RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 COL5A1-AS1Q5SY13 56 aa4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 F11RQ9Y624 299 aaKnown RBP4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 IGHV1-3A0A0C4DH29 117 aa4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 RPL13AP40429 203 aaKnown RBP4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 CDPF1Q6NVV7 123 aa4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 TSKUQ8WUA8 353 aa4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 GNB1LQ9BYB4 327 aa4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 Q9H3A6 140 aa4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 PRSS1P07477 247 aa4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 FAM106CPP0CH98 169 aa4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 COL8A2P25067 703 aa4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 MRPL55Q7Z7F7 128 aaKnown RBP4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 TMEM116Q8NCL8 245 aa4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 TPSG1Q9NRR2 321 aa4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 AMY1AP04745 511 aa4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 CTAG1AP78358 180 aa4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 LCN12Q6JVE5 192 aa4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 RBPMS2Q6ZRY4 209 aaKnown RBP4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 LINC00311Q8N616 119 aa4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 DSCAMO60469 2012 aa4.55□□□□□ -1.68
SYNCRIP-204ENST00000616122 PRTN3P24158 256 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 CR1LQ2VPA4 569 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 PRR31Q5SQ13 230 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 BEND2Q8NDZ0 799 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 C14orf144Q96I85 54 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 MUC21A0A0G2JKD1 596 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 MUC21A0A140T8X8 626 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 RNF224P0DH78 156 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 C5orf64Q2M2E5 130 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 MUC21Q5SSG8 566 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 EXOC3-AS1Q8N2X6 119 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 C11orf42Q8N5U0 333 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 COL12A1Q99715 3063 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 TMEM70Q9BUB7 260 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 CHODLQ9H9P2 273 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 FBXL7Q9UJT9 491 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 RAXQ9Y2V3 346 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 CFAP47Q6ZTR5 3102 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 IZUMO1RA6ND01 250 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 ACTL10Q5JWF8 245 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 CIARTQ8N365 385 aaPredicted RBP4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 RPP21Q9H633 154 aaKnown RBP4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 SCGB1A1P11684 91 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 GPR183P32249 361 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 TRGV9Q99603 122 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 RNF5Q99942 180 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 GOLT1BQ9Y3E0 138 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 IFITM10A6NMD0 228 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 K7ENP7 123 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 BMI1P35226 326 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 C1orf194Q5T5A4 169 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 NEU4Q8WWR8 484 aaPredicted RBP4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 TMEM131Q92545 1883 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 TMEM189A5PLL7 270 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 FCER1GP30273 86 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 IGF2-ASQ6U949 168 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 SPOCK3Q9BQ16 436 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 PSG8Q9UQ74 426 aa4.54□□□□□ -1.68
SYNCRIP-204ENST00000616122 A8MWP6 167 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 IGKV1-17P01599 117 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 CKS2P33552 79 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 C3orf36Q3SXR2 165 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 DNLZQ5SXM8 178 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 C11orf44Q8N8P7 122 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 WFDC11Q8NEX6 87 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 ZFP30Q9Y2G7 519 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 C3orf79P0CE67 100 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 PVRIGQ6DKI7 326 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 C8orf46Q8TAG6 207 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 MRPL36Q9P0J6 103 aaKnown RBP4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 IGLC7A0M8Q6 106 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 OR4C46A6NHA9 309 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 C22orf46C9J442 243 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 PTTG1IPP53801 180 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 TMEM78Q5T7P6 136 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 PMCHL2Q9BQD1 86 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 V9GYV3 84 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 KALRNO60229 2985 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 BUB1B-PAK6H3BSN5 160 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 IGLC1P0CG04 106 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 PF4V1P10720 104 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 TCF15Q12870 199 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 ZNF562Q6V9R5 426 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 ARPC1AQ92747 370 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 TEX15Q9BXT5 2789 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 COL6A3P12111 3177 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 IGLV1-47P01700 117 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 SLC25A34Q6PIV7 304 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 ZNF833PQ6ZTB9 187 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 OR4C5Q8NGB2 326 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 ST6GALNAC6Q969X2 333 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 DPH3Q96FX2 82 aa4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 SOX21Q9Y651 276 aaPredicted RBP4.53□□□□□ -1.68
SYNCRIP-204ENST00000616122 HLA-DRB1P01911 266 aa4.52□□□□□ -1.69
SYNCRIP-204ENST00000616122 THBDP07204 575 aa4.52□□□□□ -1.69
SYNCRIP-204ENST00000616122 SPATA45Q537H7 98 aa4.52□□□□□ -1.69
SYNCRIP-204ENST00000616122 MORN5Q5VZ52 161 aa4.52□□□□□ -1.69
SYNCRIP-204ENST00000616122 FAM71F2Q6NXP2 309 aa4.52□□□□□ -1.69
SYNCRIP-204ENST00000616122 OR8A1Q8NGG7 326 aa4.52□□□□□ -1.69
SYNCRIP-204ENST00000616122 UFC1Q9Y3C8 167 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms