RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 IGHV1-69P01742 117 aa3.52□□□□□ -1.85
PTPN22-201ENST00000359785 IGKCP01834 107 aa3.52□□□□□ -1.85
PTPN22-201ENST00000359785 FXYD2P54710 66 aa3.52□□□□□ -1.85
PTPN22-201ENST00000359785 TNFAIP6P98066 277 aaPredicted RBP3.52□□□□□ -1.85
PTPN22-201ENST00000359785 PLP2Q04941 152 aa3.52□□□□□ -1.85
PTPN22-201ENST00000359785 BAALCQ8WXS3 180 aa3.52□□□□□ -1.85
PTPN22-201ENST00000359785 GAFA1Q96PS6 74 aa3.52□□□□□ -1.85
PTPN22-201ENST00000359785 PRORYQ9H606 182 aa3.52□□□□□ -1.85
PTPN22-201ENST00000359785 FNDC4Q9H6D8 234 aaPredicted RBP3.52□□□□□ -1.85
PTPN22-201ENST00000359785 TSSC4Q9Y5U2 329 aaPredicted RBP3.52□□□□□ -1.85
PTPN22-201ENST00000359785 F11RQ9Y624 299 aaKnown RBP3.52□□□□□ -1.85
PTPN22-201ENST00000359785 U3KQE9 123 aa3.52□□□□□ -1.85
PTPN22-201ENST00000359785 CACNA1GO43497 2377 aa3.52□□□□□ -1.85
PTPN22-201ENST00000359785 A0A1W2PQM1 296 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 MRPL33O75394 65 aaKnown RBP3.51□□□□□ -1.85
PTPN22-201ENST00000359785 CRLF1O75462 422 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 ARL4DP49703 201 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 MRPL51Q4U2R6 128 aaKnown RBP3.51□□□□□ -1.85
PTPN22-201ENST00000359785 GAGE13Q4V321 117 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 MORN5Q5VZ52 161 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 SSMEM1Q8WWF3 244 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 NPIPB3Q92617 1050 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 ZC2HC1AQ96GY0 325 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 ODF3Q96PU9 254 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 SPXQ9BT56 116 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 Q9H3A6 140 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 GEMIN7Q9H840 131 aaKnown RBP3.51□□□□□ -1.85
PTPN22-201ENST00000359785 B4GALT7Q9UBV7 327 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 K7ENP7 123 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 ZNF688P0C7X2 276 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 ERCC8Q13216 396 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 FAM222AQ5U5X8 452 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 C6orf15Q6UXA7 325 aaPredicted RBP3.51□□□□□ -1.85
PTPN22-201ENST00000359785 NRGNQ92686 78 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 RASL10AQ92737 203 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 C17orf77Q96MU5 243 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 FAM103A1Q9BTL3 118 aaKnown RBP3.51□□□□□ -1.85
PTPN22-201ENST00000359785 TRAV3A0A0B4J244 114 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 MYMXA0A1B0GTQ4 84 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 F8VRH5 84 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 H3BUT2 72 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 NPYP01303 97 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 PRDX2P32119 198 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 PLGLAQ15195 96 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 LTC4SQ16873 150 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 ZFAND6Q6FIF0 208 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 IGFL3Q6UXB1 125 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 ASCL5Q7RTU5 278 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 MDP1Q86V88 176 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 TUSC5Q8IXB3 177 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 AJUBAQ96IF1 538 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 OBSCN-AS1Q96MR7 158 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 TIMM17AQ99595 171 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 SLC50A1Q9BRV3 221 aa3.51□□□□□ -1.85
PTPN22-201ENST00000359785 ERHP84090 104 aaKnown RBP3.5□□□□□ -1.85
PTPN22-201ENST00000359785 KLF14Q8TD94 323 aaPredicted RBP3.5□□□□□ -1.85
PTPN22-201ENST00000359785 ALPK2Q86TB3 2170 aa3.5□□□□□ -1.85
PTPN22-201ENST00000359785 TRAV26-1A0A087WT03 109 aa3.5□□□□□ -1.85
PTPN22-201ENST00000359785 MBD3L4A6NDZ8 208 aaPredicted RBP3.5□□□□□ -1.85
PTPN22-201ENST00000359785 MBD3L3A6NE82 208 aaPredicted RBP3.5□□□□□ -1.85
PTPN22-201ENST00000359785 MBD3L5A6NJ08 208 aaPredicted RBP3.5□□□□□ -1.85
PTPN22-201ENST00000359785 C3orf80F5H4A9 247 aa3.5□□□□□ -1.85
PTPN22-201ENST00000359785 TIMM23O14925 209 aa3.5□□□□□ -1.85
PTPN22-201ENST00000359785 SAA1P0DJI8 122 aaPredicted RBP3.5□□□□□ -1.85
PTPN22-201ENST00000359785 RPS16P62249 146 aaKnown RBP3.5□□□□□ -1.85
PTPN22-201ENST00000359785 WT1-ASQ06250 92 aa3.5□□□□□ -1.85
PTPN22-201ENST00000359785 HES1Q14469 280 aa3.5□□□□□ -1.85
PTPN22-201ENST00000359785 C19orf54Q5BKX5 351 aa3.5□□□□□ -1.85
PTPN22-201ENST00000359785 C5orf38Q86SI9 138 aa3.5□□□□□ -1.85
PTPN22-201ENST00000359785 MBD3L2Q8NHZ7 208 aaPredicted RBP3.5□□□□□ -1.85
PTPN22-201ENST00000359785 DNAJC30Q96LL9 226 aa3.5□□□□□ -1.85
PTPN22-201ENST00000359785 MED12LQ86YW9 2145 aa3.5□□□□□ -1.85
PTPN22-201ENST00000359785 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.5□□□□□ -1.85
PTPN22-201ENST00000359785 NDUFC2-KCTD14E9PQ53 114 aa3.5□□□□□ -1.85
PTPN22-201ENST00000359785 CXCL13O43927 109 aa3.5□□□□□ -1.85
PTPN22-201ENST00000359785 FXYD3Q14802 87 aa3.5□□□□□ -1.85
PTPN22-201ENST00000359785 C9orf47Q6ZRZ4 202 aa3.5□□□□□ -1.85
PTPN22-201ENST00000359785 Q8N6K4 173 aa3.5□□□□□ -1.85
PTPN22-201ENST00000359785 TMEM141Q96I45 108 aa3.5□□□□□ -1.85
PTPN22-201ENST00000359785 LINC01587Q99440 93 aa3.5□□□□□ -1.85
PTPN22-201ENST00000359785 SCNM1Q9BWG6 230 aa3.5□□□□□ -1.85
PTPN22-201ENST00000359785 MRPL20Q9BYC9 149 aaKnown RBP3.5□□□□□ -1.85
PTPN22-201ENST00000359785 ZFAND3Q9H8U3 227 aa3.5□□□□□ -1.85
PTPN22-201ENST00000359785 ENY2Q9NPA8 101 aa3.5□□□□□ -1.85
PTPN22-201ENST00000359785 A8MTW9 85 aa3.49□□□□□ -1.85
PTPN22-201ENST00000359785 OOSP1A8MZH6 123 aa3.49□□□□□ -1.85
PTPN22-201ENST00000359785 H7C1H1 209 aa3.49□□□□□ -1.85
PTPN22-201ENST00000359785 CDX4O14627 284 aaPredicted RBP3.49□□□□□ -1.85
PTPN22-201ENST00000359785 RBMXL2O75526 392 aaKnown RBP3.49□□□□□ -1.85
PTPN22-201ENST00000359785 ACTL6BO94805 426 aa3.49□□□□□ -1.85
PTPN22-201ENST00000359785 LGALS1P09382 135 aaKnown RBP3.49□□□□□ -1.85
PTPN22-201ENST00000359785 OTX2P32243 289 aa3.49□□□□□ -1.85
PTPN22-201ENST00000359785 FOLR3P41439 243 aa3.49□□□□□ -1.85
PTPN22-201ENST00000359785 TMEM170BQ5T4T1 132 aa3.49□□□□□ -1.85
PTPN22-201ENST00000359785 DUX4L9Q6RFH8 374 aaPredicted RBP3.49□□□□□ -1.85
PTPN22-201ENST00000359785 SLC25A29Q8N8R3 303 aa3.49□□□□□ -1.85
PTPN22-201ENST00000359785 MAP1LC3AQ9H492 121 aa3.49□□□□□ -1.85
PTPN22-201ENST00000359785 ZNF256Q9Y2P7 627 aaPredicted RBP3.49□□□□□ -1.85
PTPN22-201ENST00000359785 SLC25A15Q9Y619 301 aa3.49□□□□□ -1.85
PTPN22-201ENST00000359785 IGHV1-3A0A0C4DH29 117 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms