RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 C2orf50Q96LR7 162 aa12.63□□□□□ -0.39
HDDC3-201ENST00000330334 TMEM208Q9BTX3 173 aa12.63□□□□□ -0.39
HDDC3-201ENST00000330334 C11orf1Q9H5F2 150 aa12.63□□□□□ -0.39
HDDC3-201ENST00000330334 CCSO14618 274 aa12.62□□□□□ -0.39
HDDC3-201ENST00000330334 INSP01308 110 aa12.62□□□□□ -0.39
HDDC3-201ENST00000330334 IL15RAQ13261 267 aa12.62□□□□□ -0.39
HDDC3-201ENST00000330334 RAB31Q13636 194 aa12.62□□□□□ -0.39
HDDC3-201ENST00000330334 SPINK13Q1W4C9 94 aa12.62□□□□□ -0.39
HDDC3-201ENST00000330334 LRRC20Q8TCA0 184 aa12.62□□□□□ -0.39
HDDC3-201ENST00000330334 MGST2Q99735 147 aa12.62□□□□□ -0.39
HDDC3-201ENST00000330334 C5orf51A6NDU8 294 aa12.61□□□□□ -0.39
HDDC3-201ENST00000330334 FAM25EA8MYX2 175 aa12.61□□□□□ -0.39
HDDC3-201ENST00000330334 BOLA2-SMG1P6H3BVE0 249 aa12.61□□□□□ -0.39
HDDC3-201ENST00000330334 M0R2Z0 102 aa12.61□□□□□ -0.39
HDDC3-201ENST00000330334 H2AFB2P0C5Z0 115 aa12.61□□□□□ -0.39
HDDC3-201ENST00000330334 LCN15Q6UWW0 184 aa12.61□□□□□ -0.39
HDDC3-201ENST00000330334 BPIFA4PQ86YQ2 179 aa12.61□□□□□ -0.39
HDDC3-201ENST00000330334 TMEM37Q8WXS4 190 aa12.61□□□□□ -0.39
HDDC3-201ENST00000330334 SEC22CQ9BRL7 303 aa12.61□□□□□ -0.39
HDDC3-201ENST00000330334 SLC50A1Q9BRV3 221 aa12.61□□□□□ -0.39
HDDC3-201ENST00000330334 ZNF331Q9NQX6 463 aaPredicted RBP12.61□□□□□ -0.39
HDDC3-201ENST00000330334 FAM240BA0A1B0GVZ2 78 aa12.6□□□□□ -0.39
HDDC3-201ENST00000330334 LYRM9A8MSI8 78 aa12.6□□□□□ -0.39
HDDC3-201ENST00000330334 COX7A2P2O60397 106 aa12.6□□□□□ -0.39
HDDC3-201ENST00000330334 PVALBP20472 110 aaPredicted RBP12.6□□□□□ -0.39
HDDC3-201ENST00000330334 BCAP31P51572 246 aa12.6□□□□□ -0.39
HDDC3-201ENST00000330334 CAV2P51636 162 aa12.6□□□□□ -0.39
HDDC3-201ENST00000330334 VWC2Q2TAL6 325 aa12.6□□□□□ -0.39
HDDC3-201ENST00000330334 Q6ZRG5 221 aa12.6□□□□□ -0.39
HDDC3-201ENST00000330334 TMEM256Q8N2U0 113 aa12.6□□□□□ -0.39
HDDC3-201ENST00000330334 CHAC2Q8WUX2 184 aa12.6□□□□□ -0.39
HDDC3-201ENST00000330334 RPUSD4Q96CM3 377 aaKnown RBP12.6□□□□□ -0.39
HDDC3-201ENST00000330334 DNAJC4Q9NNZ3 241 aa12.6□□□□□ -0.39
HDDC3-201ENST00000330334 LSM5Q9Y4Y9 91 aaKnown RBP12.6□□□□□ -0.39
HDDC3-201ENST00000330334 HECTD4Q9Y4D8 3996 aa12.6□□□□□ -0.39
HDDC3-201ENST00000330334 S100A11P31949 105 aa12.59□□□□□ -0.39
HDDC3-201ENST00000330334 CAMLGP49069 296 aa12.59□□□□□ -0.39
HDDC3-201ENST00000330334 DAD1P61803 113 aa12.59□□□□□ -0.39
HDDC3-201ENST00000330334 HIST1H1AQ02539 215 aaPredicted RBP12.59□□□□□ -0.39
HDDC3-201ENST00000330334 C10orf113Q5VZT2 155 aa12.59□□□□□ -0.39
HDDC3-201ENST00000330334 MZT2BQ6NZ67 158 aa12.59□□□□□ -0.39
HDDC3-201ENST00000330334 S100ZQ8WXG8 99 aa12.59□□□□□ -0.39
HDDC3-201ENST00000330334 LYRM2Q9NU23 88 aaPredicted RBP12.59□□□□□ -0.39
HDDC3-201ENST00000330334 UQCC1Q9NVA1 299 aa12.59□□□□□ -0.39
HDDC3-201ENST00000330334 PLA2G2EQ9NZK7 142 aa12.59□□□□□ -0.39
HDDC3-201ENST00000330334 WDR83OSQ9Y284 106 aa12.59□□□□□ -0.39
HDDC3-201ENST00000330334 ZNF705GA8MUZ8 300 aaPredicted RBP12.58□□□□□ -0.4
HDDC3-201ENST00000330334 CST7O76096 145 aa12.58□□□□□ -0.4
HDDC3-201ENST00000330334 SULT1A1P50225 295 aa12.58□□□□□ -0.4
HDDC3-201ENST00000330334 RHOBP62745 196 aa12.58□□□□□ -0.4
HDDC3-201ENST00000330334 LINC00336Q6ZUF6 198 aa12.58□□□□□ -0.4
HDDC3-201ENST00000330334 NRARPQ7Z6K4 114 aa12.58□□□□□ -0.4
HDDC3-201ENST00000330334 BAP18Q8IXM2 172 aa12.58□□□□□ -0.4
HDDC3-201ENST00000330334 PPP1R14DQ9NXH3 145 aa12.58□□□□□ -0.4
HDDC3-201ENST00000330334 FAM24AA6NFZ4 105 aa12.57□□□□□ -0.4
HDDC3-201ENST00000330334 IGLC2P0DOY2 106 aa12.57□□□□□ -0.4
HDDC3-201ENST00000330334 CDKN1BP46527 198 aa12.57□□□□□ -0.4
HDDC3-201ENST00000330334 RPL29P47914 159 aaKnown RBP12.57□□□□□ -0.4
HDDC3-201ENST00000330334 TAS2R60P59551 318 aa12.57□□□□□ -0.4
HDDC3-201ENST00000330334 ASAH1Q13510 395 aa12.57□□□□□ -0.4
HDDC3-201ENST00000330334 OPCMLQ14982 345 aa12.57□□□□□ -0.4
HDDC3-201ENST00000330334 GUK1Q16774 197 aa12.57□□□□□ -0.4
HDDC3-201ENST00000330334 TMEM252Q8N6L7 170 aa12.57□□□□□ -0.4
HDDC3-201ENST00000330334 OR1L4Q8NGR5 311 aa12.57□□□□□ -0.4
HDDC3-201ENST00000330334 SAT2Q96F10 170 aaPredicted RBP12.57□□□□□ -0.4
HDDC3-201ENST00000330334 PFDN5Q99471 154 aa12.57□□□□□ -0.4
HDDC3-201ENST00000330334 PXMP4Q9Y6I8 212 aa12.57□□□□□ -0.4
HDDC3-201ENST00000330334 DNAH2Q9P225 4427 aa12.57□□□□□ -0.4
HDDC3-201ENST00000330334 TRAV12-2A0A075B6T6 113 aa12.56□□□□□ -0.4
HDDC3-201ENST00000330334 PLAC8L1A1L4L8 177 aa12.56□□□□□ -0.4
HDDC3-201ENST00000330334 HBG1P69891 147 aa12.56□□□□□ -0.4
HDDC3-201ENST00000330334 HBG2P69892 147 aa12.56□□□□□ -0.4
HDDC3-201ENST00000330334 ATP6V1FQ16864 119 aa12.56□□□□□ -0.4
HDDC3-201ENST00000330334 LGALS9BQ3B8N2 356 aa12.56□□□□□ -0.4
HDDC3-201ENST00000330334 RNF212Q495C1 297 aa12.56□□□□□ -0.4
HDDC3-201ENST00000330334 MORN5Q5VZ52 161 aa12.56□□□□□ -0.4
HDDC3-201ENST00000330334 LINC01587Q99440 93 aa12.56□□□□□ -0.4
HDDC3-201ENST00000330334 C20orf144Q9BQM9 153 aa12.56□□□□□ -0.4
HDDC3-201ENST00000330334 PRM2P04554 102 aa12.55□□□□□ -0.4
HDDC3-201ENST00000330334 RAB32Q13637 225 aa12.55□□□□□ -0.4
HDDC3-201ENST00000330334 MIC13Q5XKP0 118 aa12.55□□□□□ -0.4
HDDC3-201ENST00000330334 ZNF493Q6ZR52 646 aa12.55□□□□□ -0.4
HDDC3-201ENST00000330334 STX12Q86Y82 276 aa12.55□□□□□ -0.4
HDDC3-201ENST00000330334 FAT2Q9NYQ8 4349 aa12.54□□□□□ -0.4
HDDC3-201ENST00000330334 H3BQ15 152 aa12.54□□□□□ -0.4
HDDC3-201ENST00000330334 ZNF253O75346 499 aa12.54□□□□□ -0.4
HDDC3-201ENST00000330334 HTN3P15516 51 aa12.54□□□□□ -0.4
HDDC3-201ENST00000330334 AZU1P20160 251 aa12.54□□□□□ -0.4
HDDC3-201ENST00000330334 S100A10P60903 97 aa12.54□□□□□ -0.4
HDDC3-201ENST00000330334 TMEM88Q6PEY1 159 aa12.54□□□□□ -0.4
HDDC3-201ENST00000330334 C15orf53Q8NAA6 179 aa12.54□□□□□ -0.4
HDDC3-201ENST00000330334 OR10J6PQ8NGY7 276 aa12.54□□□□□ -0.4
HDDC3-201ENST00000330334 SLC39A9Q9NUM3 307 aa12.54□□□□□ -0.4
HDDC3-201ENST00000330334 IGSF23A1L1A6 192 aa12.53□□□□□ -0.4
HDDC3-201ENST00000330334 H7BYZ3 331 aa12.53□□□□□ -0.4
HDDC3-201ENST00000330334 SLC17A3O00476 420 aa12.53□□□□□ -0.4
HDDC3-201ENST00000330334 MPDU1O75352 247 aa12.53□□□□□ -0.4
HDDC3-201ENST00000330334 C16orf74Q96GX8 76 aa12.53□□□□□ -0.4
HDDC3-201ENST00000330334 GPN1Q9HCN4 374 aaPredicted RBP12.53□□□□□ -0.4
HDDC3-201ENST00000330334 DNAH17Q9UFH2 4485 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms