RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 GPR82Q96P67 336 aa12.13□□□□□ -0.47
COLCA2-206ENST00000638573 NPCDR1Q9BY65 106 aa12.13□□□□□ -0.47
COLCA2-206ENST00000638573 SLC25A39Q9BZJ4 359 aaPredicted RBP12.13□□□□□ -0.47
COLCA2-206ENST00000638573 SMIM3Q9BZL3 60 aa12.13□□□□□ -0.47
COLCA2-206ENST00000638573 ARV1Q9H2C2 271 aa12.13□□□□□ -0.47
COLCA2-206ENST00000638573 NRN1Q9NPD7 142 aa12.13□□□□□ -0.47
COLCA2-206ENST00000638573 SACSQ9NZJ4 4579 aa12.12□□□□□ -0.47
COLCA2-206ENST00000638573 ELOA3CA0A087WX78 387 aaPredicted RBP12.12□□□□□ -0.47
COLCA2-206ENST00000638573 FXYD6-FXYD2A0A087WZ82 144 aa12.12□□□□□ -0.47
COLCA2-206ENST00000638573 C17orf112F2Z3M2 114 aa12.12□□□□□ -0.47
COLCA2-206ENST00000638573 H3BRN7 92 aa12.12□□□□□ -0.47
COLCA2-206ENST00000638573 GALR1P47211 349 aa12.12□□□□□ -0.47
COLCA2-206ENST00000638573 RPL29P47914 159 aaKnown RBP12.12□□□□□ -0.47
COLCA2-206ENST00000638573 B2MP61769 119 aa12.12□□□□□ -0.47
COLCA2-206ENST00000638573 OR1L4Q8NGR5 311 aa12.12□□□□□ -0.47
COLCA2-206ENST00000638573 SCGB1C1Q8TD33 95 aa12.12□□□□□ -0.47
COLCA2-206ENST00000638573 PFDN5Q99471 154 aa12.12□□□□□ -0.47
COLCA2-206ENST00000638573 SHANK2-AS3Q9BTD1 123 aa12.12□□□□□ -0.47
COLCA2-206ENST00000638573 WDR61Q9GZS3 305 aaKnown RBP12.12□□□□□ -0.47
COLCA2-206ENST00000638573 PXMP4Q9Y6I8 212 aa12.12□□□□□ -0.47
COLCA2-206ENST00000638573 K7EQG2 157 aa12.11□□□□□ -0.47
COLCA2-206ENST00000638573 SAMD13Q5VXD3 122 aa12.11□□□□□ -0.47
COLCA2-206ENST00000638573 C10orf113Q5VZT2 155 aa12.11□□□□□ -0.47
COLCA2-206ENST00000638573 FAM24BQ8N5W8 94 aa12.11□□□□□ -0.47
COLCA2-206ENST00000638573 CHAC2Q8WUX2 184 aa12.11□□□□□ -0.47
COLCA2-206ENST00000638573 AQP10Q96PS8 301 aa12.11□□□□□ -0.47
COLCA2-206ENST00000638573 UHRF2Q96PU4 802 aa12.11□□□□□ -0.47
COLCA2-206ENST00000638573 SCRT1Q9BWW7 348 aa12.11□□□□□ -0.47
COLCA2-206ENST00000638573 MAP6D1Q9H9H5 199 aa12.11□□□□□ -0.47
COLCA2-206ENST00000638573 SLC39A9Q9NUM3 307 aa12.11□□□□□ -0.47
COLCA2-206ENST00000638573 A0A0J9YWU9 116 aa12.1□□□□□ -0.47
COLCA2-206ENST00000638573 RPL7P18124 248 aaKnown RBP12.1□□□□□ -0.47
COLCA2-206ENST00000638573 SNRPD3P62318 126 aaKnown RBP12.1□□□□□ -0.47
COLCA2-206ENST00000638573 PRR20EP86478 221 aa12.1□□□□□ -0.47
COLCA2-206ENST00000638573 PRR20CP86479 221 aa12.1□□□□□ -0.47
COLCA2-206ENST00000638573 PRR20DP86480 221 aa12.1□□□□□ -0.47
COLCA2-206ENST00000638573 PRR20BP86481 221 aa12.1□□□□□ -0.47
COLCA2-206ENST00000638573 PRR20AP86496 221 aa12.1□□□□□ -0.47
COLCA2-206ENST00000638573 LINC00305Q7Z4B0 112 aa12.1□□□□□ -0.47
COLCA2-206ENST00000638573 DCANP1Q8TF63 244 aa12.1□□□□□ -0.47
COLCA2-206ENST00000638573 SLC25A32Q9H2D1 315 aa12.1□□□□□ -0.47
COLCA2-206ENST00000638573 ZNF688P0C7X2 276 aa12.09□□□□□ -0.47
COLCA2-206ENST00000638573 ATF4P18848 351 aaPredicted RBP12.09□□□□□ -0.47
COLCA2-206ENST00000638573 MEOX2P50222 304 aa12.09□□□□□ -0.47
COLCA2-206ENST00000638573 DEFB131AP59861 70 aa12.09□□□□□ -0.47
COLCA2-206ENST00000638573 PMS2P11Q13670 270 aa12.09□□□□□ -0.47
COLCA2-206ENST00000638573 ZNF266Q14584 549 aa12.09□□□□□ -0.47
COLCA2-206ENST00000638573 Q5BKY6 102 aa12.09□□□□□ -0.47
COLCA2-206ENST00000638573 LEMD1Q68G75 181 aa12.09□□□□□ -0.47
COLCA2-206ENST00000638573 DNAJC4Q9NNZ3 241 aa12.09□□□□□ -0.47
COLCA2-206ENST00000638573 ID1P41134 155 aa12.08□□□□□ -0.48
COLCA2-206ENST00000638573 PATE2Q6UY27 113 aa12.08□□□□□ -0.48
COLCA2-206ENST00000638573 SEPSECSQ9HD40 501 aaKnown RBP12.08□□□□□ -0.48
COLCA2-206ENST00000638573 PSMG4Q5JS54 123 aa12.07□□□□□ -0.48
COLCA2-206ENST00000638573 GATAD1Q8WUU5 269 aa12.07□□□□□ -0.48
COLCA2-206ENST00000638573 TMEM37Q8WXS4 190 aa12.07□□□□□ -0.48
COLCA2-206ENST00000638573 RSG1Q9BU20 258 aa12.07□□□□□ -0.48
COLCA2-206ENST00000638573 PARD6GQ9BYG4 376 aaPredicted RBP12.07□□□□□ -0.48
COLCA2-206ENST00000638573 TNFSF18Q9UNG2 199 aa12.07□□□□□ -0.48
COLCA2-206ENST00000638573 SPRY2O43597 315 aa12.06□□□□□ -0.48
COLCA2-206ENST00000638573 PSMB3P49720 205 aa12.06□□□□□ -0.48
COLCA2-206ENST00000638573 Q6ZNX1 250 aa12.06□□□□□ -0.48
COLCA2-206ENST00000638573 BPIFA4PQ86YQ2 179 aa12.06□□□□□ -0.48
COLCA2-206ENST00000638573 IL17DQ8TAD2 202 aa12.06□□□□□ -0.48
COLCA2-206ENST00000638573 C16orf92Q96LL3 132 aa12.06□□□□□ -0.48
COLCA2-206ENST00000638573 ARPC5O15511 151 aa12.05□□□□□ -0.48
COLCA2-206ENST00000638573 APOC4P55056 127 aa12.05□□□□□ -0.48
COLCA2-206ENST00000638573 STHQ8IWL8 128 aa12.05□□□□□ -0.48
COLCA2-206ENST00000638573 WFDC1Q9HC57 220 aa12.05□□□□□ -0.48
COLCA2-206ENST00000638573 RNF222A6NCQ9 220 aa12.04□□□□□ -0.48
COLCA2-206ENST00000638573 SMLR1H3BR10 107 aa12.04□□□□□ -0.48
COLCA2-206ENST00000638573 ISLRO14498 428 aa12.04□□□□□ -0.48
COLCA2-206ENST00000638573 FFAR4Q5NUL3 377 aa12.04□□□□□ -0.48
COLCA2-206ENST00000638573 LRRC20Q8TCA0 184 aa12.04□□□□□ -0.48
COLCA2-206ENST00000638573 RNF183Q96D59 192 aa12.04□□□□□ -0.48
COLCA2-206ENST00000638573 LINC00052Q96N35 136 aa12.04□□□□□ -0.48
COLCA2-206ENST00000638573 BORCS7-ASMTA0A0B4J1R7 106 aa12.03□□□□□ -0.48
COLCA2-206ENST00000638573 G3V3Q6 166 aa12.03□□□□□ -0.48
COLCA2-206ENST00000638573 FAM78BQ5VT40 261 aa12.03□□□□□ -0.48
COLCA2-206ENST00000638573 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.03□□□□□ -0.48
COLCA2-206ENST00000638573 Q6ZWC4 215 aa12.03□□□□□ -0.48
COLCA2-206ENST00000638573 MRPL32Q9BYC8 188 aaKnown RBP12.03□□□□□ -0.48
COLCA2-206ENST00000638573 MFFQ9GZY8 342 aa12.03□□□□□ -0.48
COLCA2-206ENST00000638573 TIMM9Q9Y5J7 89 aa12.03□□□□□ -0.48
COLCA2-206ENST00000638573 hCG_2014768A0A024R1R8 64 aa12.02□□□□□ -0.49
COLCA2-206ENST00000638573 A0A087X0K7 114 aa12.02□□□□□ -0.49
COLCA2-206ENST00000638573 KIR2DL5BA0A0G2JN68 375 aa12.02□□□□□ -0.49
COLCA2-206ENST00000638573 KIR2DL5BA0A0G2JPC4 375 aa12.02□□□□□ -0.49
COLCA2-206ENST00000638573 CXorf65A6NEN9 183 aa12.02□□□□□ -0.49
COLCA2-206ENST00000638573 SOCS3O14543 225 aa12.02□□□□□ -0.49
COLCA2-206ENST00000638573 GCSAMLQ5JQS6 135 aa12.02□□□□□ -0.49
COLCA2-206ENST00000638573 MORN5Q5VZ52 161 aa12.02□□□□□ -0.49
COLCA2-206ENST00000638573 LCN15Q6UWW0 184 aa12.02□□□□□ -0.49
COLCA2-206ENST00000638573 KIR2DL5AQ8N109 375 aa12.02□□□□□ -0.49
COLCA2-206ENST00000638573 HSD17B11Q8NBQ5 300 aa12.02□□□□□ -0.49
COLCA2-206ENST00000638573 KIR2DL5BQ8NHK3 375 aa12.02□□□□□ -0.49
COLCA2-206ENST00000638573 LYSTQ99698 3801 aa12.02□□□□□ -0.49
COLCA2-206ENST00000638573 TAAR5O14804 337 aa12.01□□□□□ -0.49
COLCA2-206ENST00000638573 DEFB4AO15263 64 aa12.01□□□□□ -0.49
COLCA2-206ENST00000638573 CXCL2P19875 107 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms