RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 CLEC3BP05452 202 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 ADMP35318 185 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 MEOX2P50222 304 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 AKR1D1P51857 326 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 UBE2G1P62253 170 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 RHOGP84095 191 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 ATP5G2Q06055 141 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 C15orf32Q32M92 178 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 IBA57Q5T440 356 aaKnown RBP4.33□□□□□ -1.72
NEK3-211ENST00000629912 RASL11AQ6T310 242 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 TOMM20LQ6UXN7 152 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 BRD3OSQ6XYD6 125 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 FAM223AQ8IWN6 122 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 NUDT10Q8NFP7 164 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 EEF1AKMT3Q96AZ1 226 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 NUDT11Q96G61 164 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 GRAMD2BQ96HH9 432 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 GNB1LQ9BYB4 327 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 PRSS22Q9GZN4 317 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 RNASE7Q9H1E1 156 aaKnown RBP4.33□□□□□ -1.72
NEK3-211ENST00000629912 HIF1ANQ9NWT6 349 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 RABAC1Q9UI14 185 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 ZFP30Q9Y2G7 519 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 TRAPPC1Q9Y5R8 145 aa4.33□□□□□ -1.72
NEK3-211ENST00000629912 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.33□□□□□ -1.724e-9■■■□□ 19
NEK3-211ENST00000629912 UBR5O95071 2799 aaPredicted RBP4.32□□□□□ -1.72
NEK3-211ENST00000629912 MYO18BQ8IUG5 2567 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 SERTM2A0A1B0GWG4 89 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 C19orf71A6NCJ1 209 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 FAM231BA6NCW3 169 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 IZUMO1RA6ND01 250 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 OR2T8A6NH00 312 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 IFITM10A6NMD0 228 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 K7EQM0 130 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 BMPR1BO00238 502 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 IGLV2-11P01706 119 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 MGST1P10620 155 aaKnown RBP4.32□□□□□ -1.72
NEK3-211ENST00000629912 RPL7P18124 248 aaKnown RBP4.32□□□□□ -1.72
NEK3-211ENST00000629912 PPIFP30405 207 aaKnown RBP4.32□□□□□ -1.72
NEK3-211ENST00000629912 GNG5P63218 68 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 PSG9Q00887 426 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 ECSCRQ19T08 205 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 CT83Q5H943 113 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 C1orf194Q5T5A4 169 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 WDR73Q6P4I2 378 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 PRSS57Q6UWY2 283 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 SIGLEC15Q6ZMC9 328 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 TMEM219Q86XT9 240 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 TMEM183AQ8IXX5 376 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 BCL6BQ8N143 479 aaPredicted RBP4.32□□□□□ -1.72
NEK3-211ENST00000629912 HIST3H2BBQ8N257 126 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 TMEM75Q8N9X5 138 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 CMTM2Q8TAZ6 248 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 WIPF2Q8TF74 440 aaPredicted RBP4.32□□□□□ -1.72
NEK3-211ENST00000629912 NRGNQ92686 78 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 USMG5Q96IX5 58 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 C17orf77Q96MU5 243 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 ZFAND3Q9H8U3 227 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 SMAD5-AS1Q9Y6J3 95 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 S4R3C0 116 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 U3KQE9 123 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 ZNF462Q96JM2 2506 aa4.32□□□□□ -1.72
NEK3-211ENST00000629912 ASH1LQ9NR48 2969 aaKnown RBP4.31□□□□□ -1.72
NEK3-211ENST00000629912 A0A087X0K7 114 aa4.31□□□□□ -1.72
NEK3-211ENST00000629912 ZNF705GA8MUZ8 300 aaPredicted RBP4.31□□□□□ -1.72
NEK3-211ENST00000629912 A8MWL6 223 aa4.31□□□□□ -1.72
NEK3-211ENST00000629912 DIRC3C9JPN6 131 aa4.31□□□□□ -1.72
NEK3-211ENST00000629912 NPIPB6E9PJ23 425 aa4.31□□□□□ -1.72
NEK3-211ENST00000629912 H3BTX0 84 aa4.31□□□□□ -1.72
NEK3-211ENST00000629912 H3BUX3 64 aa4.31□□□□□ -1.72
NEK3-211ENST00000629912 BUB3O43684 328 aa4.31□□□□□ -1.72
NEK3-211ENST00000629912 FSHBP01225 129 aa4.31□□□□□ -1.72
NEK3-211ENST00000629912 IGHV3-23P01764 117 aa4.31□□□□□ -1.72
NEK3-211ENST00000629912 MT-ND6P03923 174 aa4.31□□□□□ -1.72
NEK3-211ENST00000629912 SNRPCP09234 159 aaKnown RBP4.31□□□□□ -1.72
NEK3-211ENST00000629912 SMIM6P0DI80 62 aa4.31□□□□□ -1.72
NEK3-211ENST00000629912 FOXA3P55318 350 aaPredicted RBP4.31□□□□□ -1.72
NEK3-211ENST00000629912 RELQ04864 619 aaPredicted RBP4.31□□□□□ -1.72
NEK3-211ENST00000629912 DEFB113Q30KQ7 82 aa4.31□□□□□ -1.72
NEK3-211ENST00000629912 DNLZQ5SXM8 178 aa4.31□□□□□ -1.72
NEK3-211ENST00000629912 C16orf54Q6UWD8 224 aa4.31□□□□□ -1.72
NEK3-211ENST00000629912 C9orf139Q6ZV77 190 aa4.31□□□□□ -1.72
NEK3-211ENST00000629912 COX8CQ7Z4L0 72 aa4.31□□□□□ -1.72
NEK3-211ENST00000629912 OR8I2Q8N0Y5 310 aa4.31□□□□□ -1.72
NEK3-211ENST00000629912 EXOC3-AS1Q8N2X6 119 aa4.31□□□□□ -1.72
NEK3-211ENST00000629912 TSKUQ8WUA8 353 aa4.31□□□□□ -1.72
NEK3-211ENST00000629912 CCDC140Q96MF4 163 aa4.31□□□□□ -1.72
NEK3-211ENST00000629912 C12orf57Q99622 126 aa4.31□□□□□ -1.72
NEK3-211ENST00000629912 GFRA4Q9GZZ7 299 aa4.31□□□□□ -1.72
NEK3-211ENST00000629912 PRDM13Q9H4Q3 707 aa4.31□□□□□ -1.72
NEK3-211ENST00000629912 AAMDCQ9H7C9 122 aa4.31□□□□□ -1.72
NEK3-211ENST00000629912 SERTAD4Q9NUC0 356 aa4.31□□□□□ -1.72
NEK3-211ENST00000629912 SOX21Q9Y651 276 aaPredicted RBP4.31□□□□□ -1.72
NEK3-211ENST00000629912 PRRC2AP48634 2157 aaKnown RBP4.3□□□□□ -1.72
NEK3-211ENST00000629912 CR1P17927 2039 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.3□□□□□ -1.72
NEK3-211ENST00000629912 A1L4Q6 167 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 XKRY2A2RUG3 117 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 TMEM89A2RUT3 159 aa4.3□□□□□ -1.72
NEK3-211ENST00000629912 CLPSL1A2RUU4 121 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms