RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 PAXXQ9BUH6 204 aa13.75□□□□□ -0.21
CNOT3-209ENST00000617930 GNB1LQ9BYB4 327 aa13.75□□□□□ -0.21
CNOT3-209ENST00000617930 SPINK4O60575 86 aa13.74□□□□□ -0.21
CNOT3-209ENST00000617930 TTC9CQ8N5M4 171 aa13.74□□□□□ -0.21
CNOT3-209ENST00000617930 NAT8BQ9UHF3 227 aa13.74□□□□□ -0.21
CNOT3-209ENST00000617930 SH2D7A6NKC9 451 aaPredicted RBP13.74□□□□□ -0.21
CNOT3-209ENST00000617930 LINC01548A6NM66 108 aa13.74□□□□□ -0.21
CNOT3-209ENST00000617930 NPIPB5A8MRT5 1133 aa13.74□□□□□ -0.21
CNOT3-209ENST00000617930 AVPP01185 164 aa13.74□□□□□ -0.21
CNOT3-209ENST00000617930 MT-ND6P03923 174 aa13.74□□□□□ -0.21
CNOT3-209ENST00000617930 FAM106CPP0CH98 169 aa13.74□□□□□ -0.21
CNOT3-209ENST00000617930 ESDP10768 282 aa13.74□□□□□ -0.21
CNOT3-209ENST00000617930 BPIFB3P59826 476 aa13.74□□□□□ -0.21
CNOT3-209ENST00000617930 IBA57Q5T440 356 aaKnown RBP13.74□□□□□ -0.21
CNOT3-209ENST00000617930 C1orf194Q5T5A4 169 aa13.74□□□□□ -0.21
CNOT3-209ENST00000617930 TOMM20LQ6UXN7 152 aa13.74□□□□□ -0.21
CNOT3-209ENST00000617930 C22orf15Q8WYQ4 148 aa13.74□□□□□ -0.21
CNOT3-209ENST00000617930 LINC00479Q96M42 142 aa13.74□□□□□ -0.21
CNOT3-209ENST00000617930 SAMD10Q9BYL1 202 aa13.74□□□□□ -0.21
CNOT3-209ENST00000617930 SERTAD4Q9NUC0 356 aa13.74□□□□□ -0.21
CNOT3-209ENST00000617930 AKAP9Q99996 3911 aa13.73□□□□□ -0.21
CNOT3-209ENST00000617930 PRRC2AP48634 2157 aaKnown RBP13.73□□□□□ -0.21
CNOT3-209ENST00000617930 KIR2DL5BA0A0G2JN68 375 aa13.73□□□□□ -0.21
CNOT3-209ENST00000617930 KIR2DL5BA0A0G2JPC4 375 aa13.73□□□□□ -0.21
CNOT3-209ENST00000617930 ISLRO14498 428 aa13.73□□□□□ -0.21
CNOT3-209ENST00000617930 FRMD6-AS1P0C7T7 363 aa13.73□□□□□ -0.21
CNOT3-209ENST00000617930 TCL1AP56279 114 aa13.73□□□□□ -0.21
CNOT3-209ENST00000617930 DSCR9P59020 149 aa13.73□□□□□ -0.21
CNOT3-209ENST00000617930 LINC00310P59036 64 aa13.73□□□□□ -0.21
CNOT3-209ENST00000617930 KIR2DL5AQ8N109 375 aa13.73□□□□□ -0.21
CNOT3-209ENST00000617930 BCL6BQ8N143 479 aaPredicted RBP13.73□□□□□ -0.21
CNOT3-209ENST00000617930 IGF2BP2-AS1Q96M15 143 aa13.73□□□□□ -0.21
CNOT3-209ENST00000617930 BEX4Q9NWD9 120 aaPredicted RBP13.73□□□□□ -0.21
CNOT3-209ENST00000617930 HECTD1Q9ULT8 2610 aa13.73□□□□□ -0.21
CNOT3-209ENST00000617930 HYPMO75409 117 aa13.73□□□□□ -0.21
CNOT3-209ENST00000617930 SLC25A16P16260 332 aa13.73□□□□□ -0.21
CNOT3-209ENST00000617930 MYCNOSP40205 109 aa13.73□□□□□ -0.21
CNOT3-209ENST00000617930 Q0VG73 95 aa13.73□□□□□ -0.21
CNOT3-209ENST00000617930 COX19Q49B96 90 aa13.73□□□□□ -0.21
CNOT3-209ENST00000617930 BRD3OSQ6XYD6 125 aa13.73□□□□□ -0.21
CNOT3-209ENST00000617930 Q6ZWC4 215 aa13.73□□□□□ -0.21
CNOT3-209ENST00000617930 PIFOQ8TCI5 191 aa13.73□□□□□ -0.21
CNOT3-209ENST00000617930 RBM14Q96PK6 669 aaKnown RBP13.73□□□□□ -0.21
CNOT3-209ENST00000617930 MSMBP08118 114 aa13.72□□□□□ -0.21
CNOT3-209ENST00000617930 Q5PR19 223 aa13.72□□□□□ -0.21
CNOT3-209ENST00000617930 RNF223E7ERA6 249 aa13.71□□□□□ -0.21
CNOT3-209ENST00000617930 F2Z2F3 143 aa13.71□□□□□ -0.21
CNOT3-209ENST00000617930 EREGO14944 169 aa13.71□□□□□ -0.21
CNOT3-209ENST00000617930 NDUFB8O95169 186 aa13.71□□□□□ -0.21
CNOT3-209ENST00000617930 IGLV2-8P01709 118 aa13.71□□□□□ -0.21
CNOT3-209ENST00000617930 AMY1AP04745 511 aa13.71□□□□□ -0.21
CNOT3-209ENST00000617930 GP9P14770 177 aa13.71□□□□□ -0.21
CNOT3-209ENST00000617930 SLC35B1P78383 322 aa13.71□□□□□ -0.21
CNOT3-209ENST00000617930 ZNF329Q86UD4 541 aa13.71□□□□□ -0.21
CNOT3-209ENST00000617930 MRPL27Q9P0M9 148 aaKnown RBP13.71□□□□□ -0.21
CNOT3-209ENST00000617930 H3BTX0 84 aa13.71□□□□□ -0.22
CNOT3-209ENST00000617930 HLA-DRB1P01911 266 aa13.71□□□□□ -0.22
CNOT3-209ENST00000617930 IGHV4-38-2P0DP08 117 aa13.71□□□□□ -0.22
CNOT3-209ENST00000617930 LYZP61626 148 aa13.71□□□□□ -0.22
CNOT3-209ENST00000617930 RASL11BQ9BPW5 248 aa13.71□□□□□ -0.22
CNOT3-209ENST00000617930 IGHV3-23P01764 117 aa13.7□□□□□ -0.22
CNOT3-209ENST00000617930 MRPL54Q6P161 138 aaKnown RBP13.7□□□□□ -0.22
CNOT3-209ENST00000617930 TMEM136Q6ZRR5 245 aa13.7□□□□□ -0.22
CNOT3-209ENST00000617930 LRRC75A-AS1Q8N1F1 130 aa13.7□□□□□ -0.22
CNOT3-209ENST00000617930 NHLRC2Q8NBF2 726 aa13.7□□□□□ -0.22
CNOT3-209ENST00000617930 CCDC168Q8NDH2 2452 aa13.7□□□□□ -0.22
CNOT3-209ENST00000617930 ITPR3Q14573 2671 aa13.7□□□□□ -0.22
CNOT3-209ENST00000617930 TRAV40A0A0B4J280 105 aa13.69□□□□□ -0.22
CNOT3-209ENST00000617930 IGHV1-69DA0A0B4J2H0 117 aa13.69□□□□□ -0.22
CNOT3-209ENST00000617930 IGHV1-69P01742 117 aa13.69□□□□□ -0.22
CNOT3-209ENST00000617930 CD33P20138 364 aa13.69□□□□□ -0.22
CNOT3-209ENST00000617930 BRS3P32247 399 aa13.69□□□□□ -0.22
CNOT3-209ENST00000617930 ZNF491Q8N8L2 437 aa13.69□□□□□ -0.22
CNOT3-209ENST00000617930 ZNF414Q96IQ9 312 aa13.69□□□□□ -0.22
CNOT3-209ENST00000617930 SLC25A39Q9BZJ4 359 aaPredicted RBP13.69□□□□□ -0.22
CNOT3-209ENST00000617930 GNB4Q9HAV0 340 aa13.69□□□□□ -0.22
CNOT3-209ENST00000617930 HIF1ANQ9NWT6 349 aa13.69□□□□□ -0.22
CNOT3-209ENST00000617930 CDC42EP3Q9UKI2 254 aa13.69□□□□□ -0.22
CNOT3-209ENST00000617930 SMIM27A0A1W2PRY6 76 aa13.69□□□□□ -0.22
CNOT3-209ENST00000617930 OR2J3O76001 311 aa13.69□□□□□ -0.22
CNOT3-209ENST00000617930 TMEM219Q86XT9 240 aa13.69□□□□□ -0.22
CNOT3-209ENST00000617930 SIGLECL1Q8N7X8 197 aa13.69□□□□□ -0.22
CNOT3-209ENST00000617930 BLNKQ8WV28 456 aa13.69□□□□□ -0.22
CNOT3-209ENST00000617930 CSPG4Q6UVK1 2322 aa13.68□□□□□ -0.22
CNOT3-209ENST00000617930 ATP6V0E1O15342 81 aa13.68□□□□□ -0.22
CNOT3-209ENST00000617930 HLA-DQA1P01909 254 aa13.68□□□□□ -0.22
CNOT3-209ENST00000617930 GNG5P63218 68 aa13.68□□□□□ -0.22
CNOT3-209ENST00000617930 KIAA1644Q3SXP7 199 aa13.68□□□□□ -0.22
CNOT3-209ENST00000617930 OR10J3Q5JRS4 329 aa13.68□□□□□ -0.22
CNOT3-209ENST00000617930 MBD6Q96DN6 1003 aa13.68□□□□□ -0.22
CNOT3-209ENST00000617930 HIGD1AQ9Y241 93 aa13.68□□□□□ -0.22
CNOT3-209ENST00000617930 IZUMO1RA6ND01 250 aa13.68□□□□□ -0.22
CNOT3-209ENST00000617930 B4DSR2 109 aa13.68□□□□□ -0.22
CNOT3-209ENST00000617930 M0R143 59 aa13.68□□□□□ -0.22
CNOT3-209ENST00000617930 PEX7O00628 323 aa13.68□□□□□ -0.22
CNOT3-209ENST00000617930 NBEAP1P0C6P0 100 aa13.68□□□□□ -0.22
CNOT3-209ENST00000617930 TMEM183BQ1AE95 376 aa13.68□□□□□ -0.22
CNOT3-209ENST00000617930 TEX43Q6ZNM6 134 aa13.68□□□□□ -0.22
CNOT3-209ENST00000617930 Q96MF0 132 aa13.68□□□□□ -0.22
CNOT3-209ENST00000617930 C1RLQ9NZP8 487 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms