RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 ANKRD29Q8N6D5 301 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 TMEM116Q8NCL8 245 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 FAM57AQ8TBR7 257 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 PLEKHB2Q96CS7 222 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 DPH3Q96FX2 82 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 ZNF414Q96IQ9 312 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 GFRA4Q9GZZ7 299 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 RNASE7Q9H1E1 156 aaKnown RBP4.83□□□□□ -1.64
SMAD4-203ENST00000585448 JPT2Q9H910 190 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 MSRB1Q9NZV6 116 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 CACNG5Q9UF02 275 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 TAC3Q9UHF0 121 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 TCF19Q9Y242 345 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 F11RQ9Y624 299 aaKnown RBP4.83□□□□□ -1.64
SMAD4-203ENST00000585448 DOCK8Q8NF50 2099 aa4.83□□□□□ -1.64
SMAD4-203ENST00000585448 TRBV25-1A0A075B6N4 114 aa4.82□□□□□ -1.64
SMAD4-203ENST00000585448 PMS2P5A8MQ11 134 aa4.82□□□□□ -1.64
SMAD4-203ENST00000585448 CHEK1O14757 476 aa4.82□□□□□ -1.64
SMAD4-203ENST00000585448 ENSAO43768 121 aaKnown RBP4.82□□□□□ -1.64
SMAD4-203ENST00000585448 B4GALT1P15291 398 aa4.82□□□□□ -1.64
SMAD4-203ENST00000585448 EDN2P20800 178 aa4.82□□□□□ -1.64
SMAD4-203ENST00000585448 UBE2D3P61077 147 aa4.82□□□□□ -1.64
SMAD4-203ENST00000585448 UBE2D2P62837 147 aa4.82□□□□□ -1.64
SMAD4-203ENST00000585448 PRDX1Q06830 199 aaKnown RBP4.82□□□□□ -1.64
SMAD4-203ENST00000585448 MZT1Q08AG7 82 aa4.82□□□□□ -1.64
SMAD4-203ENST00000585448 FXYD3Q14802 87 aa4.82□□□□□ -1.64
SMAD4-203ENST00000585448 C1orf195Q5TG92 126 aa4.82□□□□□ -1.64
SMAD4-203ENST00000585448 Q5XG85 94 aa4.82□□□□□ -1.64
SMAD4-203ENST00000585448 GOLT1AQ6ZVE7 132 aa4.82□□□□□ -1.64
SMAD4-203ENST00000585448 PCP2Q8IVA1 136 aa4.82□□□□□ -1.64
SMAD4-203ENST00000585448 SFTPA2Q8IWL1 248 aa4.82□□□□□ -1.64
SMAD4-203ENST00000585448 AMN1Q8IY45 258 aa4.82□□□□□ -1.64
SMAD4-203ENST00000585448 ABHD12Q8N2K0 398 aa4.82□□□□□ -1.64
SMAD4-203ENST00000585448 NRACQ8N912 160 aa4.82□□□□□ -1.64
SMAD4-203ENST00000585448 GJC3Q8NFK1 279 aa4.82□□□□□ -1.64
SMAD4-203ENST00000585448 FAM110DQ8TAY7 271 aaPredicted RBP4.82□□□□□ -1.64
SMAD4-203ENST00000585448 SNRNP40Q96DI7 357 aaKnown RBP4.82□□□□□ -1.64
SMAD4-203ENST00000585448 CYYR1Q96J86 154 aa4.82□□□□□ -1.64
SMAD4-203ENST00000585448 IGF2BP2-AS1Q96M15 143 aa4.82□□□□□ -1.64
SMAD4-203ENST00000585448 LINC00477Q96M19 166 aa4.82□□□□□ -1.64
SMAD4-203ENST00000585448 KRTAP9-8Q9BYQ0 159 aa4.82□□□□□ -1.64
SMAD4-203ENST00000585448 PILRAQ9UKJ1 303 aa4.82□□□□□ -1.64
SMAD4-203ENST00000585448 LTBP1Q14766 1721 aa4.81□□□□□ -1.64
SMAD4-203ENST00000585448 FAM90A10PA6NDY2 464 aa4.81□□□□□ -1.64
SMAD4-203ENST00000585448 TMEM202A6NGA9 273 aa4.81□□□□□ -1.64
SMAD4-203ENST00000585448 FRG2CA6NGY1 282 aa4.81□□□□□ -1.64
SMAD4-203ENST00000585448 FAM90A7PA6NKC0 464 aa4.81□□□□□ -1.64
SMAD4-203ENST00000585448 FAM90A22PA8MWA6 464 aa4.81□□□□□ -1.64
SMAD4-203ENST00000585448 FAM90A12PA8MX19 464 aa4.81□□□□□ -1.64
SMAD4-203ENST00000585448 FAM90A23PA8MXZ1 464 aa4.81□□□□□ -1.64
SMAD4-203ENST00000585448 OOSP1A8MZH6 123 aa4.81□□□□□ -1.64
SMAD4-203ENST00000585448 ZIC3O60481 467 aa4.81□□□□□ -1.64
SMAD4-203ENST00000585448 IGLV2-8P01709 118 aa4.81□□□□□ -1.64
SMAD4-203ENST00000585448 ACYP1P07311 99 aa4.81□□□□□ -1.64
SMAD4-203ENST00000585448 CD7P09564 240 aa4.81□□□□□ -1.64
SMAD4-203ENST00000585448 FAM90A13PP0C7W8 464 aa4.81□□□□□ -1.64
SMAD4-203ENST00000585448 FAM90A24PP0C7X0 464 aa4.81□□□□□ -1.64
SMAD4-203ENST00000585448 RPL35AP18077 110 aaKnown RBP4.81□□□□□ -1.64
SMAD4-203ENST00000585448 TFF3Q07654 80 aa4.81□□□□□ -1.64
SMAD4-203ENST00000585448 EBI3Q14213 229 aa4.81□□□□□ -1.64
SMAD4-203ENST00000585448 ZNF818PQ6ZRF7 136 aa4.81□□□□□ -1.64
SMAD4-203ENST00000585448 Q6ZSR3 168 aa4.81□□□□□ -1.64
SMAD4-203ENST00000585448 APRG1Q8IVJ8 170 aa4.81□□□□□ -1.64
SMAD4-203ENST00000585448 ODF3Q96PU9 254 aa4.81□□□□□ -1.64
SMAD4-203ENST00000585448 SPACA5Q96QH8 159 aa4.81□□□□□ -1.64
SMAD4-203ENST00000585448 HDHD3Q9BSH5 251 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-203ENST00000585448 CHCHD5Q9BSY4 110 aa4.81□□□□□ -1.64
SMAD4-203ENST00000585448 PRRG4Q9BZD6 226 aa4.81□□□□□ -1.64
SMAD4-203ENST00000585448 SLC25A39Q9BZJ4 359 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-203ENST00000585448 EPDR1Q9UM22 224 aa4.81□□□□□ -1.64
SMAD4-203ENST00000585448 FOXA2Q9Y261 457 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-203ENST00000585448 TMED7-TICAM2A0A0A6YYA0 188 aa4.8□□□□□ -1.64
SMAD4-203ENST00000585448 TRAV8-1A0A0A6YYK1 113 aa4.8□□□□□ -1.64
SMAD4-203ENST00000585448 IGKV1-9A0A0C4DH69 117 aa4.8□□□□□ -1.64
SMAD4-203ENST00000585448 A0A0G2JRQ6 117 aa4.8□□□□□ -1.64
SMAD4-203ENST00000585448 IGLV5-39A0A0G2JS06 123 aa4.8□□□□□ -1.64
SMAD4-203ENST00000585448 A0A0U1RRA0 63 aa4.8□□□□□ -1.64
SMAD4-203ENST00000585448 NDUFC2-KCTD14E9PQ53 114 aa4.8□□□□□ -1.64
SMAD4-203ENST00000585448 OVOL1O14753 267 aa4.8□□□□□ -1.64
SMAD4-203ENST00000585448 APOHP02749 345 aaPredicted RBP4.8□□□□□ -1.64
SMAD4-203ENST00000585448 IGKV2-30P06310 120 aa4.8□□□□□ -1.64
SMAD4-203ENST00000585448 CTLA4P16410 223 aa4.8□□□□□ -1.64
SMAD4-203ENST00000585448 CXCL5P42830 114 aa4.8□□□□□ -1.64
SMAD4-203ENST00000585448 CACNG7P62955 275 aa4.8□□□□□ -1.64
SMAD4-203ENST00000585448 C4orf26Q17RF5 130 aa4.8□□□□□ -1.64
SMAD4-203ENST00000585448 TMEM170BQ5T4T1 132 aa4.8□□□□□ -1.64
SMAD4-203ENST00000585448 Q6ZQT7 251 aa4.8□□□□□ -1.64
SMAD4-203ENST00000585448 OR8A1Q8NGG7 326 aa4.8□□□□□ -1.64
SMAD4-203ENST00000585448 IFI27L1Q96BM0 104 aa4.8□□□□□ -1.64
SMAD4-203ENST00000585448 C9orf85Q96MD7 179 aa4.8□□□□□ -1.64
SMAD4-203ENST00000585448 HIST1H4GQ99525 98 aa4.8□□□□□ -1.64
SMAD4-203ENST00000585448 CCL28Q9NRJ3 127 aa4.8□□□□□ -1.64
SMAD4-203ENST00000585448 TP53TG1Q9Y2A0 90 aa4.8□□□□□ -1.64
SMAD4-203ENST00000585448 ZNF256Q9Y2P7 627 aaPredicted RBP4.8□□□□□ -1.64
SMAD4-203ENST00000585448 TRPM6Q9BX84 2022 aa4.79□□□□□ -1.64
SMAD4-203ENST00000585448 TRBV7-3A0A075B6L6 115 aa4.79□□□□□ -1.64
SMAD4-203ENST00000585448 A0A0J9YW62 118 aa4.79□□□□□ -1.64
SMAD4-203ENST00000585448 LOC101059948A0A1B0GTJ6 334 aa4.79□□□□□ -1.64
SMAD4-203ENST00000585448 FAM236AA0A1B0GUQ0 79 aa4.79□□□□□ -1.64
SMAD4-203ENST00000585448 FAM236BA0A1B0GV22 79 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms