RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 SLC39A9Q9NUM3 307 aa3.86□□□□□ -1.79
CAST-201ENST00000309190 F6UB75 175 aa3.86□□□□□ -1.79
CAST-201ENST00000309190 CLDN34H7C241 214 aa3.86□□□□□ -1.79
CAST-201ENST00000309190 M0R3E3 92 aa3.86□□□□□ -1.79
CAST-201ENST00000309190 NECAP1Q8NC96 275 aa3.86□□□□□ -1.79
CAST-201ENST00000309190 OR5AN1Q8NGI8 311 aa3.86□□□□□ -1.79
CAST-201ENST00000309190 OR5B3Q8NH48 314 aa3.86□□□□□ -1.79
CAST-201ENST00000309190 C8orf46Q8TAG6 207 aa3.86□□□□□ -1.79
CAST-201ENST00000309190 DDB2Q92466 427 aa3.86□□□□□ -1.79
CAST-201ENST00000309190 LINC00479Q96M42 142 aa3.86□□□□□ -1.79
CAST-201ENST00000309190 C17orf77Q96MU5 243 aa3.86□□□□□ -1.79
CAST-201ENST00000309190 WFDC10AQ9H1F0 79 aa3.86□□□□□ -1.79
CAST-201ENST00000309190 TRAV8-1A0A0A6YYK1 113 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 BORCS7-ASMTA0A0B4J1R7 106 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 COX7A2P2O60397 106 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 DFFBO76075 338 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 MFAP2P55001 183 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 TMEM241Q24JQ0 296 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 MORN5Q5VZ52 161 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 C16orf82Q7Z2V1 217 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 RNF182Q8N6D2 247 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 OR4X2Q8NGF9 303 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 SPATA3Q8NHX4 192 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 ZNF503Q96F45 646 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 PRSS22Q9GZN4 317 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 M0R1W7 72 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 DEFB4AO15263 64 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 SAP30O75446 220 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 APOHP02749 345 aaPredicted RBP3.85□□□□□ -1.79
CAST-201ENST00000309190 ZNF688P0C7X2 276 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 RD3LP0DJH9 198 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 HBG1P69891 147 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 HBG2P69892 147 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 MEF2BQ02080 365 aaPredicted RBP3.85□□□□□ -1.79
CAST-201ENST00000309190 LOXL1Q08397 574 aaPredicted RBP3.85□□□□□ -1.79
CAST-201ENST00000309190 UNQ9165/PRO28630Q6UXU0 137 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 SERTAD4Q9NUC0 356 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 SRRM2Q9UQ35 2752 aaKnown RBP3.85□□□□□ -1.79
CAST-201ENST00000309190 C15orf61A6NNL5 157 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 C15orf62A8K5M9 175 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 ZNF705FA8MVS1 300 aaPredicted RBP3.85□□□□□ -1.79
CAST-201ENST00000309190 TNFRSF13BO14836 293 aaPredicted RBP3.85□□□□□ -1.79
CAST-201ENST00000309190 FRMD6-AS1P0C7T7 363 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 MGST1P10620 155 aaKnown RBP3.85□□□□□ -1.79
CAST-201ENST00000309190 PSG1P11464 419 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 FABP4P15090 132 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 NDUFA6P56556 154 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 DSCR9P59020 149 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 ERVFC1-1P60608 527 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 Q0VG73 95 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 SLAQ13239 276 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 OR4F17Q8NGA8 305 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 OR4A5Q8NH83 315 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 VSTM2AQ8TAG5 236 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 MBD6Q96DN6 1003 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 URB1-AS1Q96HZ7 61 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 ADTRPQ96IZ2 230 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 IGF2BP2-AS1Q96M15 143 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 OR4F4Q96R69 305 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 RAB40CQ96S21 281 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 PARLQ9H300 379 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 C21orf62Q9NYP8 219 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 NAT8Q9UHE5 227 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 PRNDQ9UKY0 176 aa3.85□□□□□ -1.79
CAST-201ENST00000309190 A0A1B0GUS0 222 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 TEX22C9J3V5 150 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 TCF21O43680 179 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 TOMM40O96008 361 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 G0S2P27469 103 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 IER3P46695 156 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 GNG5P63218 68 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 Q6ZSV7 163 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 MIR17HGQ75NE6 70 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 PDPNQ86YL7 162 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 OSR1Q8TAX0 266 aaPredicted RBP3.84□□□□□ -1.79
CAST-201ENST00000309190 PIFOQ8TCI5 191 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 JMJD8Q96S16 334 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 MOB4Q9Y3A3 225 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 IGKV1OR2-108A0A075B7D4 117 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 PAGE4O60829 102 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 RPL35AP18077 110 aaKnown RBP3.84□□□□□ -1.79
CAST-201ENST00000309190 PPIFP30405 207 aaKnown RBP3.84□□□□□ -1.79
CAST-201ENST00000309190 RBX1P62877 108 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 ATP5G2Q06055 141 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 RBPMS2Q6ZRY4 209 aaKnown RBP3.84□□□□□ -1.79
CAST-201ENST00000309190 ZNF833PQ6ZTB9 187 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 EXOC3-AS1Q8N2X6 119 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 OR10G7Q8NGN6 311 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 LINC00477Q96M19 166 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 VPREB3Q9UKI3 123 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 LY96Q9Y6Y9 160 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 VWC2LB2RUY7 222 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 CRXO43186 299 aaPredicted RBP3.84□□□□□ -1.79
CAST-201ENST00000309190 STAG3L2P0CL84 134 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 SUB1P53999 127 aaKnown RBP eCLIP3.84□□□□□ -1.792e-6■□□□□ 10
CAST-201ENST00000309190 RHOBP62745 196 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 DEFA6Q01524 100 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 ZNF575Q86XF7 245 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 TMEM256Q8N2U0 113 aa3.84□□□□□ -1.79
CAST-201ENST00000309190 LY6G5BQ8NDX9 201 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms