RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 SMKR1H3BMG3 65 aa12.34□□□□□ -0.43
VARS2-201ENST00000321897 CD5LO43866 347 aa12.34□□□□□ -0.43
VARS2-201ENST00000321897 C17orf58Q2M2W7 97 aa12.34□□□□□ -0.43
VARS2-201ENST00000321897 BCL6BQ8N143 479 aaPredicted RBP12.34□□□□□ -0.43
VARS2-201ENST00000321897 MRPL27Q9P0M9 148 aaKnown RBP12.34□□□□□ -0.43
VARS2-201ENST00000321897 TMEM178BH3BS89 294 aa12.34□□□□□ -0.43
VARS2-201ENST00000321897 BVES-AS1Q5T3Y7 98 aa12.34□□□□□ -0.43
VARS2-201ENST00000321897 MAP1LC3AQ9H492 121 aa12.34□□□□□ -0.43
VARS2-201ENST00000321897 C11orf1Q9H5F2 150 aa12.34□□□□□ -0.43
VARS2-201ENST00000321897 TM4SF5O14894 197 aa12.33□□□□□ -0.43
VARS2-201ENST00000321897 IGLV2-14P01704 120 aa12.33□□□□□ -0.43
VARS2-201ENST00000321897 IGHV3-11P01762 117 aa12.33□□□□□ -0.43
VARS2-201ENST00000321897 C22orf34Q6ZV56 151 aa12.33□□□□□ -0.43
VARS2-201ENST00000321897 DPM3Q9P2X0 92 aa12.33□□□□□ -0.43
VARS2-201ENST00000321897 RNF114Q9Y508 228 aa12.33□□□□□ -0.43
VARS2-201ENST00000321897 IGHV2-70DA0A0C4DH43 119 aa12.33□□□□□ -0.44
VARS2-201ENST00000321897 IGLC7A0M8Q6 106 aa12.33□□□□□ -0.44
VARS2-201ENST00000321897 PMS2P5A8MQ11 134 aa12.33□□□□□ -0.44
VARS2-201ENST00000321897 NPIPB11E5RHQ5 1161 aa12.33□□□□□ -0.44
VARS2-201ENST00000321897 PF4V1P10720 104 aa12.33□□□□□ -0.44
VARS2-201ENST00000321897 KIAA1549Q9HCM3 1950 aa12.33□□□□□ -0.44
VARS2-201ENST00000321897 TMEM238C9JI98 176 aa12.33□□□□□ -0.44
VARS2-201ENST00000321897 SEC11AP67812 179 aa12.33□□□□□ -0.44
VARS2-201ENST00000321897 SSBP2P81877 361 aaPredicted RBP12.33□□□□□ -0.44
VARS2-201ENST00000321897 PAX2Q02962 417 aa12.33□□□□□ -0.44
VARS2-201ENST00000321897 ZNF295-AS1Q8N0V1 137 aa12.33□□□□□ -0.44
VARS2-201ENST00000321897 BEX4Q9NWD9 120 aaPredicted RBP12.33□□□□□ -0.44
VARS2-201ENST00000321897 H0YJW9 148 aa12.32□□□□□ -0.44
VARS2-201ENST00000321897 NDUFA3O95167 84 aa12.32□□□□□ -0.44
VARS2-201ENST00000321897 ESDP10768 282 aa12.32□□□□□ -0.44
VARS2-201ENST00000321897 GTSCR1Q86UQ5 136 aa12.32□□□□□ -0.44
VARS2-201ENST00000321897 K7EP13 123 aa12.32□□□□□ -0.44
VARS2-201ENST00000321897 ZNF672Q499Z4 452 aaPredicted RBP12.32□□□□□ -0.44
VARS2-201ENST00000321897 Q8NFD4 153 aa12.32□□□□□ -0.44
VARS2-201ENST00000321897 E7EQL1 145 aa12.32□□□□□ -0.44
VARS2-201ENST00000321897 PSG3Q16557 428 aa12.32□□□□□ -0.44
VARS2-201ENST00000321897 MRPL16Q9NX20 251 aaKnown RBP12.32□□□□□ -0.44
VARS2-201ENST00000321897 D6R8Y8 96 aa12.32□□□□□ -0.44
VARS2-201ENST00000321897 IGHV1-8P0DP01 117 aa12.32□□□□□ -0.44
VARS2-201ENST00000321897 IFI27L1Q96BM0 104 aa12.32□□□□□ -0.44
VARS2-201ENST00000321897 RNASE2P10153 161 aaKnown RBP12.31□□□□□ -0.44
VARS2-201ENST00000321897 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.31□□□□□ -0.44
VARS2-201ENST00000321897 NDUFB8O95169 186 aa12.31□□□□□ -0.44
VARS2-201ENST00000321897 TMEM219Q86XT9 240 aa12.31□□□□□ -0.44
VARS2-201ENST00000321897 ORMDL3Q8N138 153 aa12.31□□□□□ -0.44
VARS2-201ENST00000321897 TTC9CQ8N5M4 171 aa12.31□□□□□ -0.44
VARS2-201ENST00000321897 DPF1Q92782 380 aa12.31□□□□□ -0.44
VARS2-201ENST00000321897 SPRY4Q9C004 299 aa12.31□□□□□ -0.44
VARS2-201ENST00000321897 HCFC1P51610 2035 aa12.31□□□□□ -0.44
VARS2-201ENST00000321897 IGHV1-24A0A0C4DH33 117 aa12.31□□□□□ -0.44
VARS2-201ENST00000321897 A0A1W2PPI3 338 aa12.31□□□□□ -0.44
VARS2-201ENST00000321897 ETDBQ3ZM63 59 aa12.3□□□□□ -0.44
VARS2-201ENST00000321897 CHODLQ9H9P2 273 aa12.3□□□□□ -0.44
VARS2-201ENST00000321897 TCRBV4S1A1TA0A5B7 111 aa12.3□□□□□ -0.44
VARS2-201ENST00000321897 K7EMI3 77 aa12.3□□□□□ -0.44
VARS2-201ENST00000321897 NDUFS8O00217 210 aa12.3□□□□□ -0.44
VARS2-201ENST00000321897 IFI27P40305 119 aaPredicted RBP12.3□□□□□ -0.44
VARS2-201ENST00000321897 VDAC2P45880 294 aaPredicted RBP12.3□□□□□ -0.44
VARS2-201ENST00000321897 MFAP4P55083 255 aa12.3□□□□□ -0.44
VARS2-201ENST00000321897 MEF2CQ06413 473 aaPredicted RBP12.3□□□□□ -0.44
VARS2-201ENST00000321897 SLC25A48Q6ZT89 311 aaKnown RBP12.3□□□□□ -0.44
VARS2-201ENST00000321897 ZNF479Q96JC4 524 aa12.3□□□□□ -0.44
VARS2-201ENST00000321897 ARMS2P0C7Q2 107 aa12.3□□□□□ -0.44
VARS2-201ENST00000321897 CHCHD1Q96BP2 118 aaKnown RBP12.3□□□□□ -0.44
VARS2-201ENST00000321897 C1RLQ9NZP8 487 aa12.3□□□□□ -0.44
VARS2-201ENST00000321897 PROP1O75360 226 aa12.29□□□□□ -0.44
VARS2-201ENST00000321897 WT1-ASQ06250 92 aa12.29□□□□□ -0.44
VARS2-201ENST00000321897 HSD52Q0P140 79 aa12.29□□□□□ -0.44
VARS2-201ENST00000321897 SEM1Q6ZVN7 128 aa12.29□□□□□ -0.44
VARS2-201ENST00000321897 Q8TAT8 98 aa12.29□□□□□ -0.44
VARS2-201ENST00000321897 TP53TG3Q9ULZ0 132 aa12.29□□□□□ -0.44
VARS2-201ENST00000321897 OR11H12B2RN74 326 aa12.29□□□□□ -0.44
VARS2-201ENST00000321897 C10orf142B7Z368 130 aa12.29□□□□□ -0.44
VARS2-201ENST00000321897 LEPP41159 167 aa12.29□□□□□ -0.44
VARS2-201ENST00000321897 OR11H1Q8NG94 326 aa12.29□□□□□ -0.44
VARS2-201ENST00000321897 OR11H2Q8NH07 326 aa12.29□□□□□ -0.44
VARS2-201ENST00000321897 Q8TCH9 128 aa12.29□□□□□ -0.44
VARS2-201ENST00000321897 GLMPQ8WWB7 406 aa12.29□□□□□ -0.44
VARS2-201ENST00000321897 CACNG8Q8WXS5 425 aa12.29□□□□□ -0.44
VARS2-201ENST00000321897 NDUFS7O75251 213 aa12.29□□□□□ -0.44
VARS2-201ENST00000321897 TMPRSS3P57727 454 aa12.29□□□□□ -0.44
VARS2-201ENST00000321897 RBX1P62877 108 aa12.29□□□□□ -0.44
VARS2-201ENST00000321897 CLEC19AQ6UXS0 136 aa12.29□□□□□ -0.44
VARS2-201ENST00000321897 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.29□□□□□ -0.44
VARS2-201ENST00000321897 KRTAP27-1Q3LI81 207 aa12.28□□□□□ -0.44
VARS2-201ENST00000321897 ADAMTSL5Q6ZMM2 481 aa12.28□□□□□ -0.44
VARS2-201ENST00000321897 AMN1Q8IY45 258 aa12.28□□□□□ -0.44
VARS2-201ENST00000321897 TSSC4Q9Y5U2 329 aaPredicted RBP12.28□□□□□ -0.44
VARS2-201ENST00000321897 CFHR2P36980 270 aa12.28□□□□□ -0.44
VARS2-201ENST00000321897 MORN5Q5VZ52 161 aa12.28□□□□□ -0.44
VARS2-201ENST00000321897 HBDP02042 147 aa12.28□□□□□ -0.44
VARS2-201ENST00000321897 SMIM17P0DL12 118 aa12.28□□□□□ -0.44
VARS2-201ENST00000321897 Q6ZSR3 168 aa12.28□□□□□ -0.44
VARS2-201ENST00000321897 MS4A6AQ9H2W1 248 aa12.28□□□□□ -0.44
VARS2-201ENST00000321897 LY96Q9Y6Y9 160 aa12.28□□□□□ -0.44
VARS2-201ENST00000321897 K7ERJ3 54 aa12.27□□□□□ -0.44
VARS2-201ENST00000321897 SRD5A1P18405 259 aa12.27□□□□□ -0.44
VARS2-201ENST00000321897 NPIPB5A8MRT5 1133 aa12.27□□□□□ -0.45
VARS2-201ENST00000321897 CKS1BP61024 79 aa12.27□□□□□ -0.45
VARS2-201ENST00000321897 AMTNQ6UX39 209 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms