RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 TCRBP04435 133 aa12.33□□□□□ -0.44
HMGN3-203ENST00000620514 LINC00869P0C866 280 aa12.33□□□□□ -0.44
HMGN3-203ENST00000620514 ZNF705DP0CH99 300 aaPredicted RBP12.33□□□□□ -0.44
HMGN3-203ENST00000620514 ZNF705BP0CI00 300 aaPredicted RBP12.33□□□□□ -0.44
HMGN3-203ENST00000620514 PRR20EP86478 221 aa12.33□□□□□ -0.44
HMGN3-203ENST00000620514 PRR20CP86479 221 aa12.33□□□□□ -0.44
HMGN3-203ENST00000620514 PRR20DP86480 221 aa12.33□□□□□ -0.44
HMGN3-203ENST00000620514 PRR20BP86481 221 aa12.33□□□□□ -0.44
HMGN3-203ENST00000620514 PRR20AP86496 221 aa12.33□□□□□ -0.44
HMGN3-203ENST00000620514 PSG9Q00887 426 aa12.33□□□□□ -0.44
HMGN3-203ENST00000620514 EBLN2Q6P2I7 272 aa12.33□□□□□ -0.44
HMGN3-203ENST00000620514 OR10P1Q8NGE3 313 aa12.33□□□□□ -0.44
HMGN3-203ENST00000620514 SEC22CQ9BRL7 303 aa12.33□□□□□ -0.44
HMGN3-203ENST00000620514 SHANK2-AS3Q9BTD1 123 aa12.33□□□□□ -0.44
HMGN3-203ENST00000620514 RPRMQ9NS64 109 aa12.33□□□□□ -0.44
HMGN3-203ENST00000620514 TRAV8-2A0A0B4J237 113 aa12.32□□□□□ -0.44
HMGN3-203ENST00000620514 HYPMO75409 117 aa12.32□□□□□ -0.44
HMGN3-203ENST00000620514 TAS2R30P59541 319 aa12.32□□□□□ -0.44
HMGN3-203ENST00000620514 PLP1P60201 277 aa12.32□□□□□ -0.44
HMGN3-203ENST00000620514 SLC38A11Q08AI6 406 aa12.32□□□□□ -0.44
HMGN3-203ENST00000620514 SAMD13Q5VXD3 122 aa12.32□□□□□ -0.44
HMGN3-203ENST00000620514 SPATA31B1PQ5VZV4 182 aa12.32□□□□□ -0.44
HMGN3-203ENST00000620514 UHRF2Q96PU4 802 aa12.32□□□□□ -0.44
HMGN3-203ENST00000620514 NEU1Q99519 415 aa12.32□□□□□ -0.44
HMGN3-203ENST00000620514 NPVFQ9HCQ7 196 aa12.32□□□□□ -0.44
HMGN3-203ENST00000620514 HIGD1AQ9Y241 93 aa12.32□□□□□ -0.44
HMGN3-203ENST00000620514 C7orf66A4D0T2 115 aa12.31□□□□□ -0.44
HMGN3-203ENST00000620514 OR5G3P0C626 314 aa12.31□□□□□ -0.44
HMGN3-203ENST00000620514 EMP1P54849 157 aa12.31□□□□□ -0.44
HMGN3-203ENST00000620514 TCTAP57738 103 aa12.31□□□□□ -0.44
HMGN3-203ENST00000620514 RAP2BP61225 183 aa12.31□□□□□ -0.44
HMGN3-203ENST00000620514 FGL1Q08830 312 aa12.31□□□□□ -0.44
HMGN3-203ENST00000620514 PATE2Q6UY27 113 aa12.31□□□□□ -0.44
HMGN3-203ENST00000620514 C1orf158Q8N1D5 194 aa12.31□□□□□ -0.44
HMGN3-203ENST00000620514 RNF182Q8N6D2 247 aa12.31□□□□□ -0.44
HMGN3-203ENST00000620514 GPR82Q96P67 336 aa12.31□□□□□ -0.44
HMGN3-203ENST00000620514 NUDT15Q9NV35 164 aa12.31□□□□□ -0.44
HMGN3-203ENST00000620514 MGAT4CQ9UBM8 478 aa12.31□□□□□ -0.44
HMGN3-203ENST00000620514 IGHV4-4A0A075B6R2 117 aa12.3□□□□□ -0.44
HMGN3-203ENST00000620514 A8MTW9 85 aa12.3□□□□□ -0.44
HMGN3-203ENST00000620514 FAM25EA8MYX2 175 aa12.3□□□□□ -0.44
HMGN3-203ENST00000620514 FNDC10F2Z333 226 aa12.3□□□□□ -0.44
HMGN3-203ENST00000620514 S100A7P31151 101 aa12.3□□□□□ -0.44
HMGN3-203ENST00000620514 SELENOTP62341 195 aa12.3□□□□□ -0.44
HMGN3-203ENST00000620514 TEPPQ6URK8 271 aa12.3□□□□□ -0.44
HMGN3-203ENST00000620514 AMTNQ6UX39 209 aa12.3□□□□□ -0.44
HMGN3-203ENST00000620514 ZNF431Q8TF32 576 aaPredicted RBP12.3□□□□□ -0.44
HMGN3-203ENST00000620514 ARL6Q9H0F7 186 aa12.3□□□□□ -0.44
HMGN3-203ENST00000620514 LSM5Q9Y4Y9 91 aaKnown RBP12.3□□□□□ -0.44
HMGN3-203ENST00000620514 DNAH10Q8IVF4 4471 aa12.3□□□□□ -0.44
HMGN3-203ENST00000620514 DEFB131BA0A096LNP1 70 aa12.29□□□□□ -0.44
HMGN3-203ENST00000620514 SMIM9A6NGZ8 99 aa12.29□□□□□ -0.44
HMGN3-203ENST00000620514 K7EPK0 472 aa12.29□□□□□ -0.44
HMGN3-203ENST00000620514 ZNF846Q147U1 533 aa12.29□□□□□ -0.44
HMGN3-203ENST00000620514 CCDC32Q9BV29 185 aa12.29□□□□□ -0.44
HMGN3-203ENST00000620514 C5orf51A6NDU8 294 aa12.28□□□□□ -0.44
HMGN3-203ENST00000620514 L7N2F9 121 aa12.28□□□□□ -0.44
HMGN3-203ENST00000620514 H2AFB2P0C5Z0 115 aa12.28□□□□□ -0.44
HMGN3-203ENST00000620514 PRB4P10163 310 aaPredicted RBP12.28□□□□□ -0.44
HMGN3-203ENST00000620514 RPL7P18124 248 aaKnown RBP12.28□□□□□ -0.44
HMGN3-203ENST00000620514 CNN1P51911 297 aaKnown RBP12.28□□□□□ -0.44
HMGN3-203ENST00000620514 VAMP2P63027 116 aa12.28□□□□□ -0.44
HMGN3-203ENST00000620514 C12orf45Q8N5I9 185 aaPredicted RBP12.28□□□□□ -0.44
HMGN3-203ENST00000620514 ARV1Q9H2C2 271 aa12.28□□□□□ -0.44
HMGN3-203ENST00000620514 GOLT1BQ9Y3E0 138 aa12.28□□□□□ -0.44
HMGN3-203ENST00000620514 RFNGQ9Y644 331 aa12.28□□□□□ -0.44
HMGN3-203ENST00000620514 AGPAT2O15120 278 aa12.27□□□□□ -0.45
HMGN3-203ENST00000620514 SPART-AS1P0CW21 52 aa12.27□□□□□ -0.45
HMGN3-203ENST00000620514 ZNF738Q8NE65 137 aa12.27□□□□□ -0.45
HMGN3-203ENST00000620514 OR11H7Q8NGC8 314 aa12.27□□□□□ -0.45
HMGN3-203ENST00000620514 MGST2Q99735 147 aa12.27□□□□□ -0.45
HMGN3-203ENST00000620514 RNF126Q9BV68 326 aa12.27□□□□□ -0.45
HMGN3-203ENST00000620514 GGACTQ9BVM4 153 aa12.27□□□□□ -0.45
HMGN3-203ENST00000620514 C11orf1Q9H5F2 150 aa12.27□□□□□ -0.45
HMGN3-203ENST00000620514 PLA2G2EQ9NZK7 142 aa12.27□□□□□ -0.45
HMGN3-203ENST00000620514 FRAS1Q86XX4 4008 aa12.27□□□□□ -0.45
HMGN3-203ENST00000620514 DNAH6Q9C0G6 4158 aa12.26□□□□□ -0.45
HMGN3-203ENST00000620514 TMEM189A5PLL7 270 aa12.26□□□□□ -0.45
HMGN3-203ENST00000620514 FAM24AA6NFZ4 105 aa12.26□□□□□ -0.45
HMGN3-203ENST00000620514 M0R2Z0 102 aa12.26□□□□□ -0.45
HMGN3-203ENST00000620514 GOSR2O14653 212 aa12.26□□□□□ -0.45
HMGN3-203ENST00000620514 MRPS12O15235 138 aaKnown RBP12.26□□□□□ -0.45
HMGN3-203ENST00000620514 BCAP31P51572 246 aa12.26□□□□□ -0.45
HMGN3-203ENST00000620514 SPINK13Q1W4C9 94 aa12.26□□□□□ -0.45
HMGN3-203ENST00000620514 ZNF546Q86UE3 836 aa12.26□□□□□ -0.45
HMGN3-203ENST00000620514 C2orf50Q96LR7 162 aa12.26□□□□□ -0.45
HMGN3-203ENST00000620514 IGF2BP2-AS1Q96M15 143 aa12.26□□□□□ -0.45
HMGN3-203ENST00000620514 DKK2Q9UBU2 259 aa12.26□□□□□ -0.45
HMGN3-203ENST00000620514 A0A087X0K7 114 aa12.25□□□□□ -0.45
HMGN3-203ENST00000620514 LOC102723971A0A1B0GUV8 181 aa12.25□□□□□ -0.45
HMGN3-203ENST00000620514 FAM240BA0A1B0GVZ2 78 aa12.25□□□□□ -0.45
HMGN3-203ENST00000620514 CST7O76096 145 aa12.25□□□□□ -0.45
HMGN3-203ENST00000620514 DUSP14O95147 198 aaKnown RBP12.25□□□□□ -0.45
HMGN3-203ENST00000620514 HBE1P02100 147 aa12.25□□□□□ -0.45
HMGN3-203ENST00000620514 AMBPP02760 352 aa12.25□□□□□ -0.45
HMGN3-203ENST00000620514 SNRPCP09234 159 aaKnown RBP12.25□□□□□ -0.45
HMGN3-203ENST00000620514 CXCL3P19876 107 aa12.25□□□□□ -0.45
HMGN3-203ENST00000620514 CAV2P51636 162 aa12.25□□□□□ -0.45
HMGN3-203ENST00000620514 FAM222AQ5U5X8 452 aa12.25□□□□□ -0.45
HMGN3-203ENST00000620514 CRXO43186 299 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms