RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 RPUSD4Q96CM3 377 aaKnown RBP8.78□□□□□ -1
SMAD4-205ENST00000588745 JMJD8Q96S16 334 aa8.78□□□□□ -1
SMAD4-205ENST00000588745 METTL26Q96S19 204 aa8.78□□□□□ -1
SMAD4-205ENST00000588745 SMIM7Q9BQ49 75 aa8.78□□□□□ -1
SMAD4-205ENST00000588745 NIPSNAP3BQ9BS92 247 aa8.78□□□□□ -1
SMAD4-205ENST00000588745 NKX6-2Q9C056 277 aaPredicted RBP8.78□□□□□ -1
SMAD4-205ENST00000588745 PEF1Q9UBV8 284 aaKnown RBP8.78□□□□□ -1
SMAD4-205ENST00000588745 ZNF727A8MUV8 499 aa8.77□□□□□ -1.01
SMAD4-205ENST00000588745 H3BQ15 152 aa8.77□□□□□ -1.01
SMAD4-205ENST00000588745 GGCTO75223 188 aaKnown RBP8.77□□□□□ -1.01
SMAD4-205ENST00000588745 SNRPCP09234 159 aaKnown RBP8.77□□□□□ -1.01
SMAD4-205ENST00000588745 LGALS1P09382 135 aaKnown RBP8.77□□□□□ -1.01
SMAD4-205ENST00000588745 IGLC2P0DOY2 106 aa8.77□□□□□ -1.01
SMAD4-205ENST00000588745 RPL7P18124 248 aaKnown RBP8.77□□□□□ -1.01
SMAD4-205ENST00000588745 ZNF674Q2M3X9 581 aa8.77□□□□□ -1.01
SMAD4-205ENST00000588745 FAM74A3Q4VXF1 159 aa8.77□□□□□ -1.01
SMAD4-205ENST00000588745 AWAT1Q58HT5 328 aa8.77□□□□□ -1.01
SMAD4-205ENST00000588745 BLNKQ8WV28 456 aa8.77□□□□□ -1.01
SMAD4-205ENST00000588745 TMEM190Q8WZ59 177 aa8.77□□□□□ -1.01
SMAD4-205ENST00000588745 UBE2E2Q96LR5 201 aa8.77□□□□□ -1.01
SMAD4-205ENST00000588745 OR5B12Q96R08 314 aa8.77□□□□□ -1.01
SMAD4-205ENST00000588745 ZNF586Q9NXT0 402 aa8.77□□□□□ -1.01
SMAD4-205ENST00000588745 FLNBO75369 2602 aaKnown RBP8.76□□□□□ -1.01
SMAD4-205ENST00000588745 H3BTX0 84 aa8.76□□□□□ -1.01
SMAD4-205ENST00000588745 M0R036 132 aa8.76□□□□□ -1.01
SMAD4-205ENST00000588745 BUB3O43684 328 aa8.76□□□□□ -1.01
SMAD4-205ENST00000588745 NDUFB4O95168 129 aa8.76□□□□□ -1.01
SMAD4-205ENST00000588745 CRYBB3P26998 211 aa8.76□□□□□ -1.01
SMAD4-205ENST00000588745 MYCNOSP40205 109 aa8.76□□□□□ -1.01
SMAD4-205ENST00000588745 SUMO1P63165 101 aaKnown RBP8.76□□□□□ -1.01
SMAD4-205ENST00000588745 UNQ9165/PRO28630Q6UXU0 137 aa8.76□□□□□ -1.01
SMAD4-205ENST00000588745 TVP23CQ96ET8 276 aa8.76□□□□□ -1.01
SMAD4-205ENST00000588745 TCEAL7Q9BRU2 100 aa8.76□□□□□ -1.01
SMAD4-205ENST00000588745 DERL1Q9BUN8 251 aa8.76□□□□□ -1.01
SMAD4-205ENST00000588745 C20orf24Q9BUV8 137 aa8.76□□□□□ -1.01
SMAD4-205ENST00000588745 ELOVL1Q9BW60 279 aa8.76□□□□□ -1.01
SMAD4-205ENST00000588745 C16orf95Q9H693 158 aa8.76□□□□□ -1.01
SMAD4-205ENST00000588745 TRBV19A0A075B6N1 114 aa8.75□□□□□ -1.01
SMAD4-205ENST00000588745 RANP62826 216 aaKnown RBP8.75□□□□□ -1.01
SMAD4-205ENST00000588745 PNRC1Q12796 327 aaPredicted RBP8.75□□□□□ -1.01
SMAD4-205ENST00000588745 RHEBQ15382 184 aa8.75□□□□□ -1.01
SMAD4-205ENST00000588745 OR8I2Q8N0Y5 310 aa8.75□□□□□ -1.01
SMAD4-205ENST00000588745 WIPF2Q8TF74 440 aaPredicted RBP8.75□□□□□ -1.01
SMAD4-205ENST00000588745 GPR82Q96P67 336 aa8.75□□□□□ -1.01
SMAD4-205ENST00000588745 Q9H3A6 140 aa8.75□□□□□ -1.01
SMAD4-205ENST00000588745 OTORQ9NRC9 128 aa8.75□□□□□ -1.01
SMAD4-205ENST00000588745 NAT8Q9UHE5 227 aa8.75□□□□□ -1.01
SMAD4-205ENST00000588745 U3KQE9 123 aa8.75□□□□□ -1.01
SMAD4-205ENST00000588745 CUBNO60494 3623 aa8.75□□□□□ -1.01
SMAD4-205ENST00000588745 ZNF207O43670 478 aaKnown RBP8.74□□□□□ -1.01
SMAD4-205ENST00000588745 PDE6HQ13956 83 aa8.74□□□□□ -1.01
SMAD4-205ENST00000588745 C1orf194Q5T5A4 169 aa8.74□□□□□ -1.01
SMAD4-205ENST00000588745 C2CD4CQ8TF44 421 aa8.74□□□□□ -1.01
SMAD4-205ENST00000588745 SDF2L1Q9HCN8 221 aa8.74□□□□□ -1.01
SMAD4-205ENST00000588745 HIVEP1P15822 2718 aa8.74□□□□□ -1.01
SMAD4-205ENST00000588745 NSD1Q96L73 2696 aaPredicted RBP8.74□□□□□ -1.01
SMAD4-205ENST00000588745 BAHCC1Q9P281 2608 aa8.74□□□□□ -1.01
SMAD4-205ENST00000588745 A0A087X0K7 114 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 PGPA6NDG6 321 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 SLC17A3O00476 420 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 PEX7O00628 323 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 NDUFA7O95182 113 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 APOHP02749 345 aaPredicted RBP8.73□□□□□ -1.01
SMAD4-205ENST00000588745 SLC25A5P05141 298 aaKnown RBP8.73□□□□□ -1.01
SMAD4-205ENST00000588745 ATF4P18848 351 aaPredicted RBP8.73□□□□□ -1.01
SMAD4-205ENST00000588745 AKR1C3P42330 323 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 RPL35P42766 123 aaKnown RBP8.73□□□□□ -1.01
SMAD4-205ENST00000588745 TMEM241Q24JQ0 296 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 RPEL1Q2QD12 228 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 FAM106AQ4KMX7 169 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 TCTEX1D4Q5JR98 221 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 SIGLEC15Q6ZMC9 328 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 GPHB5Q86YW7 130 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 LYPD1Q8N2G4 141 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 C5orf17Q8NAS9 161 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 LINC01006Q8NI28 216 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 HIST1H2BAQ96A08 127 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 C17orf77Q96MU5 243 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 SMAD5-AS1Q9Y6J3 95 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 TRBV20OR9-2A0A075B6H5 130 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 IGHV4OR15-8A0A075B7B6 117 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 IGHV3OR16-13A0A075B7E8 117 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 A0A087WW49 117 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 IGHV3-49A0A0A0MS15 119 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 IGHV3-74A0A0B4J1X5 117 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 IGHV3-66A0A0C4DH42 116 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 ZNF320A2RRD8 509 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 C7orf77A4D0Y5 90 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 C9JCJ5 164 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 TCF21O43680 179 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 ZNF253O75346 499 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 CRLF1O75462 422 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 GALR1P47211 349 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 CDX1P47902 265 aaPredicted RBP8.73□□□□□ -1.01
SMAD4-205ENST00000588745 CNN1P51911 297 aaKnown RBP8.73□□□□□ -1.01
SMAD4-205ENST00000588745 RPL23P62829 140 aaKnown RBP8.73□□□□□ -1.01
SMAD4-205ENST00000588745 GNG5P63218 68 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 C16orf54Q6UWD8 224 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 C4orf3Q8WVX3 66 aa8.73□□□□□ -1.01
SMAD4-205ENST00000588745 RPS10P5Q9NQ39 176 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms