RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 ZNF502Q8TBZ5 544 aa15.78■□□□□ 0.12
RIPPLY3-201ENST00000329553 RNF125Q96EQ8 232 aa15.78■□□□□ 0.12
RIPPLY3-201ENST00000329553 ZNF469Q96JG9 3925 aaPredicted RBP15.78■□□□□ 0.12
RIPPLY3-201ENST00000329553 COX19Q49B96 90 aa15.78■□□□□ 0.12
RIPPLY3-201ENST00000329553 WDR73Q6P4I2 378 aa15.78■□□□□ 0.12
RIPPLY3-201ENST00000329553 CHRDL1Q9BU40 450 aa15.78■□□□□ 0.12
RIPPLY3-201ENST00000329553 CDC42EP3Q9UKI2 254 aa15.78■□□□□ 0.12
RIPPLY3-201ENST00000329553 CREBBPQ92793 2442 aa15.77■□□□□ 0.12
RIPPLY3-201ENST00000329553 TEX15Q9BXT5 2789 aa15.77■□□□□ 0.12
RIPPLY3-201ENST00000329553 SMIM27A0A1W2PRY6 76 aa15.77■□□□□ 0.12
RIPPLY3-201ENST00000329553 IBA57Q5T440 356 aaKnown RBP15.77■□□□□ 0.12
RIPPLY3-201ENST00000329553 TMEM136Q6ZRR5 245 aa15.76■□□□□ 0.11
RIPPLY3-201ENST00000329553 C9orf139Q6ZV77 190 aa15.76■□□□□ 0.11
RIPPLY3-201ENST00000329553 PDZD2O15018 2839 aa15.76■□□□□ 0.11
RIPPLY3-201ENST00000329553 F2Z2F3 143 aa15.76■□□□□ 0.11
RIPPLY3-201ENST00000329553 GP9P14770 177 aa15.76■□□□□ 0.11
RIPPLY3-201ENST00000329553 SSTP61278 116 aa15.76■□□□□ 0.11
RIPPLY3-201ENST00000329553 USF2Q15853 346 aaPredicted RBP15.76■□□□□ 0.11
RIPPLY3-201ENST00000329553 BAGE3Q86Y29 109 aa15.76■□□□□ 0.11
RIPPLY3-201ENST00000329553 BAGE2Q86Y30 109 aa15.76■□□□□ 0.11
RIPPLY3-201ENST00000329553 NAT8BQ9UHF3 227 aa15.76■□□□□ 0.11
RIPPLY3-201ENST00000329553 CLEC3BP05452 202 aa15.75■□□□□ 0.11
RIPPLY3-201ENST00000329553 MGST1P10620 155 aaKnown RBP15.75■□□□□ 0.11
RIPPLY3-201ENST00000329553 GPR183P32249 361 aa15.75■□□□□ 0.11
RIPPLY3-201ENST00000329553 BLNKQ8WV28 456 aa15.75■□□□□ 0.11
RIPPLY3-201ENST00000329553 SHANK2-AS3Q9BTD1 123 aa15.75■□□□□ 0.11
RIPPLY3-201ENST00000329553 SMAD7O15105 426 aaKnown RBP15.74■□□□□ 0.11
RIPPLY3-201ENST00000329553 NBEAP1P0C6P0 100 aa15.74■□□□□ 0.11
RIPPLY3-201ENST00000329553 PPIFP30405 207 aaKnown RBP15.74■□□□□ 0.11
RIPPLY3-201ENST00000329553 ZNF329Q86UD4 541 aa15.74■□□□□ 0.11
RIPPLY3-201ENST00000329553 CCDC140Q96MF4 163 aa15.74■□□□□ 0.11
RIPPLY3-201ENST00000329553 GNB4Q9HAV0 340 aa15.74■□□□□ 0.11
RIPPLY3-201ENST00000329553 H3BRN7 92 aa15.74■□□□□ 0.11
RIPPLY3-201ENST00000329553 SPINK4O60575 86 aa15.74■□□□□ 0.11
RIPPLY3-201ENST00000329553 CD33P20138 364 aa15.74■□□□□ 0.11
RIPPLY3-201ENST00000329553 LINC00479Q96M42 142 aa15.74■□□□□ 0.11
RIPPLY3-201ENST00000329553 TCL1AP56279 114 aa15.73■□□□□ 0.11
RIPPLY3-201ENST00000329553 OR10J3Q5JRS4 329 aa15.73■□□□□ 0.11
RIPPLY3-201ENST00000329553 CLEC19AQ6UXS0 136 aa15.73■□□□□ 0.11
RIPPLY3-201ENST00000329553 Q6YL49 198 aa15.73■□□□□ 0.11
RIPPLY3-201ENST00000329553 TEX43Q6ZNM6 134 aa15.73■□□□□ 0.11
RIPPLY3-201ENST00000329553 EEF1AKMT3Q96AZ1 226 aa15.73■□□□□ 0.11
RIPPLY3-201ENST00000329553 ZNF414Q96IQ9 312 aa15.73■□□□□ 0.11
RIPPLY3-201ENST00000329553 IGHV3-35A0A0C4DH35 117 aa15.72■□□□□ 0.11
RIPPLY3-201ENST00000329553 ZNF705FA8MVS1 300 aaPredicted RBP15.72■□□□□ 0.11
RIPPLY3-201ENST00000329553 SCGB2A1O75556 95 aa15.72■□□□□ 0.11
RIPPLY3-201ENST00000329553 ZNF705DP0CH99 300 aaPredicted RBP15.72■□□□□ 0.11
RIPPLY3-201ENST00000329553 ZNF705BP0CI00 300 aaPredicted RBP15.72■□□□□ 0.11
RIPPLY3-201ENST00000329553 SLC35B1P78383 322 aa15.72■□□□□ 0.11
RIPPLY3-201ENST00000329553 ATP5G2Q06055 141 aa15.72■□□□□ 0.11
RIPPLY3-201ENST00000329553 FAM231DQ6ZW35 169 aa15.72■□□□□ 0.11
RIPPLY3-201ENST00000329553 TMEM14CQ9P0S9 112 aa15.72■□□□□ 0.11
RIPPLY3-201ENST00000329553 ITPR3Q14573 2671 aa15.72■□□□□ 0.11
RIPPLY3-201ENST00000329553 CCDC168Q8NDH2 2452 aa15.72■□□□□ 0.11
RIPPLY3-201ENST00000329553 H3BTX0 84 aa15.72■□□□□ 0.11
RIPPLY3-201ENST00000329553 TRGV3P03979 118 aa15.72■□□□□ 0.11
RIPPLY3-201ENST00000329553 TRBV7-1A0A0A6YYK4 115 aa15.71■□□□□ 0.11
RIPPLY3-201ENST00000329553 IZUMO1RA6ND01 250 aa15.71■□□□□ 0.11
RIPPLY3-201ENST00000329553 PEX7O00628 323 aa15.71■□□□□ 0.11
RIPPLY3-201ENST00000329553 EREGO14944 169 aa15.71■□□□□ 0.11
RIPPLY3-201ENST00000329553 HLA-DQA1P01909 254 aa15.71■□□□□ 0.11
RIPPLY3-201ENST00000329553 MYCNOSP40205 109 aa15.71■□□□□ 0.11
RIPPLY3-201ENST00000329553 TOMM20LQ6UXN7 152 aa15.71■□□□□ 0.11
RIPPLY3-201ENST00000329553 NHLRC2Q8NBF2 726 aa15.71■□□□□ 0.11
RIPPLY3-201ENST00000329553 SERTAD4Q9NUC0 356 aa15.71■□□□□ 0.11
RIPPLY3-201ENST00000329553 SAMD10Q9BYL1 202 aa15.71■□□□□ 0.1
RIPPLY3-201ENST00000329553 GCN1Q92616 2671 aaKnown RBP15.7■□□□□ 0.1
RIPPLY3-201ENST00000329553 FAM223BA6NKX1 122 aa15.7■□□□□ 0.1
RIPPLY3-201ENST00000329553 GPX1P07203 203 aa15.7■□□□□ 0.1
RIPPLY3-201ENST00000329553 FAM223AQ8IWN6 122 aa15.7■□□□□ 0.1
RIPPLY3-201ENST00000329553 FOXC2Q99958 501 aa15.7■□□□□ 0.1
RIPPLY3-201ENST00000329553 ZNF586Q9NXT0 402 aa15.7■□□□□ 0.1
RIPPLY3-201ENST00000329553 ITPR2Q14571 2701 aa15.7■□□□□ 0.1
RIPPLY3-201ENST00000329553 BMPR1BO00238 502 aa15.7■□□□□ 0.1
RIPPLY3-201ENST00000329553 HIST1H1EP10412 219 aaKnown RBP15.7■□□□□ 0.1
RIPPLY3-201ENST00000329553 MRPL54Q6P161 138 aaKnown RBP15.7■□□□□ 0.1
RIPPLY3-201ENST00000329553 SNHG12Q9BXW3 62 aa15.7■□□□□ 0.1
RIPPLY3-201ENST00000329553 IGHV3OR16-8A0A075B7F1 116 aa15.69■□□□□ 0.1
RIPPLY3-201ENST00000329553 CA1P00915 261 aaPredicted RBP15.69■□□□□ 0.1
RIPPLY3-201ENST00000329553 KIAA1644Q3SXP7 199 aa15.69■□□□□ 0.1
RIPPLY3-201ENST00000329553 BPIFA4PQ86YQ2 179 aa15.69■□□□□ 0.1
RIPPLY3-201ENST00000329553 WIPF2Q8TF74 440 aaPredicted RBP15.69■□□□□ 0.1
RIPPLY3-201ENST00000329553 C20orf144Q9BQM9 153 aa15.69■□□□□ 0.1
RIPPLY3-201ENST00000329553 VPREB3Q9UKI3 123 aa15.69■□□□□ 0.1
RIPPLY3-201ENST00000329553 PGPA6NDG6 321 aa15.68■□□□□ 0.1
RIPPLY3-201ENST00000329553 TMEM95Q3KNT9 176 aa15.68■□□□□ 0.1
RIPPLY3-201ENST00000329553 RASL11AQ6T310 242 aa15.68■□□□□ 0.1
RIPPLY3-201ENST00000329553 SIGLECL1Q8N7X8 197 aa15.68■□□□□ 0.1
RIPPLY3-201ENST00000329553 KLK15Q9H2R5 256 aa15.68■□□□□ 0.1
RIPPLY3-201ENST00000329553 MXRA5Q9NR99 2828 aa15.68■□□□□ 0.1
RIPPLY3-201ENST00000329553 MRPS12O15235 138 aaKnown RBP15.68■□□□□ 0.1
RIPPLY3-201ENST00000329553 BRI3O95415 125 aa15.68■□□□□ 0.1
RIPPLY3-201ENST00000329553 TDRG1Q3Y452 100 aa15.68■□□□□ 0.1
RIPPLY3-201ENST00000329553 KCNS1Q96KK3 526 aa15.68■□□□□ 0.1
RIPPLY3-201ENST00000329553 TRAV34A0A0B4J273 112 aa15.67■□□□□ 0.1
RIPPLY3-201ENST00000329553 H3BUA1 57 aa15.67■□□□□ 0.1
RIPPLY3-201ENST00000329553 HOXA3O43365 443 aaPredicted RBP15.67■□□□□ 0.1
RIPPLY3-201ENST00000329553 IL17RELQ6ZVW7 336 aa15.67■□□□□ 0.1
RIPPLY3-201ENST00000329553 S100A7AQ86SG5 101 aa15.67■□□□□ 0.1
RIPPLY3-201ENST00000329553 RCHY1Q96PM5 261 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms