RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 M0R3E3 92 aa11.21□□□□□ -0.62
PRKAB1-201ENST00000229328 RAB4AP20338 218 aa11.21□□□□□ -0.62
PRKAB1-201ENST00000229328 COL8A1P27658 744 aa11.21□□□□□ -0.62
PRKAB1-201ENST00000229328 USP9YO00507 2555 aaPredicted RBP11.2□□□□□ -0.62
PRKAB1-201ENST00000229328 GRIFINA4D1Z8 144 aa11.2□□□□□ -0.62
PRKAB1-201ENST00000229328 H3BUX3 64 aa11.2□□□□□ -0.62
PRKAB1-201ENST00000229328 AMBPP02760 352 aa11.2□□□□□ -0.62
PRKAB1-201ENST00000229328 CLEC19AQ6UXS0 136 aa11.2□□□□□ -0.62
PRKAB1-201ENST00000229328 PRNTQ86SH4 94 aa11.2□□□□□ -0.62
PRKAB1-201ENST00000229328 Q86TA4 180 aa11.2□□□□□ -0.62
PRKAB1-201ENST00000229328 KRTAP10-9P60411 292 aa11.2□□□□□ -0.62
PRKAB1-201ENST00000229328 C19orf54Q5BKX5 351 aa11.2□□□□□ -0.62
PRKAB1-201ENST00000229328 TOMM20LQ6UXN7 152 aa11.2□□□□□ -0.62
PRKAB1-201ENST00000229328 CIARTQ8N365 385 aaPredicted RBP11.2□□□□□ -0.62
PRKAB1-201ENST00000229328 MAPK1IP1LQ8NDC0 245 aa11.2□□□□□ -0.62
PRKAB1-201ENST00000229328 SMIM12Q96EX1 92 aa11.2□□□□□ -0.62
PRKAB1-201ENST00000229328 GRAMD2BQ96HH9 432 aa11.2□□□□□ -0.62
PRKAB1-201ENST00000229328 PACRGQ96M98 296 aaPredicted RBP11.2□□□□□ -0.62
PRKAB1-201ENST00000229328 RABAC1Q9UI14 185 aa11.2□□□□□ -0.62
PRKAB1-201ENST00000229328 RNF24Q9Y225 148 aa11.2□□□□□ -0.62
PRKAB1-201ENST00000229328 ZANQ9Y493 2812 aa11.19□□□□□ -0.62
PRKAB1-201ENST00000229328 TRAV41A0A0B4J266 112 aa11.19□□□□□ -0.62
PRKAB1-201ENST00000229328 DSCR9P59020 149 aa11.19□□□□□ -0.62
PRKAB1-201ENST00000229328 TMEM136Q6ZRR5 245 aa11.19□□□□□ -0.62
PRKAB1-201ENST00000229328 TMEM256Q8N2U0 113 aa11.19□□□□□ -0.62
PRKAB1-201ENST00000229328 GNB1LQ9BYB4 327 aa11.19□□□□□ -0.62
PRKAB1-201ENST00000229328 SMAD5-AS1Q9Y6J3 95 aa11.19□□□□□ -0.62
PRKAB1-201ENST00000229328 A0A096LNT2 108 aa11.19□□□□□ -0.62
PRKAB1-201ENST00000229328 IZUMO1RA6ND01 250 aa11.19□□□□□ -0.62
PRKAB1-201ENST00000229328 NUPR1O60356 82 aa11.19□□□□□ -0.62
PRKAB1-201ENST00000229328 ZFAND3Q9H8U3 227 aa11.19□□□□□ -0.62
PRKAB1-201ENST00000229328 GNB4Q9HAV0 340 aa11.19□□□□□ -0.62
PRKAB1-201ENST00000229328 PTPN13Q12923 2485 aa11.18□□□□□ -0.62
PRKAB1-201ENST00000229328 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.18□□□□□ -0.628e-8■■■■■ 43.5
PRKAB1-201ENST00000229328 C19orf71A6NCJ1 209 aa11.18□□□□□ -0.62
PRKAB1-201ENST00000229328 S100A7AQ86SG5 101 aa11.18□□□□□ -0.62
PRKAB1-201ENST00000229328 LYPD1Q8N2G4 141 aa11.18□□□□□ -0.62
PRKAB1-201ENST00000229328 NUP35Q8NFH5 326 aa11.18□□□□□ -0.62
PRKAB1-201ENST00000229328 A6NDX4 124 aa11.18□□□□□ -0.62
PRKAB1-201ENST00000229328 ZNF785A8K8V0 405 aa11.18□□□□□ -0.62
PRKAB1-201ENST00000229328 SCGB2A1O75556 95 aa11.18□□□□□ -0.62
PRKAB1-201ENST00000229328 SLC25A16P16260 332 aa11.18□□□□□ -0.62
PRKAB1-201ENST00000229328 PRSS22Q9GZN4 317 aa11.18□□□□□ -0.62
PRKAB1-201ENST00000229328 TP53TG3Q9ULZ0 132 aa11.18□□□□□ -0.62
PRKAB1-201ENST00000229328 A8MWP6 167 aa11.17□□□□□ -0.62
PRKAB1-201ENST00000229328 DIRC3C9JPN6 131 aa11.17□□□□□ -0.62
PRKAB1-201ENST00000229328 EREGO14944 169 aa11.17□□□□□ -0.62
PRKAB1-201ENST00000229328 Q6ZS46 218 aa11.17□□□□□ -0.62
PRKAB1-201ENST00000229328 TSKUQ8WUA8 353 aa11.17□□□□□ -0.62
PRKAB1-201ENST00000229328 NDUFAF3Q9BU61 184 aa11.17□□□□□ -0.62
PRKAB1-201ENST00000229328 NAT8BQ9UHF3 227 aa11.17□□□□□ -0.62
PRKAB1-201ENST00000229328 ABCA12Q86UK0 2595 aa11.17□□□□□ -0.62
PRKAB1-201ENST00000229328 BMPR1BO00238 502 aa11.17□□□□□ -0.62
PRKAB1-201ENST00000229328 KIAA1644Q3SXP7 199 aa11.17□□□□□ -0.62
PRKAB1-201ENST00000229328 IGFL4Q6B9Z1 124 aa11.17□□□□□ -0.62
PRKAB1-201ENST00000229328 OR5R1Q8NH85 324 aa11.17□□□□□ -0.62
PRKAB1-201ENST00000229328 EEF1AKMT3Q96AZ1 226 aa11.17□□□□□ -0.62
PRKAB1-201ENST00000229328 NOL4LQ96MY1 436 aaPredicted RBP11.17□□□□□ -0.62
PRKAB1-201ENST00000229328 CSPG4Q6UVK1 2322 aa11.17□□□□□ -0.62
PRKAB1-201ENST00000229328 NBPF19A0A087WUL8 3843 aa11.16□□□□□ -0.62
PRKAB1-201ENST00000229328 CLPSL1A2RUU4 121 aa11.16□□□□□ -0.62
PRKAB1-201ENST00000229328 HIGD1CA8MV81 97 aa11.16□□□□□ -0.62
PRKAB1-201ENST00000229328 RPL7P18124 248 aaKnown RBP11.16□□□□□ -0.62
PRKAB1-201ENST00000229328 CRIP2P52943 208 aaPredicted RBP11.16□□□□□ -0.62
PRKAB1-201ENST00000229328 BLCAPP62952 87 aa11.16□□□□□ -0.62
PRKAB1-201ENST00000229328 PDE6HQ13956 83 aa11.16□□□□□ -0.62
PRKAB1-201ENST00000229328 TCF24Q7RTU0 167 aa11.16□□□□□ -0.62
PRKAB1-201ENST00000229328 TMEM75Q8N9X5 138 aa11.16□□□□□ -0.62
PRKAB1-201ENST00000229328 RPP21Q9H633 154 aaKnown RBP11.16□□□□□ -0.62
PRKAB1-201ENST00000229328 ZNF492Q9P255 531 aa11.16□□□□□ -0.62
PRKAB1-201ENST00000229328 F2Z2F3 143 aa11.16□□□□□ -0.62
PRKAB1-201ENST00000229328 GDF5OSQ5U4N7 250 aa11.16□□□□□ -0.62
PRKAB1-201ENST00000229328 ZC2HC1AQ96GY0 325 aa11.16□□□□□ -0.62
PRKAB1-201ENST00000229328 PSG8Q9UQ74 426 aa11.16□□□□□ -0.62
PRKAB1-201ENST00000229328 IGHV3-66A0A0C4DH42 116 aa11.15□□□□□ -0.62
PRKAB1-201ENST00000229328 P01737 135 aa11.15□□□□□ -0.62
PRKAB1-201ENST00000229328 LINC00310P59036 64 aa11.15□□□□□ -0.62
PRKAB1-201ENST00000229328 ATP5G2Q06055 141 aa11.15□□□□□ -0.62
PRKAB1-201ENST00000229328 PSG3Q16557 428 aa11.15□□□□□ -0.62
PRKAB1-201ENST00000229328 WDR73Q6P4I2 378 aa11.15□□□□□ -0.62
PRKAB1-201ENST00000229328 GBGT1Q8N5D6 347 aa11.15□□□□□ -0.62
PRKAB1-201ENST00000229328 LINC01356Q8N9X3 169 aa11.15□□□□□ -0.62
PRKAB1-201ENST00000229328 AAMDCQ9H7C9 122 aa11.15□□□□□ -0.62
PRKAB1-201ENST00000229328 IGHV3OR16-13A0A075B7E8 117 aa11.15□□□□□ -0.62
PRKAB1-201ENST00000229328 TRBV7-1A0A0A6YYK4 115 aa11.15□□□□□ -0.62
PRKAB1-201ENST00000229328 IGHV3-74A0A0B4J1X5 117 aa11.15□□□□□ -0.62
PRKAB1-201ENST00000229328 TRBV6-1A0A0K0K1D8 114 aa11.15□□□□□ -0.62
PRKAB1-201ENST00000229328 APOHP02749 345 aaPredicted RBP11.15□□□□□ -0.62
PRKAB1-201ENST00000229328 CRISP2P16562 243 aa11.15□□□□□ -0.62
PRKAB1-201ENST00000229328 HLA-DMBP28068 263 aa11.15□□□□□ -0.62
PRKAB1-201ENST00000229328 CHD6Q8TD26 2715 aa11.15□□□□□ -0.62
PRKAB1-201ENST00000229328 GTSF1Q8WW33 167 aa11.15□□□□□ -0.62
PRKAB1-201ENST00000229328 ZNF207O43670 478 aaKnown RBP11.14□□□□□ -0.63
PRKAB1-201ENST00000229328 TRGV3P03979 118 aa11.14□□□□□ -0.63
PRKAB1-201ENST00000229328 IGF1P05019 195 aa11.14□□□□□ -0.63
PRKAB1-201ENST00000229328 RPL19P84098 196 aaKnown RBP11.14□□□□□ -0.63
PRKAB1-201ENST00000229328 BUB3O43684 328 aa11.14□□□□□ -0.63
PRKAB1-201ENST00000229328 IGHG2P01859 326 aa11.14□□□□□ -0.63
PRKAB1-201ENST00000229328 IGHG4P01861 327 aa11.14□□□□□ -0.63
PRKAB1-201ENST00000229328 MT-ND6P03923 174 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms