RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 CLEC19AQ6UXS0 136 aa13.8□□□□□ -0.2
NPAS3-202ENST00000356141 F8W735 103 aaPredicted RBP13.79□□□□□ -0.2
NPAS3-202ENST00000356141 AMY1AP04745 511 aa13.79□□□□□ -0.2
NPAS3-202ENST00000356141 ZNF329Q86UD4 541 aa13.79□□□□□ -0.2
NPAS3-202ENST00000356141 PIFOQ8TCI5 191 aa13.79□□□□□ -0.2
NPAS3-202ENST00000356141 MRPL32Q9BYC8 188 aaKnown RBP13.79□□□□□ -0.2
NPAS3-202ENST00000356141 IGHV3-11P01762 117 aa13.79□□□□□ -0.2
NPAS3-202ENST00000356141 IL17RELQ6ZVW7 336 aa13.79□□□□□ -0.2
NPAS3-202ENST00000356141 RNF125Q96EQ8 232 aa13.79□□□□□ -0.2
NPAS3-202ENST00000356141 PPP5D1E7EU14 171 aa13.78□□□□□ -0.2
NPAS3-202ENST00000356141 GGCTO75223 188 aaKnown RBP13.78□□□□□ -0.2
NPAS3-202ENST00000356141 CLEC3BP05452 202 aa13.78□□□□□ -0.2
NPAS3-202ENST00000356141 PTTG1IPP53801 180 aa13.78□□□□□ -0.2
NPAS3-202ENST00000356141 C20orf202A1L168 122 aa13.78□□□□□ -0.2
NPAS3-202ENST00000356141 PFN1P07737 140 aaKnown RBP13.78□□□□□ -0.2
NPAS3-202ENST00000356141 ZNF491Q8N8L2 437 aa13.78□□□□□ -0.2
NPAS3-202ENST00000356141 ZNF586Q9NXT0 402 aa13.78□□□□□ -0.2
NPAS3-202ENST00000356141 C1RLQ9NZP8 487 aa13.78□□□□□ -0.2
NPAS3-202ENST00000356141 A0A1B0GUS0 222 aa13.77□□□□□ -0.2
NPAS3-202ENST00000356141 M0R3E3 92 aa13.77□□□□□ -0.2
NPAS3-202ENST00000356141 OR1L6Q8NGR2 347 aa13.77□□□□□ -0.2
NPAS3-202ENST00000356141 IMMP2LQ96T52 175 aa13.77□□□□□ -0.2
NPAS3-202ENST00000356141 MFAP4P55083 255 aa13.77□□□□□ -0.21
NPAS3-202ENST00000356141 C5orf56Q8N8D9 126 aa13.77□□□□□ -0.21
NPAS3-202ENST00000356141 OR10G8Q8NGN5 311 aa13.77□□□□□ -0.21
NPAS3-202ENST00000356141 Q9H3A6 140 aa13.77□□□□□ -0.21
NPAS3-202ENST00000356141 GP9P14770 177 aa13.77□□□□□ -0.21
NPAS3-202ENST00000356141 ANAPC16Q96DE5 110 aa13.77□□□□□ -0.21
NPAS3-202ENST00000356141 SMAD7O15105 426 aaKnown RBP13.76□□□□□ -0.21
NPAS3-202ENST00000356141 SCGB1D1O95968 90 aa13.76□□□□□ -0.21
NPAS3-202ENST00000356141 EBI3Q14213 229 aa13.76□□□□□ -0.21
NPAS3-202ENST00000356141 TMEM249Q2WGJ8 235 aa13.76□□□□□ -0.21
NPAS3-202ENST00000356141 CITED1Q99966 193 aa13.76□□□□□ -0.21
NPAS3-202ENST00000356141 PEX7O00628 323 aa13.76□□□□□ -0.21
NPAS3-202ENST00000356141 ADMP35318 185 aa13.76□□□□□ -0.21
NPAS3-202ENST00000356141 TTC9CQ8N5M4 171 aa13.76□□□□□ -0.21
NPAS3-202ENST00000356141 OOSP1A8MZH6 123 aa13.75□□□□□ -0.21
NPAS3-202ENST00000356141 PVRIGQ6DKI7 326 aa13.75□□□□□ -0.21
NPAS3-202ENST00000356141 C19orf24Q9BVV8 132 aa13.75□□□□□ -0.21
NPAS3-202ENST00000356141 PITPNC1Q9UKF7 332 aa13.75□□□□□ -0.21
NPAS3-202ENST00000356141 HLA-DMBP28068 263 aa13.75□□□□□ -0.21
NPAS3-202ENST00000356141 OR8I2Q8N0Y5 310 aa13.75□□□□□ -0.21
NPAS3-202ENST00000356141 A0A1W2PRE2 83 aa13.74□□□□□ -0.21
NPAS3-202ENST00000356141 B4DSR2 109 aa13.74□□□□□ -0.21
NPAS3-202ENST00000356141 IGHV4-59P01825 116 aa13.74□□□□□ -0.21
NPAS3-202ENST00000356141 HLA-DRB1P01911 266 aa13.74□□□□□ -0.21
NPAS3-202ENST00000356141 C10orf99Q6UWK7 81 aa13.74□□□□□ -0.21
NPAS3-202ENST00000356141 GOLT1AQ6ZVE7 132 aa13.74□□□□□ -0.21
NPAS3-202ENST00000356141 BAGE2Q86Y30 109 aa13.74□□□□□ -0.21
NPAS3-202ENST00000356141 NPIPB5A8MRT5 1133 aa13.74□□□□□ -0.21
NPAS3-202ENST00000356141 TRBV12-3P01733 135 aa13.74□□□□□ -0.21
NPAS3-202ENST00000356141 CTSGP08311 255 aa13.74□□□□□ -0.21
NPAS3-202ENST00000356141 TMEM183AQ8IXX5 376 aa13.74□□□□□ -0.21
NPAS3-202ENST00000356141 ZNF479Q96JC4 524 aa13.74□□□□□ -0.21
NPAS3-202ENST00000356141 CTDSP1Q9GZU7 261 aa13.74□□□□□ -0.21
NPAS3-202ENST00000356141 CSTL1Q9H114 145 aa13.74□□□□□ -0.21
NPAS3-202ENST00000356141 IGKV3-7A0A075B6H7 116 aa13.73□□□□□ -0.21
NPAS3-202ENST00000356141 CCL25O15444 150 aa13.73□□□□□ -0.21
NPAS3-202ENST00000356141 UBE2G1P62253 170 aa13.73□□□□□ -0.21
NPAS3-202ENST00000356141 GCGP01275 180 aa13.73□□□□□ -0.21
NPAS3-202ENST00000356141 CBLN1P23435 193 aa13.73□□□□□ -0.21
NPAS3-202ENST00000356141 CNN1P51911 297 aaKnown RBP13.73□□□□□ -0.21
NPAS3-202ENST00000356141 DEFB112Q30KQ8 113 aa13.73□□□□□ -0.21
NPAS3-202ENST00000356141 MRPL54Q6P161 138 aaKnown RBP13.73□□□□□ -0.21
NPAS3-202ENST00000356141 Q96MF0 132 aa13.73□□□□□ -0.21
NPAS3-202ENST00000356141 KLK15Q9H2R5 256 aa13.73□□□□□ -0.21
NPAS3-202ENST00000356141 IGLV2-8P01709 118 aa13.72□□□□□ -0.21
NPAS3-202ENST00000356141 PRNTQ86SH4 94 aa13.72□□□□□ -0.21
NPAS3-202ENST00000356141 C11orf52Q96A22 123 aa13.72□□□□□ -0.21
NPAS3-202ENST00000356141 RNF2Q99496 336 aa13.72□□□□□ -0.21
NPAS3-202ENST00000356141 M0QZ24 198 aa13.72□□□□□ -0.21
NPAS3-202ENST00000356141 APOHP02749 345 aaPredicted RBP13.72□□□□□ -0.21
NPAS3-202ENST00000356141 THYN1Q9P016 225 aa13.72□□□□□ -0.21
NPAS3-202ENST00000356141 EPDR1Q9UM22 224 aa13.72□□□□□ -0.21
NPAS3-202ENST00000356141 ZFP30Q9Y2G7 519 aa13.72□□□□□ -0.21
NPAS3-202ENST00000356141 UNC79Q9P2D8 2635 aa13.72□□□□□ -0.21
NPAS3-202ENST00000356141 IQCJQ1A5X6 159 aa13.72□□□□□ -0.21
NPAS3-202ENST00000356141 MRPL27Q9P0M9 148 aaKnown RBP13.72□□□□□ -0.21
NPAS3-202ENST00000356141 MOB4Q9Y3A3 225 aa13.72□□□□□ -0.21
NPAS3-202ENST00000356141 IBA57Q5T440 356 aaKnown RBP13.71□□□□□ -0.21
NPAS3-202ENST00000356141 LINC00322Q6ZN03 302 aaPredicted RBP13.71□□□□□ -0.21
NPAS3-202ENST00000356141 CIARTQ8N365 385 aaPredicted RBP13.71□□□□□ -0.21
NPAS3-202ENST00000356141 TMEM242Q9NWH2 141 aa13.71□□□□□ -0.21
NPAS3-202ENST00000356141 TOMM40O96008 361 aa13.71□□□□□ -0.22
NPAS3-202ENST00000356141 KIAA1644Q3SXP7 199 aa13.71□□□□□ -0.22
NPAS3-202ENST00000356141 CCDC140Q96MF4 163 aa13.71□□□□□ -0.22
NPAS3-202ENST00000356141 ALKBH7Q9BT30 221 aaPredicted RBP13.71□□□□□ -0.22
NPAS3-202ENST00000356141 TRAV41A0A0B4J266 112 aa13.7□□□□□ -0.22
NPAS3-202ENST00000356141 GRIFINA4D1Z8 144 aa13.7□□□□□ -0.22
NPAS3-202ENST00000356141 TRGV3P03979 118 aa13.7□□□□□ -0.22
NPAS3-202ENST00000356141 KCNIP4Q6PIL6 250 aa13.7□□□□□ -0.22
NPAS3-202ENST00000356141 IGF2BP2-AS1Q96M15 143 aa13.7□□□□□ -0.22
NPAS3-202ENST00000356141 ZNF705FA8MVS1 300 aaPredicted RBP13.7□□□□□ -0.22
NPAS3-202ENST00000356141 ZNF705DP0CH99 300 aaPredicted RBP13.7□□□□□ -0.22
NPAS3-202ENST00000356141 ZNF705BP0CI00 300 aaPredicted RBP13.7□□□□□ -0.22
NPAS3-202ENST00000356141 IER3P46695 156 aa13.7□□□□□ -0.22
NPAS3-202ENST00000356141 TPPP2P59282 170 aa13.7□□□□□ -0.22
NPAS3-202ENST00000356141 CMTM2Q8TAZ6 248 aa13.7□□□□□ -0.22
NPAS3-202ENST00000356141 TXNDC17Q9BRA2 123 aa13.7□□□□□ -0.22
NPAS3-202ENST00000356141 NIPBLQ6KC79 2804 aaeCLIP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms