RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 LYPD1Q8N2G4 141 aa16.21■□□□□ 0.19
VRK2-201ENST00000340157 ATG101Q9BSB4 218 aa16.21■□□□□ 0.19
VRK2-201ENST00000340157 LY96Q9Y6Y9 160 aa16.21■□□□□ 0.19
VRK2-201ENST00000340157 NSD1Q96L73 2696 aaPredicted RBP16.21■□□□□ 0.18
VRK2-201ENST00000340157 LGALS1P09382 135 aaKnown RBP16.2■□□□□ 0.18
VRK2-201ENST00000340157 GNG4P50150 75 aa16.2■□□□□ 0.18
VRK2-201ENST00000340157 CNN1P51911 297 aaKnown RBP16.2■□□□□ 0.18
VRK2-201ENST00000340157 UBE2E2Q96LR5 201 aa16.2■□□□□ 0.18
VRK2-201ENST00000340157 TMEM242Q9NWH2 141 aa16.2■□□□□ 0.18
VRK2-201ENST00000340157 KLF12Q9Y4X4 402 aa16.2■□□□□ 0.18
VRK2-201ENST00000340157 PRB4P10163 310 aaPredicted RBP16.2■□□□□ 0.18
VRK2-201ENST00000340157 HILS1P60008 231 aa16.2■□□□□ 0.18
VRK2-201ENST00000340157 TMEM183BQ1AE95 376 aa16.2■□□□□ 0.18
VRK2-201ENST00000340157 A0A087X0K7 114 aa16.19■□□□□ 0.18
VRK2-201ENST00000340157 M0R3E3 92 aa16.19■□□□□ 0.18
VRK2-201ENST00000340157 TAS2R60P59551 318 aa16.19■□□□□ 0.18
VRK2-201ENST00000340157 C18orf65Q6ZTR6 163 aa16.19■□□□□ 0.18
VRK2-201ENST00000340157 WIPF2Q8TF74 440 aaPredicted RBP16.19■□□□□ 0.18
VRK2-201ENST00000340157 SGK494Q96LW2 274 aa16.19■□□□□ 0.18
VRK2-201ENST00000340157 ZNF320A2RRD8 509 aa16.18■□□□□ 0.18
VRK2-201ENST00000340157 MT-ND4LP03901 98 aa16.18■□□□□ 0.18
VRK2-201ENST00000340157 ATF4P18848 351 aaPredicted RBP16.18■□□□□ 0.18
VRK2-201ENST00000340157 C16orf54Q6UWD8 224 aa16.18■□□□□ 0.18
VRK2-201ENST00000340157 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.18■□□□□ 0.18
VRK2-201ENST00000340157 FAM24BQ8N5W8 94 aa16.18■□□□□ 0.18
VRK2-201ENST00000340157 C15orf54Q8N8G6 183 aa16.18■□□□□ 0.18
VRK2-201ENST00000340157 GLMPQ8WWB7 406 aa16.18■□□□□ 0.18
VRK2-201ENST00000340157 CTDSP1Q9GZU7 261 aa16.18■□□□□ 0.18
VRK2-201ENST00000340157 EDN2P20800 178 aa16.18■□□□□ 0.18
VRK2-201ENST00000340157 OR5I1Q13606 314 aa16.18■□□□□ 0.18
VRK2-201ENST00000340157 TM4SF20Q53R12 229 aa16.18■□□□□ 0.18
VRK2-201ENST00000340157 GPHB5Q86YW7 130 aa16.18■□□□□ 0.18
VRK2-201ENST00000340157 ZNF418Q8TF45 676 aaPredicted RBP16.18■□□□□ 0.18
VRK2-201ENST00000340157 GPR82Q96P67 336 aa16.18■□□□□ 0.18
VRK2-201ENST00000340157 ZNF253O75346 499 aa16.17■□□□□ 0.18
VRK2-201ENST00000340157 CD99P14209 185 aa16.17■□□□□ 0.18
VRK2-201ENST00000340157 IGFL4Q6B9Z1 124 aa16.17■□□□□ 0.18
VRK2-201ENST00000340157 NHLRC2Q8NBF2 726 aa16.17■□□□□ 0.18
VRK2-201ENST00000340157 IGHV4OR15-8A0A075B7B6 117 aa16.16■□□□□ 0.18
VRK2-201ENST00000340157 A0A087WW49 117 aa16.16■□□□□ 0.18
VRK2-201ENST00000340157 CXorf65A6NEN9 183 aa16.16■□□□□ 0.18
VRK2-201ENST00000340157 INAFM1C9JVW0 142 aa16.16■□□□□ 0.18
VRK2-201ENST00000340157 IGLV2-11P01706 119 aa16.16■□□□□ 0.18
VRK2-201ENST00000340157 GALR1P47211 349 aa16.16■□□□□ 0.18
VRK2-201ENST00000340157 GOLT1AQ6ZVE7 132 aa16.16■□□□□ 0.18
VRK2-201ENST00000340157 CMTM2Q8TAZ6 248 aa16.16■□□□□ 0.18
VRK2-201ENST00000340157 SFRP2Q96HF1 295 aa16.16■□□□□ 0.18
VRK2-201ENST00000340157 ZNF331Q9NQX6 463 aaPredicted RBP16.16■□□□□ 0.18
VRK2-201ENST00000340157 URGCP-MRPS24S4R325 110 aa16.16■□□□□ 0.18
VRK2-201ENST00000340157 TRAV8-1A0A0A6YYK1 113 aa16.16■□□□□ 0.18
VRK2-201ENST00000340157 HLA-DMBP28068 263 aa16.16■□□□□ 0.18
VRK2-201ENST00000340157 PSG9Q00887 426 aa16.16■□□□□ 0.18
VRK2-201ENST00000340157 ELOBQ15370 118 aa16.16■□□□□ 0.18
VRK2-201ENST00000340157 HIST2H2BDQ6DRA6 164 aa16.16■□□□□ 0.18
VRK2-201ENST00000340157 ZNF785A8K8V0 405 aa16.15■□□□□ 0.18
VRK2-201ENST00000340157 GCGP01275 180 aa16.15■□□□□ 0.18
VRK2-201ENST00000340157 ANAPC16Q96DE5 110 aa16.15■□□□□ 0.18
VRK2-201ENST00000340157 DAZ1Q9NQZ3 744 aaKnown RBP16.15■□□□□ 0.18
VRK2-201ENST00000340157 PRELID1Q9Y255 219 aa16.15■□□□□ 0.18
VRK2-201ENST00000340157 FN1P02751 2386 aaKnown RBP16.15■□□□□ 0.18
VRK2-201ENST00000340157 DIRC3C9JPN6 131 aa16.14■□□□□ 0.17
VRK2-201ENST00000340157 H7BYZ3 331 aa16.14■□□□□ 0.17
VRK2-201ENST00000340157 FOSL1P15407 271 aa16.14■□□□□ 0.17
VRK2-201ENST00000340157 RPEL1Q2QD12 228 aa16.14■□□□□ 0.17
VRK2-201ENST00000340157 BAGE2Q86Y30 109 aa16.14■□□□□ 0.17
VRK2-201ENST00000340157 FMC1Q96HJ9 113 aa16.14■□□□□ 0.17
VRK2-201ENST00000340157 AAMDCQ9H7C9 122 aa16.14■□□□□ 0.17
VRK2-201ENST00000340157 IGHV7-4-1A0A0J9YVY3 117 aa16.14■□□□□ 0.17
VRK2-201ENST00000340157 UBE2G1P62253 170 aa16.14■□□□□ 0.17
VRK2-201ENST00000340157 FAM106AQ4KMX7 169 aa16.14■□□□□ 0.17
VRK2-201ENST00000340157 K7EMT4 169 aa16.13■□□□□ 0.17
VRK2-201ENST00000340157 LTAP01374 205 aa16.13■□□□□ 0.17
VRK2-201ENST00000340157 CRYBA1P05813 215 aa16.13■□□□□ 0.17
VRK2-201ENST00000340157 CXCL1P09341 107 aa16.13■□□□□ 0.17
VRK2-201ENST00000340157 CDX1P47902 265 aaPredicted RBP16.13■□□□□ 0.17
VRK2-201ENST00000340157 C16orf95Q9H693 158 aa16.13■□□□□ 0.17
VRK2-201ENST00000340157 TRAV8-2A0A0B4J237 113 aa16.12■□□□□ 0.17
VRK2-201ENST00000340157 DEFB136Q30KP8 78 aa16.12■□□□□ 0.17
VRK2-201ENST00000340157 Q86TA4 180 aa16.12■□□□□ 0.17
VRK2-201ENST00000340157 LINC01006Q8NI28 216 aa16.12■□□□□ 0.17
VRK2-201ENST00000340157 MLST8Q9BVC4 326 aa16.12■□□□□ 0.17
VRK2-201ENST00000340157 TGIF2-C20orf24A0A0A6YYL0 155 aa16.12■□□□□ 0.17
VRK2-201ENST00000340157 PFN1P07737 140 aaKnown RBP16.12■□□□□ 0.17
VRK2-201ENST00000340157 C8orf86Q6ZUL3 223 aa16.12■□□□□ 0.17
VRK2-201ENST00000340157 RHPN1-AS1Q9BWJ2 59 aa16.12■□□□□ 0.17
VRK2-201ENST00000340157 SMPXQ9UHP9 88 aa16.12■□□□□ 0.17
VRK2-201ENST00000340157 SETXQ7Z333 2677 aaKnown RBP16.11■□□□□ 0.17
VRK2-201ENST00000340157 TMEM213A2RRL7 107 aa16.11■□□□□ 0.17
VRK2-201ENST00000340157 CHEK1O14757 476 aa16.11■□□□□ 0.17
VRK2-201ENST00000340157 S100A9P06702 114 aaKnown RBP16.11■□□□□ 0.17
VRK2-201ENST00000340157 MGST1P10620 155 aaKnown RBP16.11■□□□□ 0.17
VRK2-201ENST00000340157 HOXD3P31249 432 aaPredicted RBP16.11■□□□□ 0.17
VRK2-201ENST00000340157 RNF182Q8N6D2 247 aa16.11■□□□□ 0.17
VRK2-201ENST00000340157 TMEM75Q8N9X5 138 aa16.11■□□□□ 0.17
VRK2-201ENST00000340157 OR10G8Q8NGN5 311 aa16.11■□□□□ 0.17
VRK2-201ENST00000340157 RNASE7Q9H1E1 156 aaKnown RBP16.11■□□□□ 0.17
VRK2-201ENST00000340157 SETD2Q9BYW2 2564 aaPredicted RBP16.1■□□□□ 0.17
VRK2-201ENST00000340157 ZNF705FA8MVS1 300 aaPredicted RBP16.1■□□□□ 0.17
VRK2-201ENST00000340157 SELENOKQ9Y6D0 94 aa16.1■□□□□ 0.17
VRK2-201ENST00000340157 BAHCC1Q9P281 2608 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms