RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 RPL7L1Q6DKI1 246 aaKnown RBP0.98□□□□□ -2.25
BRCA1-202ENST00000354071 ANGPTL5Q86XS5 388 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 C12orf29Q8N999 325 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 OR4K15Q8NH41 348 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 UBALD1Q8TB05 177 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 OR51I2Q9H344 312 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 TAF9BQ9HBM6 251 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 MED9Q9NWA0 146 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 DOK5Q9P104 306 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 VPS29Q9UBQ0 182 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 SLC23A2Q9UGH3 650 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 ICOSQ9Y6W8 199 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 MGAMO43451 1857 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 PTPRJQ12913 1337 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 SEC16AO15027 2179 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 KIAA1671Q9BY89 1806 aa0.98□□□□□ -2.25
BRCA1-202ENST00000354071 TRIP11Q15643 1979 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 A0A1B0GV90 55 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 A0A1B0GVY2 172 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 C19orf71A6NCJ1 209 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 A6NIN4 97 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 C17orf112F2Z3M2 114 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 H3BVH4 76 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 GPR31O00270 319 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 TP53I11O14683 189 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 PIRTP0C851 137 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 OR10J1P30954 320 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 OR1E2P47887 323 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 SRP9P49458 86 aaKnown RBP0.97□□□□□ -2.25
BRCA1-202ENST00000354071 KLF3P57682 345 aaPredicted RBP0.97□□□□□ -2.25
BRCA1-202ENST00000354071 FXYD4P59646 89 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 PAFAH1B3Q15102 231 aaKnown RBP0.97□□□□□ -2.25
BRCA1-202ENST00000354071 HIST3H3Q16695 136 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 CLLU1Q5K131 121 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 FAM201AQ5SY85 155 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 LDLRAD2Q5SZI1 272 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 SAMD13Q5VXD3 122 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 PRSS54Q6PEW0 395 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 SCGB1D4Q6XE38 83 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 GRINAQ7Z429 371 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 PHF13Q86YI8 300 aaPredicted RBP0.97□□□□□ -2.25
BRCA1-202ENST00000354071 BAP18Q8IXM2 172 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 EIF4E3Q8N5X7 224 aaKnown RBP0.97□□□□□ -2.25
BRCA1-202ENST00000354071 OR13D1Q8NGV5 346 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 CIB3Q96Q77 187 aaPredicted RBP0.97□□□□□ -2.25
BRCA1-202ENST00000354071 LYSMD1Q96S90 227 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 SIGMAR1Q99720 223 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 CMSS1Q9BQ75 279 aaKnown RBP0.97□□□□□ -2.25
BRCA1-202ENST00000354071 DOHHQ9BU89 302 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 SNRNP25Q9BV90 132 aaKnown RBP0.97□□□□□ -2.25
BRCA1-202ENST00000354071 TTTY10Q9BZA0 68 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 OR2J1Q9GZK6 312 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 ABRACLQ9P1F3 81 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 SS18L2Q9UHA2 77 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 WASHC3Q9Y3C0 194 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 TRAPPC1Q9Y5R8 145 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 CNTRLQ7Z7A1 2325 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 IGKV6D-41A0A0C4DH26 115 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 C9JQL5 133 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 POP7O75817 140 aaKnown RBP0.97□□□□□ -2.25
BRCA1-202ENST00000354071 CDS2O95674 445 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 HAND1O96004 215 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 SLC25A6P12236 298 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 CRHBPP24387 322 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 CRABP1P29762 137 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 G6PCP35575 357 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 AKR1C3P42330 323 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 SULT1A1P50225 295 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 TMEM33P57088 247 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 ARF6P62330 175 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 EMX2Q04743 252 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 EBI3Q14213 229 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 TMEM97Q5BJF2 176 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 NCMAPQ5T1S8 102 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 KPRPQ5T749 579 aaPredicted RBP0.97□□□□□ -2.25
BRCA1-202ENST00000354071 LPCAT3Q6P1A2 487 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 FAM24BQ8N5W8 94 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 OR8J3Q8NGG0 315 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 OR51T1Q8NGJ9 327 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 OR5AK2Q8NH90 309 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 CMBLQ96DG6 245 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 SFRP2Q96HF1 295 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 ABHD14BQ96IU4 210 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 IP6K3Q96PC2 410 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 FKBP11Q9NYL4 201 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 IDI2-AS1Q9NZ38 188 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 MRPL27Q9P0M9 148 aaKnown RBP0.97□□□□□ -2.25
BRCA1-202ENST00000354071 OTOFQ9HC10 1997 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 NLRC5Q86WI3 1866 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 FLNAP21333 2647 aaKnown RBP0.97□□□□□ -2.25
BRCA1-202ENST00000354071 CEP295Q9C0D2 2601 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 MUC22E2RYF6 1773 aaPredicted RBP0.97□□□□□ -2.25
BRCA1-202ENST00000354071 MED13LQ71F56 2210 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 IGKV1D-37A0A075B6S9 117 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 FAM24AA6NFZ4 105 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 LOC730098B7Z3J9 87 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 TECPR2O15040 1411 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 DEGS1O15121 323 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 UBL3O95164 117 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 IGHMP01871 453 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms