RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 NCOA6Q14686 2063 aaPredicted RBP4.42□□□□□ -1.7
CHD2-227ENST00000637572 FREM1Q5H8C1 2179 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 CENPVL3A0A0U1RRI6 287 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 TMEM89A2RUT3 159 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 AREGP15514 252 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 CRISP2P16562 243 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 RPL35P42766 123 aaKnown RBP4.42□□□□□ -1.7
CHD2-227ENST00000637572 SSTP61278 116 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 RRN3P1Q2M238 152 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 CENPWQ5EE01 88 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 LDLRAD2Q5SZI1 272 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 SLC25A39Q9BZJ4 359 aaPredicted RBP4.42□□□□□ -1.7
CHD2-227ENST00000637572 KIAA2026Q5HYC2 2103 aa4.42□□□□□ -1.7
CHD2-227ENST00000637572 A0A087WWC5 75 aa4.41□□□□□ -1.7
CHD2-227ENST00000637572 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.41□□□□□ -1.7
CHD2-227ENST00000637572 MFAP2P55001 183 aa4.41□□□□□ -1.7
CHD2-227ENST00000637572 SPRNQ5BIV9 151 aa4.41□□□□□ -1.7
CHD2-227ENST00000637572 C19orf35Q6ZS72 473 aa4.41□□□□□ -1.7
CHD2-227ENST00000637572 ZNF114Q8NC26 417 aa4.41□□□□□ -1.7
CHD2-227ENST00000637572 SFRP2Q96HF1 295 aa4.41□□□□□ -1.7
CHD2-227ENST00000637572 PHLDA3Q9Y5J5 127 aa4.41□□□□□ -1.7
CHD2-227ENST00000637572 FRYLO94915 3013 aa4.41□□□□□ -1.7
CHD2-227ENST00000637572 ZNF98A6NK75 572 aa4.41□□□□□ -1.7
CHD2-227ENST00000637572 NDUFS6O75380 124 aaKnown RBP4.41□□□□□ -1.7
CHD2-227ENST00000637572 TMEM50AO95807 157 aa4.41□□□□□ -1.7
CHD2-227ENST00000637572 APCSP02743 223 aa4.41□□□□□ -1.7
CHD2-227ENST00000637572 CGB3P0DN86 165 aa4.41□□□□□ -1.7
CHD2-227ENST00000637572 CGB7P0DN87 165 aa4.41□□□□□ -1.7
CHD2-227ENST00000637572 GATA2P23769 480 aaPredicted RBP4.41□□□□□ -1.7
CHD2-227ENST00000637572 TMEM37Q8WXS4 190 aa4.41□□□□□ -1.7
CHD2-227ENST00000637572 LY96Q9Y6Y9 160 aa4.41□□□□□ -1.7
CHD2-227ENST00000637572 NDUFA4O00483 81 aa4.41□□□□□ -1.7
CHD2-227ENST00000637572 IL15RAQ13261 267 aa4.41□□□□□ -1.7
CHD2-227ENST00000637572 SMIM12Q96EX1 92 aa4.41□□□□□ -1.7
CHD2-227ENST00000637572 RARRES2Q99969 163 aa4.41□□□□□ -1.7
CHD2-227ENST00000637572 MCRIP2Q9BUT9 160 aaKnown RBP4.41□□□□□ -1.7
CHD2-227ENST00000637572 SIRPDQ9H106 197 aa4.41□□□□□ -1.7
CHD2-227ENST00000637572 S4R3C0 116 aa4.41□□□□□ -1.7
CHD2-227ENST00000637572 MED12LQ86YW9 2145 aa4.41□□□□□ -1.7
CHD2-227ENST00000637572 TNRC6BQ9UPQ9 1833 aaKnown RBP4.41□□□□□ -1.7
CHD2-227ENST00000637572 FABP5P3A8MUU1 101 aa4.4□□□□□ -1.7
CHD2-227ENST00000637572 SNURFLB1AK76 121 aa4.4□□□□□ -1.7
CHD2-227ENST00000637572 C19orf84I3L1E1 186 aa4.4□□□□□ -1.7
CHD2-227ENST00000637572 GYPEP15421 78 aa4.4□□□□□ -1.7
CHD2-227ENST00000637572 BTF3P20290 206 aaKnown RBP4.4□□□□□ -1.7
CHD2-227ENST00000637572 NTF3P20783 257 aa4.4□□□□□ -1.7
CHD2-227ENST00000637572 LMO4P61968 165 aa4.4□□□□□ -1.7
CHD2-227ENST00000637572 SHANK2-AS3Q9BTD1 123 aa4.4□□□□□ -1.7
CHD2-227ENST00000637572 TUBA4BQ9H853 241 aa4.4□□□□□ -1.7
CHD2-227ENST00000637572 KALRNO60229 2985 aa4.4□□□□□ -1.7
CHD2-227ENST00000637572 TRAV21A0A0B4J279 112 aa4.4□□□□□ -1.7
CHD2-227ENST00000637572 H7C1H1 209 aa4.4□□□□□ -1.7
CHD2-227ENST00000637572 ZNF253O75346 499 aa4.4□□□□□ -1.7
CHD2-227ENST00000637572 TCL1AP56279 114 aa4.4□□□□□ -1.7
CHD2-227ENST00000637572 GTSCR1Q86UQ5 136 aa4.4□□□□□ -1.7
CHD2-227ENST00000637572 THAP8Q8NA92 274 aa4.4□□□□□ -1.7
CHD2-227ENST00000637572 IGFBPL1Q8WX77 278 aa4.4□□□□□ -1.7
CHD2-227ENST00000637572 TBX15Q96SF7 602 aa4.4□□□□□ -1.7
CHD2-227ENST00000637572 TMPRSS5Q9H3S3 457 aa4.4□□□□□ -1.7
CHD2-227ENST00000637572 VPS13AQ96RL7 3174 aa4.4□□□□□ -1.71
CHD2-227ENST00000637572 PCP4L1A6NKN8 68 aa4.4□□□□□ -1.71
CHD2-227ENST00000637572 C9JCJ5 164 aa4.4□□□□□ -1.71
CHD2-227ENST00000637572 ASIPP42127 132 aa4.4□□□□□ -1.71
CHD2-227ENST00000637572 PAX9P55771 341 aa4.4□□□□□ -1.71
CHD2-227ENST00000637572 LINC00205P59089 165 aa4.4□□□□□ -1.71
CHD2-227ENST00000637572 MRPL54Q6P161 138 aaKnown RBP4.4□□□□□ -1.71
CHD2-227ENST00000637572 TCF24Q7RTU0 167 aa4.4□□□□□ -1.71
CHD2-227ENST00000637572 RPP25LQ8N5L8 163 aaKnown RBP4.4□□□□□ -1.71
CHD2-227ENST00000637572 KLHDC1Q8N7A1 406 aa4.4□□□□□ -1.71
CHD2-227ENST00000637572 MAPK1IP1LQ8NDC0 245 aa4.4□□□□□ -1.71
CHD2-227ENST00000637572 CFHR4Q92496 578 aa4.4□□□□□ -1.71
CHD2-227ENST00000637572 LINC00477Q96M19 166 aa4.4□□□□□ -1.71
CHD2-227ENST00000637572 OSTCQ9NRP0 149 aa4.4□□□□□ -1.71
CHD2-227ENST00000637572 LINC01619G3V211 115 aa4.4□□□□□ -1.71
CHD2-227ENST00000637572 TNFRSF13BO14836 293 aaPredicted RBP4.4□□□□□ -1.71
CHD2-227ENST00000637572 ZNF207O43670 478 aaKnown RBP4.4□□□□□ -1.71
CHD2-227ENST00000637572 TWIST1Q15672 202 aa4.4□□□□□ -1.71
CHD2-227ENST00000637572 DEFB112Q30KQ8 113 aa4.4□□□□□ -1.71
CHD2-227ENST00000637572 STHQ8IWL8 128 aa4.4□□□□□ -1.71
CHD2-227ENST00000637572 KLHL30-AS1Q8NEE0 82 aa4.4□□□□□ -1.71
CHD2-227ENST00000637572 SDF2L1Q9HCN8 221 aa4.4□□□□□ -1.71
CHD2-227ENST00000637572 ZNRD1Q9P1U0 126 aa4.4□□□□□ -1.71
CHD2-227ENST00000637572 RFNGQ9Y644 331 aa4.4□□□□□ -1.71
CHD2-227ENST00000637572 SPTBN5Q9NRC6 3674 aaKnown RBP4.39□□□□□ -1.71
CHD2-227ENST00000637572 NPIPB6E9PJ23 425 aa4.39□□□□□ -1.71
CHD2-227ENST00000637572 AMBPP02760 352 aa4.39□□□□□ -1.71
CHD2-227ENST00000637572 RPL15P61313 204 aaKnown RBP4.39□□□□□ -1.71
CHD2-227ENST00000637572 WT1-ASQ06250 92 aa4.39□□□□□ -1.71
CHD2-227ENST00000637572 DGAT2L7PQ6IED9 249 aa4.39□□□□□ -1.71
CHD2-227ENST00000637572 ZNF841Q6ZN19 808 aa4.39□□□□□ -1.71
CHD2-227ENST00000637572 C1QTNF4Q9BXJ3 329 aa4.39□□□□□ -1.71
CHD2-227ENST00000637572 LINC00527Q9UJ94 153 aa4.39□□□□□ -1.71
CHD2-227ENST00000637572 IGHV3OR16-13A0A075B7E8 117 aa4.39□□□□□ -1.71
CHD2-227ENST00000637572 IGHV3-74A0A0B4J1X5 117 aa4.39□□□□□ -1.71
CHD2-227ENST00000637572 OVOL3O00110 214 aa4.39□□□□□ -1.71
CHD2-227ENST00000637572 SPINK4O60575 86 aa4.39□□□□□ -1.71
CHD2-227ENST00000637572 NDUFA3O95167 84 aa4.39□□□□□ -1.71
CHD2-227ENST00000637572 PMCHP20382 165 aa4.39□□□□□ -1.71
CHD2-227ENST00000637572 IER3P46695 156 aa4.39□□□□□ -1.71
CHD2-227ENST00000637572 FOXE3Q13461 319 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms