RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 LSM4Q9Y4Z0 139 aaKnown RBP13.87□□□□□ -0.19
GABRB3-202ENST00000311550 LOXP28300 417 aaPredicted RBP13.87□□□□□ -0.19
GABRB3-202ENST00000311550 MS4A6AQ9H2W1 248 aa13.87□□□□□ -0.19
GABRB3-202ENST00000311550 MOB4Q9Y3A3 225 aa13.87□□□□□ -0.19
GABRB3-202ENST00000311550 MINOS1Q5TGZ0 78 aa13.86□□□□□ -0.19
GABRB3-202ENST00000311550 MINOS1-NBL1R4GNA1 71 aa13.86□□□□□ -0.19
GABRB3-202ENST00000311550 A0A1W2PRX2 142 aa13.86□□□□□ -0.19
GABRB3-202ENST00000311550 Q6ZWC4 215 aa13.86□□□□□ -0.19
GABRB3-202ENST00000311550 MRAP2Q96G30 205 aa13.86□□□□□ -0.19
GABRB3-202ENST00000311550 IFI27P40305 119 aaPredicted RBP13.86□□□□□ -0.19
GABRB3-202ENST00000311550 FREM1Q5H8C1 2179 aa13.86□□□□□ -0.19
GABRB3-202ENST00000311550 M0R1W7 72 aa13.86□□□□□ -0.19
GABRB3-202ENST00000311550 TDGF1P3P51864 188 aa13.86□□□□□ -0.19
GABRB3-202ENST00000311550 ERCC8Q13216 396 aa13.86□□□□□ -0.19
GABRB3-202ENST00000311550 Q6ZSR3 168 aa13.86□□□□□ -0.19
GABRB3-202ENST00000311550 LINC01587Q99440 93 aa13.86□□□□□ -0.19
GABRB3-202ENST00000311550 SLAQ13239 276 aa13.86□□□□□ -0.19
GABRB3-202ENST00000311550 KRTAP27-1Q3LI81 207 aa13.85□□□□□ -0.19
GABRB3-202ENST00000311550 SPRNQ5BIV9 151 aa13.85□□□□□ -0.19
GABRB3-202ENST00000311550 PSMG4Q5JS54 123 aa13.85□□□□□ -0.19
GABRB3-202ENST00000311550 MEGF9Q9H1U4 602 aa13.85□□□□□ -0.19
GABRB3-202ENST00000311550 CHTOPQ9Y3Y2 248 aaKnown RBP13.85□□□□□ -0.19
GABRB3-202ENST00000311550 NCOA6Q14686 2063 aaPredicted RBP13.85□□□□□ -0.19
GABRB3-202ENST00000311550 OBSL1O75147 1896 aa13.85□□□□□ -0.19
GABRB3-202ENST00000311550 SNHG12Q9BXW3 62 aa13.85□□□□□ -0.19
GABRB3-202ENST00000311550 CYSLTR1Q9Y271 337 aa13.85□□□□□ -0.19
GABRB3-202ENST00000311550 IGLV3-9A0A075B6K5 115 aa13.84□□□□□ -0.19
GABRB3-202ENST00000311550 ORMDL2Q53FV1 153 aa13.84□□□□□ -0.19
GABRB3-202ENST00000311550 LYPD1Q8N2G4 141 aa13.84□□□□□ -0.19
GABRB3-202ENST00000311550 MED13Q9UHV7 2174 aa13.84□□□□□ -0.19
GABRB3-202ENST00000311550 OOSP1A8MZH6 123 aa13.84□□□□□ -0.19
GABRB3-202ENST00000311550 YPEL3P61236 119 aaPredicted RBP13.84□□□□□ -0.19
GABRB3-202ENST00000311550 TMEM213A2RRL7 107 aa13.84□□□□□ -0.19
GABRB3-202ENST00000311550 CFHR2P36980 270 aa13.84□□□□□ -0.19
GABRB3-202ENST00000311550 SSBP2P81877 361 aaPredicted RBP13.84□□□□□ -0.19
GABRB3-202ENST00000311550 LAGE3Q14657 143 aa13.84□□□□□ -0.19
GABRB3-202ENST00000311550 CD300EQ496F6 205 aaPredicted RBP13.84□□□□□ -0.19
GABRB3-202ENST00000311550 ZGRF1Q86YA3 2104 aa13.84□□□□□ -0.19
GABRB3-202ENST00000311550 OVOL1O14753 267 aa13.83□□□□□ -0.19
GABRB3-202ENST00000311550 CEACAM8P31997 349 aaPredicted RBP13.83□□□□□ -0.19
GABRB3-202ENST00000311550 HSD52Q0P140 79 aa13.83□□□□□ -0.19
GABRB3-202ENST00000311550 IGKV3D-20A0A0C4DH25 116 aa13.83□□□□□ -0.2
GABRB3-202ENST00000311550 H3BUX3 64 aa13.83□□□□□ -0.2
GABRB3-202ENST00000311550 WT1P19544 449 aaPredicted RBP13.83□□□□□ -0.2
GABRB3-202ENST00000311550 OR2K2Q8NGT1 345 aa13.83□□□□□ -0.2
GABRB3-202ENST00000311550 PRTN3P24158 256 aa13.83□□□□□ -0.2
GABRB3-202ENST00000311550 C8orf49Q96NF6 230 aa13.83□□□□□ -0.2
GABRB3-202ENST00000311550 COL4A4P53420 1690 aaPredicted RBP13.83□□□□□ -0.2
GABRB3-202ENST00000311550 BPESC1Q9GZL8 116 aa13.83□□□□□ -0.2
GABRB3-202ENST00000311550 NCOR1P1Q9H4R4 102 aa13.83□□□□□ -0.2
GABRB3-202ENST00000311550 BDP1A6H8Y1 2624 aa13.83□□□□□ -0.2
GABRB3-202ENST00000311550 SAA4P35542 130 aa13.83□□□□□ -0.2
GABRB3-202ENST00000311550 KIAA1549LQ6ZVL6 1849 aa13.82□□□□□ -0.2
GABRB3-202ENST00000311550 ZNF815PA8K554 130 aa13.82□□□□□ -0.2
GABRB3-202ENST00000311550 K7EN84 100 aa13.82□□□□□ -0.2
GABRB3-202ENST00000311550 SEC11AP67812 179 aa13.82□□□□□ -0.2
GABRB3-202ENST00000311550 TEX36Q5VZQ5 186 aa13.82□□□□□ -0.2
GABRB3-202ENST00000311550 VCX2Q9H322 139 aa13.82□□□□□ -0.2
GABRB3-202ENST00000311550 NDUFB8O95169 186 aa13.81□□□□□ -0.2
GABRB3-202ENST00000311550 IGFL3Q6UXB1 125 aa13.81□□□□□ -0.2
GABRB3-202ENST00000311550 RNF182Q8N6D2 247 aa13.81□□□□□ -0.2
GABRB3-202ENST00000311550 IGHV3-64A0A075B6Q5 118 aa13.81□□□□□ -0.2
GABRB3-202ENST00000311550 PRR20EP86478 221 aa13.81□□□□□ -0.2
GABRB3-202ENST00000311550 PRR20CP86479 221 aa13.81□□□□□ -0.2
GABRB3-202ENST00000311550 PRR20DP86480 221 aa13.81□□□□□ -0.2
GABRB3-202ENST00000311550 PRR20BP86481 221 aa13.81□□□□□ -0.2
GABRB3-202ENST00000311550 PRR20AP86496 221 aa13.81□□□□□ -0.2
GABRB3-202ENST00000311550 C11orf44Q8N8P7 122 aa13.81□□□□□ -0.2
GABRB3-202ENST00000311550 C20orf144Q9BQM9 153 aa13.81□□□□□ -0.2
GABRB3-202ENST00000311550 PCDH15Q96QU1 1955 aa13.81□□□□□ -0.2
GABRB3-202ENST00000311550 TMEM158Q8WZ71 300 aa13.81□□□□□ -0.2
GABRB3-202ENST00000311550 ALPK3Q96L96 1907 aa13.81□□□□□ -0.2
GABRB3-202ENST00000311550 ZNF688P0C7X2 276 aa13.81□□□□□ -0.2
GABRB3-202ENST00000311550 GNLYP22749 145 aa13.81□□□□□ -0.2
GABRB3-202ENST00000311550 BCL6BQ8N143 479 aaPredicted RBP13.8□□□□□ -0.2
GABRB3-202ENST00000311550 ZNF562Q6V9R5 426 aa13.8□□□□□ -0.2
GABRB3-202ENST00000311550 GFRA4Q9GZZ7 299 aa13.8□□□□□ -0.2
GABRB3-202ENST00000311550 TMEM249Q2WGJ8 235 aa13.8□□□□□ -0.2
GABRB3-202ENST00000311550 C14orf178Q8N769 122 aaPredicted RBP13.8□□□□□ -0.2
GABRB3-202ENST00000311550 STPG4Q8N801 248 aa13.8□□□□□ -0.2
GABRB3-202ENST00000311550 C11orf52Q96A22 123 aa13.8□□□□□ -0.2
GABRB3-202ENST00000311550 PRSS22Q9GZN4 317 aa13.8□□□□□ -0.2
GABRB3-202ENST00000311550 TRBV19A0A075B6N1 114 aa13.79□□□□□ -0.2
GABRB3-202ENST00000311550 RNASE1P07998 156 aaKnown RBP13.79□□□□□ -0.2
GABRB3-202ENST00000311550 C3orf36Q3SXR2 165 aa13.79□□□□□ -0.2
GABRB3-202ENST00000311550 OR9G4Q8NGQ1 327 aa13.79□□□□□ -0.2
GABRB3-202ENST00000311550 ZNF492Q9P255 531 aa13.79□□□□□ -0.2
GABRB3-202ENST00000311550 RIPPLY3P57055 190 aa13.79□□□□□ -0.2
GABRB3-202ENST00000311550 SAMD5Q5TGI4 173 aa13.79□□□□□ -0.2
GABRB3-202ENST00000311550 RCHY1Q96PM5 261 aa13.79□□□□□ -0.2
GABRB3-202ENST00000311550 TRBV7-1A0A0A6YYK4 115 aa13.79□□□□□ -0.2
GABRB3-202ENST00000311550 TMEM262E9PQX1 116 aa13.79□□□□□ -0.2
GABRB3-202ENST00000311550 SMIM27A0A1W2PRY6 76 aa13.78□□□□□ -0.2
GABRB3-202ENST00000311550 FCN3O75636 299 aa13.78□□□□□ -0.2
GABRB3-202ENST00000311550 SAMD13Q5VXD3 122 aa13.78□□□□□ -0.2
GABRB3-202ENST00000311550 C9orf139Q6ZV77 190 aa13.78□□□□□ -0.2
GABRB3-202ENST00000311550 ZNF479Q96JC4 524 aa13.78□□□□□ -0.2
GABRB3-202ENST00000311550 LTBP2Q14767 1821 aa13.78□□□□□ -0.2
GABRB3-202ENST00000311550 PCNX3Q9H6A9 2034 aa13.78□□□□□ -0.2
GABRB3-202ENST00000311550 EMP1P54849 157 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms