RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 S100A7AQ86SG5 101 aa12.32□□□□□ -0.44
RETREG3-210ENST00000590541 CLUHP3Q96NS8 147 aa12.32□□□□□ -0.44
RETREG3-210ENST00000590541 CCDC32Q9BV29 185 aa12.32□□□□□ -0.44
RETREG3-210ENST00000590541 HLA-DRB4X5D2U9 266 aa12.32□□□□□ -0.44
RETREG3-210ENST00000590541 NACAE9PAV3 2078 aa12.32□□□□□ -0.44
RETREG3-210ENST00000590541 H3BP45 60 aa12.31□□□□□ -0.44
RETREG3-210ENST00000590541 ISLRO14498 428 aa12.31□□□□□ -0.44
RETREG3-210ENST00000590541 PLA2G10O15496 165 aa12.31□□□□□ -0.44
RETREG3-210ENST00000590541 SPART-AS1P0CW21 52 aa12.31□□□□□ -0.44
RETREG3-210ENST00000590541 GALR1P47211 349 aa12.31□□□□□ -0.44
RETREG3-210ENST00000590541 SELENOTP62341 195 aa12.31□□□□□ -0.44
RETREG3-210ENST00000590541 IAH1Q2TAA2 248 aaPredicted RBP12.31□□□□□ -0.44
RETREG3-210ENST00000590541 ACOT7LQ6ZUV0 252 aa12.31□□□□□ -0.44
RETREG3-210ENST00000590541 C20orf85Q9H1P6 137 aa12.31□□□□□ -0.44
RETREG3-210ENST00000590541 XCL2Q9UBD3 114 aa12.31□□□□□ -0.44
RETREG3-210ENST00000590541 SSSCA1O60232 199 aa12.3□□□□□ -0.44
RETREG3-210ENST00000590541 TSC22D2O75157 780 aa12.3□□□□□ -0.44
RETREG3-210ENST00000590541 TCRBP04435 133 aa12.3□□□□□ -0.44
RETREG3-210ENST00000590541 DLK1P80370 383 aa12.3□□□□□ -0.44
RETREG3-210ENST00000590541 FOXI2Q6ZQN5 318 aa12.3□□□□□ -0.44
RETREG3-210ENST00000590541 OR10P1Q8NGE3 313 aa12.3□□□□□ -0.44
RETREG3-210ENST00000590541 OR1B1Q8NGR6 318 aa12.3□□□□□ -0.44
RETREG3-210ENST00000590541 TMEM147Q9BVK8 224 aa12.3□□□□□ -0.44
RETREG3-210ENST00000590541 SCRT2Q9NQ03 307 aa12.3□□□□□ -0.44
RETREG3-210ENST00000590541 RNF24Q9Y225 148 aa12.3□□□□□ -0.44
RETREG3-210ENST00000590541 ZNF98A6NK75 572 aa12.29□□□□□ -0.44
RETREG3-210ENST00000590541 SOCS3O14543 225 aa12.29□□□□□ -0.44
RETREG3-210ENST00000590541 TMEM14EPQ6UXP3 125 aa12.29□□□□□ -0.44
RETREG3-210ENST00000590541 ZNF705AQ6ZN79 300 aaPredicted RBP12.29□□□□□ -0.44
RETREG3-210ENST00000590541 ZBTB8BQ8NAP8 495 aaPredicted RBP12.29□□□□□ -0.44
RETREG3-210ENST00000590541 NEU1Q99519 415 aa12.29□□□□□ -0.44
RETREG3-210ENST00000590541 SAV1Q9H4B6 383 aaPredicted RBP12.29□□□□□ -0.44
RETREG3-210ENST00000590541 NPVFQ9HCQ7 196 aa12.29□□□□□ -0.44
RETREG3-210ENST00000590541 SMCO3A2RU48 225 aa12.28□□□□□ -0.44
RETREG3-210ENST00000590541 PMS2P5A8MQ11 134 aa12.28□□□□□ -0.44
RETREG3-210ENST00000590541 IL5P05113 134 aa12.28□□□□□ -0.44
RETREG3-210ENST00000590541 ORM2P19652 201 aa12.28□□□□□ -0.44
RETREG3-210ENST00000590541 EMP1P54849 157 aa12.28□□□□□ -0.44
RETREG3-210ENST00000590541 PAX9P55771 341 aa12.28□□□□□ -0.44
RETREG3-210ENST00000590541 ZNF846Q147U1 533 aa12.28□□□□□ -0.44
RETREG3-210ENST00000590541 CYP2G1PQ6ZSU1 146 aa12.28□□□□□ -0.44
RETREG3-210ENST00000590541 LINC00052Q96N35 136 aa12.28□□□□□ -0.44
RETREG3-210ENST00000590541 WDR12Q9GZL7 423 aaKnown RBP12.28□□□□□ -0.44
RETREG3-210ENST00000590541 RPRMQ9NS64 109 aa12.28□□□□□ -0.44
RETREG3-210ENST00000590541 GSKIPQ9P0R6 139 aa12.28□□□□□ -0.44
RETREG3-210ENST00000590541 ZNF705FA8MVS1 300 aaPredicted RBP12.27□□□□□ -0.45
RETREG3-210ENST00000590541 SCGB1D2O95969 90 aa12.27□□□□□ -0.45
RETREG3-210ENST00000590541 ZNF705DP0CH99 300 aaPredicted RBP12.27□□□□□ -0.45
RETREG3-210ENST00000590541 ZNF705BP0CI00 300 aaPredicted RBP12.27□□□□□ -0.45
RETREG3-210ENST00000590541 PLP1P60201 277 aa12.27□□□□□ -0.45
RETREG3-210ENST00000590541 RAP2BP61225 183 aa12.27□□□□□ -0.45
RETREG3-210ENST00000590541 EBLN2Q6P2I7 272 aa12.27□□□□□ -0.45
RETREG3-210ENST00000590541 S100ZQ8WXG8 99 aa12.27□□□□□ -0.45
RETREG3-210ENST00000590541 GGACTQ9BVM4 153 aa12.27□□□□□ -0.45
RETREG3-210ENST00000590541 SLC25A22Q9H936 323 aa12.27□□□□□ -0.45
RETREG3-210ENST00000590541 MGAT4CQ9UBM8 478 aa12.27□□□□□ -0.45
RETREG3-210ENST00000590541 DKK2Q9UBU2 259 aa12.27□□□□□ -0.45
RETREG3-210ENST00000590541 TMEM189A5PLL7 270 aa12.26□□□□□ -0.45
RETREG3-210ENST00000590541 K7EPK0 472 aa12.26□□□□□ -0.45
RETREG3-210ENST00000590541 PXDC1Q5TGL8 231 aa12.26□□□□□ -0.45
RETREG3-210ENST00000590541 TEPPQ6URK8 271 aa12.26□□□□□ -0.45
RETREG3-210ENST00000590541 ZNF431Q8TF32 576 aaPredicted RBP12.26□□□□□ -0.45
RETREG3-210ENST00000590541 C16orf92Q96LL3 132 aa12.26□□□□□ -0.45
RETREG3-210ENST00000590541 SLC25A32Q9H2D1 315 aa12.26□□□□□ -0.45
RETREG3-210ENST00000590541 NUDT15Q9NV35 164 aa12.26□□□□□ -0.45
RETREG3-210ENST00000590541 SMIM9A6NGZ8 99 aa12.25□□□□□ -0.45
RETREG3-210ENST00000590541 HYPMO75409 117 aa12.25□□□□□ -0.45
RETREG3-210ENST00000590541 MBPP02686 304 aaPredicted RBP12.25□□□□□ -0.45
RETREG3-210ENST00000590541 METTL15P1P0C7V9 234 aa12.25□□□□□ -0.45
RETREG3-210ENST00000590541 RPL7P18124 248 aaKnown RBP12.25□□□□□ -0.45
RETREG3-210ENST00000590541 GATA2P23769 480 aaPredicted RBP12.25□□□□□ -0.45
RETREG3-210ENST00000590541 FAM222AQ5U5X8 452 aa12.25□□□□□ -0.45
RETREG3-210ENST00000590541 MZT2BQ6NZ67 158 aa12.25□□□□□ -0.45
RETREG3-210ENST00000590541 TMEM182Q6ZP80 229 aaPredicted RBP12.25□□□□□ -0.45
RETREG3-210ENST00000590541 NIPSNAP3BQ9BS92 247 aa12.25□□□□□ -0.45
RETREG3-210ENST00000590541 RSG1Q9BU20 258 aa12.25□□□□□ -0.45
RETREG3-210ENST00000590541 SLC25A39Q9BZJ4 359 aaPredicted RBP12.25□□□□□ -0.45
RETREG3-210ENST00000590541 HIGD1AQ9Y241 93 aa12.25□□□□□ -0.45
RETREG3-210ENST00000590541 RCL1Q9Y2P8 373 aaKnown RBP12.25□□□□□ -0.45
RETREG3-210ENST00000590541 TRAV6A0A075B6T7 132 aa12.24□□□□□ -0.45
RETREG3-210ENST00000590541 C7orf66A4D0T2 115 aa12.24□□□□□ -0.45
RETREG3-210ENST00000590541 H3BRN7 92 aa12.24□□□□□ -0.45
RETREG3-210ENST00000590541 L7N2F9 121 aa12.24□□□□□ -0.45
RETREG3-210ENST00000590541 LINC00869P0C866 280 aa12.24□□□□□ -0.45
RETREG3-210ENST00000590541 HTN3P15516 51 aa12.24□□□□□ -0.45
RETREG3-210ENST00000590541 VAMP2P63027 116 aa12.24□□□□□ -0.45
RETREG3-210ENST00000590541 TMEM88Q6PEY1 159 aa12.24□□□□□ -0.45
RETREG3-210ENST00000590541 C12orf45Q8N5I9 185 aaPredicted RBP12.24□□□□□ -0.45
RETREG3-210ENST00000590541 SHANK2-AS3Q9BTD1 123 aa12.24□□□□□ -0.45
RETREG3-210ENST00000590541 A0A0J9YX75 114 aa12.23□□□□□ -0.45
RETREG3-210ENST00000590541 FAM240BA0A1B0GVZ2 78 aa12.23□□□□□ -0.45
RETREG3-210ENST00000590541 H2AFB2P0C5Z0 115 aa12.23□□□□□ -0.45
RETREG3-210ENST00000590541 FAM3BP58499 235 aaPredicted RBP12.23□□□□□ -0.45
RETREG3-210ENST00000590541 RRAS2P62070 204 aaPredicted RBP12.23□□□□□ -0.45
RETREG3-210ENST00000590541 PSG9Q00887 426 aa12.23□□□□□ -0.45
RETREG3-210ENST00000590541 OXA1LQ15070 435 aa12.23□□□□□ -0.45
RETREG3-210ENST00000590541 GDF5OSQ5U4N7 250 aa12.23□□□□□ -0.45
RETREG3-210ENST00000590541 ZNF546Q86UE3 836 aa12.23□□□□□ -0.45
RETREG3-210ENST00000590541 C6orf223Q8N319 242 aa12.23□□□□□ -0.45
RETREG3-210ENST00000590541 OR4B1Q8NGF8 309 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms