705B	P0CI00	300 aa	Predicted RBP	11.26	□□□□□ -0.61
MRPL55-215	ENST00000366742	MIF	P14174	115 aa		11.26	□□□□□ -0.61
MRPL55-215	ENST00000366742	ZNF705A	Q6ZN79	300 aa	Predicted RBP	11.26	□□□□□ -0.61
MRPL55-215	ENST00000366742	LRRC20	Q8TCA0	184 aa		11.26	□□□□□ -0.61
MRPL55-215	ENST00000366742	FAM167A-AS1	Q96KT0	104 aa		11.26	□□□□□ -0.61
MRPL55-215	ENST00000366742	SLC50A1	Q9BRV3	221 aa		11.26	□□□□□ -0.61
MRPL55-215	ENST00000366742	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.26	□□□□□ -0.61
MRPL55-215	ENST00000366742	KCNIP2	Q9NS61	270 aa		11.26	□□□□□ -0.61
MRPL55-215	ENST00000366742	ZNF586	Q9NXT0	402 aa		11.26	□□□□□ -0.61
MRPL55-215	ENST00000366742	C17orf112	F2Z3M2	114 aa		11.25	□□□□□ -0.61
MRPL55-215	ENST00000366742	IFNA5	P01569	189 aa		11.25	□□□□□ -0.61
MRPL55-215	ENST00000366742	MIR17HG	Q75NE6	70 aa		11.25	□□□□□ -0.61
MRPL55-215	ENST00000366742	OR8A1	Q8NGG7	326 aa		11.25	□□□□□ -0.61
MRPL55-215	ENST00000366742	RPUSD4	Q96CM3	377 aa	Known RBP	11.25	□□□□□ -0.61
MRPL55-215	ENST00000366742	AQP10	Q96PS8	301 aa		11.25	□□□□□ -0.61
MRPL55-215	ENST00000366742	SLC25A2	Q9BXI2	301 aa		11.25	□□□□□ -0.61
MRPL55-215	ENST00000366742	MFF	Q9GZY8	342 aa		11.25	□□□□□ -0.61
MRPL55-215	ENST00000366742	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.24	□□□□□ -0.61
MRPL55-215	ENST00000366742	ZNF253	O75346	499 aa		11.24	□□□□□ -0.61
MRPL55-215	ENST00000366742	PRB4	P10163	310 aa	Predicted RBP	11.24	□□□□□ -0.61
MRPL55-215	ENST00000366742	GUK1	Q16774	197 aa		11.24	□□□□□ -0.61
MRPL55-215	ENST00000366742	SCGB1C1	Q8TD33	95 aa		11.24	□□□□□ -0.61
MRPL55-215	ENST00000366742	RFNG	Q9Y644	331 aa		11.24	□□□□□ -0.61
MRPL55-215	ENST00000366742	DNAH1	Q9P2D7	4330 aa		11.24	□□□□□ -0.61
MRPL55-215	ENST00000366742	TRBV19	A0A075B6N1	114 aa		11.23	□□□□□ -0.61
MRPL55-215	ENST00000366742	PRAC2	D3DTV9	90 aa		11.23	□□□□□ -0.61
MRPL55-215	ENST00000366742		G3V3Q6	166 aa		11.23	□□□□□ -0.61
MRPL55-215	ENST00000366742	NDUFB4	O95168	129 aa		11.23	□□□□□ -0.61
MRPL55-215	ENST00000366742	PYY	P10082	97 aa		11.23	□□□□□ -0.61
MRPL55-215	ENST00000366742	HIST1H1E	P10412	219 aa	Known RBP	11.23	□□□□□ -0.61
MRPL55-215	ENST00000366742	HIST1H1A	Q02539	215 aa	Predicted RBP	11.23	□□□□□ -0.61
MRPL55-215	ENST00000366742	PMS2P11	Q13670	270 aa		11.23	□□□□□ -0.61
MRPL55-215	ENST00000366742	FFAR4	Q5NUL3	377 aa		11.23	□□□□□ -0.61
MRPL55-215	ENST00000366742	C1orf158	Q8N1D5	194 aa		11.23	□□□□□ -0.61
MRPL55-215	ENST00000366742	NEU1	Q99519	415 aa		11.23	□□□□□ -0.61
MRPL55-215	ENST00000366742	MRPL32	Q9BYC8	188 aa	Known RBP	11.23	□□□□□ -0.61
MRPL55-215	ENST00000366742	CXorf65	A6NEN9	183 aa		11.22	□□□□□ -0.61
MRPL55-215	ENST00000366742	CRX	O43186	299 aa	Predicted RBP	11.22	□□□□□ -0.61
MRPL55-215	ENST00000366742	NANOS2	P60321	138 aa	Known RBP	11.22	□□□□□ -0.61
MRPL55-215	ENST00000366742	C11orf45	Q8TAV5	145 aa		11.22	□□□□□ -0.61
MRPL55-215	ENST00000366742	LYST	Q99698	3801 aa		11.22	□□□□□ -0.61
MRPL55-215	ENST00000366742	FUT9	Q9Y231	359 aa		11.22	□□□□□ -0.61
MRPL55-215	ENST00000366742		M0R2Z0	102 aa		11.21	□□□□□ -0.61
MRPL55-215	ENST00000366742	AMBP	P02760	352 aa		11.21	□□□□□ -0.61
MRPL55-215	ENST00000366742	PDE6H	Q13956	83 aa		11.21	□□□□□ -0.61
MRPL55-215	ENST00000366742	SPINK13	Q1W4C9	94 aa		11.21	□□□□□ -0.61
MRPL55-215	ENST00000366742	OR2T35	Q8NGX2	323 aa		11.21	□□□□□ -0.61
MRPL55-215	ENST00000366742	ZNF503	Q96F45	646 aa		11.21	□□□□□ -0.61
MRPL55-215	ENST00000366742	IGF2BP2-AS1	Q96M15	143 aa		11.21	□□□□□ -0.61
MRPL55-215	ENST00000366742	RYR2	Q92736	4967 aa		11.2	□□□□□ -0.62
MRPL55-215	ENST00000366742	RNF222	A6NCQ9	220 aa		11.2	□□□□□ -0.62
MRPL55-215	ENST00000366742	SMIM9	A6NGZ8	99 aa		11.2	□□□□□ -0.62
MRPL55-215	ENST00000366742	BOLA2-SMG1P6	H3BVE0	249 aa		11.2	□□□□□ -0.62
MRPL55-215	ENST00000366742	CEMP1	Q6PRD7	247 aa	Predicted RBP	11.2	□□□□□ -0.62
MRPL55-215	ENST00000366742	FXYD5	Q96DB9	178 aa		11.2	□□□□□ -0.62
MRPL55-215	ENST00000366742	OR51M1	Q9H341	326 aa		11.2	□□□□□ -0.62
MRPL55-215	ENST00000366742	TNFSF18	Q9UNG2	199 aa		11.2	□□□□□ -0.62
MRPL55-215	ENST00000366742	GOLT1B	Q9Y3E0	138 aa		11.2	□□□□□ -0.62
MRPL55-215	ENST00000366742	TIMM9	Q9Y5J7	89 aa		11.2	□□□□□ -0.62

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