RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 VDAC2P45880 294 aaPredicted RBP10.66□□□□□ -0.7
RNF43-208ENST00000584437 MINOS1Q5TGZ0 78 aa10.66□□□□□ -0.7
RNF43-208ENST00000584437 DTX2Q86UW9 622 aa10.66□□□□□ -0.7
RNF43-208ENST00000584437 LIME1Q9H400 295 aa10.66□□□□□ -0.7
RNF43-208ENST00000584437 EDA2RQ9HAV5 297 aa10.66□□□□□ -0.7
RNF43-208ENST00000584437 MINOS1-NBL1R4GNA1 71 aa10.66□□□□□ -0.7
RNF43-208ENST00000584437 CFHR1Q03591 330 aa10.65□□□□□ -0.7
RNF43-208ENST00000584437 ZFP36L1Q07352 338 aaKnown RBP10.65□□□□□ -0.7
RNF43-208ENST00000584437 CSRP2Q16527 193 aa10.65□□□□□ -0.7
RNF43-208ENST00000584437 LHFPL4Q7Z7J7 247 aa10.65□□□□□ -0.7
RNF43-208ENST00000584437 SRSF8Q9BRL6 282 aaKnown RBP10.65□□□□□ -0.7
RNF43-208ENST00000584437 FOXG1P55316 489 aaPredicted RBP10.65□□□□□ -0.7
RNF43-208ENST00000584437 CMC4P56277 68 aaPredicted RBP10.65□□□□□ -0.7
RNF43-208ENST00000584437 RNF144BQ7Z419 303 aa10.65□□□□□ -0.7
RNF43-208ENST00000584437 NCOR1P1Q9H4R4 102 aa10.65□□□□□ -0.7
RNF43-208ENST00000584437 PLSCR4Q9NRQ2 329 aa10.65□□□□□ -0.7
RNF43-208ENST00000584437 LSM4Q9Y4Z0 139 aaKnown RBP10.65□□□□□ -0.7
RNF43-208ENST00000584437 NRXN2Q9P2S2 1712 aa10.65□□□□□ -0.7
RNF43-208ENST00000584437 WNK3Q9BYP7 1800 aa10.65□□□□□ -0.7
RNF43-208ENST00000584437 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.65□□□□□ -0.7
RNF43-208ENST00000584437 LILRA1O75019 489 aa10.65□□□□□ -0.7
RNF43-208ENST00000584437 ZNF688P0C7X2 276 aa10.65□□□□□ -0.7
RNF43-208ENST00000584437 RPL36AP83881 106 aaKnown RBP10.65□□□□□ -0.7
RNF43-208ENST00000584437 RPL36ALQ969Q0 106 aaKnown RBP10.65□□□□□ -0.7
RNF43-208ENST00000584437 ANAPC10Q9UM13 185 aa10.65□□□□□ -0.7
RNF43-208ENST00000584437 LOC285556D6RIA3 1793 aa10.65□□□□□ -0.71
RNF43-208ENST00000584437 PDCD11Q14690 1871 aaKnown RBP10.65□□□□□ -0.71
RNF43-208ENST00000584437 TRBV7-1A0A0A6YYK4 115 aa10.65□□□□□ -0.71
RNF43-208ENST00000584437 LEPROTO15243 131 aa10.64□□□□□ -0.71
RNF43-208ENST00000584437 CLPSP04118 112 aa10.64□□□□□ -0.71
RNF43-208ENST00000584437 DTX1Q86Y01 620 aa10.64□□□□□ -0.71
RNF43-208ENST00000584437 RCHY1Q96PM5 261 aa10.64□□□□□ -0.71
RNF43-208ENST00000584437 SRRM4A7MD48 611 aaKnown RBP10.64□□□□□ -0.71
RNF43-208ENST00000584437 PRB3Q04118 309 aaPredicted RBP10.64□□□□□ -0.71
RNF43-208ENST00000584437 TIMM21Q9BVV7 248 aa10.64□□□□□ -0.71
RNF43-208ENST00000584437 C5orf63A6NC05 138 aa10.64□□□□□ -0.71
RNF43-208ENST00000584437 SELLP14151 372 aa10.64□□□□□ -0.71
RNF43-208ENST00000584437 TRAV8-3A0A0A6YYJ7 113 aa10.64□□□□□ -0.71
RNF43-208ENST00000584437 PRR31Q5SQ13 230 aa10.64□□□□□ -0.71
RNF43-208ENST00000584437 ZCCHC24Q8N2G6 241 aaKnown RBP10.64□□□□□ -0.71
RNF43-208ENST00000584437 LY6G5BQ8NDX9 201 aa10.64□□□□□ -0.71
RNF43-208ENST00000584437 PRADC1Q9BSG0 188 aa10.64□□□□□ -0.71
RNF43-208ENST00000584437 TNS1Q9HBL0 1735 aaKnown RBP10.64□□□□□ -0.71
RNF43-208ENST00000584437 STPG4Q8N801 248 aa10.63□□□□□ -0.71
RNF43-208ENST00000584437 Q8TAT8 98 aa10.63□□□□□ -0.71
RNF43-208ENST00000584437 F8W1H4 67 aa10.63□□□□□ -0.71
RNF43-208ENST00000584437 NPC2P61916 151 aa10.63□□□□□ -0.71
RNF43-208ENST00000584437 ZNF415Q09FC8 603 aa10.63□□□□□ -0.71
RNF43-208ENST00000584437 HTN3P15516 51 aa10.63□□□□□ -0.71
RNF43-208ENST00000584437 C5orf64Q2M2E5 130 aa10.63□□□□□ -0.71
RNF43-208ENST00000584437 PPDPFLQ8WWR9 84 aa10.63□□□□□ -0.71
RNF43-208ENST00000584437 SIGLEC9Q9Y336 463 aa10.63□□□□□ -0.71
RNF43-208ENST00000584437 BRCA1P38398 1863 aaKnown RBP10.63□□□□□ -0.71
RNF43-208ENST00000584437 C14orf178Q8N769 122 aaPredicted RBP10.63□□□□□ -0.71
RNF43-208ENST00000584437 SHANK2-AS3Q9BTD1 123 aa10.63□□□□□ -0.71
RNF43-208ENST00000584437 LAMTOR3Q9UHA4 124 aa10.63□□□□□ -0.71
RNF43-208ENST00000584437 TMEM178BH3BS89 294 aa10.63□□□□□ -0.71
RNF43-208ENST00000584437 ARMS2P0C7Q2 107 aa10.63□□□□□ -0.71
RNF43-208ENST00000584437 ZNF474Q6S9Z5 364 aaPredicted RBP10.63□□□□□ -0.71
RNF43-208ENST00000584437 TMEM75Q8N9X5 138 aa10.63□□□□□ -0.71
RNF43-208ENST00000584437 IL18BPO95998 194 aa10.62□□□□□ -0.71
RNF43-208ENST00000584437 METRNQ9UJH8 293 aa10.62□□□□□ -0.71
RNF43-208ENST00000584437 TRAV40A0A0B4J280 105 aa10.62□□□□□ -0.71
RNF43-208ENST00000584437 SMKR1H3BMG3 65 aa10.62□□□□□ -0.71
RNF43-208ENST00000584437 SLAQ13239 276 aa10.62□□□□□ -0.71
RNF43-208ENST00000584437 FAM231DQ6ZW35 169 aa10.62□□□□□ -0.71
RNF43-208ENST00000584437 MESP1Q9BRJ9 268 aa10.62□□□□□ -0.71
RNF43-208ENST00000584437 MCRIP2Q9BUT9 160 aaKnown RBP10.62□□□□□ -0.71
RNF43-208ENST00000584437 SBF2Q86WG5 1849 aa10.62□□□□□ -0.71
RNF43-208ENST00000584437 NPSP0C0P6 89 aa10.62□□□□□ -0.71
RNF43-208ENST00000584437 INAFM2P0DMQ5 153 aa10.62□□□□□ -0.71
RNF43-208ENST00000584437 ARHGEF17Q96PE2 2063 aaPredicted RBP10.62□□□□□ -0.71
RNF43-208ENST00000584437 VWC2LB2RUY7 222 aa10.62□□□□□ -0.71
RNF43-208ENST00000584437 Q6ZWC4 215 aa10.62□□□□□ -0.71
RNF43-208ENST00000584437 COLQQ9Y215 455 aaPredicted RBP10.62□□□□□ -0.71
RNF43-208ENST00000584437 K7EP34 96 aa10.61□□□□□ -0.71
RNF43-208ENST00000584437 ZNF48Q96MX3 618 aaPredicted RBP10.61□□□□□ -0.71
RNF43-208ENST00000584437 PRSS46E5RG02 174 aa10.61□□□□□ -0.71
RNF43-208ENST00000584437 H3BMM0 161 aa10.61□□□□□ -0.71
RNF43-208ENST00000584437 C9orf153Q5TBE3 101 aa10.61□□□□□ -0.71
RNF43-208ENST00000584437 UBE2WQ96B02 151 aa10.61□□□□□ -0.71
RNF43-208ENST00000584437 RSPO3Q9BXY4 272 aaPredicted RBP10.61□□□□□ -0.71
RNF43-208ENST00000584437 MPDZO75970 2070 aa10.61□□□□□ -0.71
RNF43-208ENST00000584437 LYNX1G3V0Z9 82 aa10.61□□□□□ -0.71
RNF43-208ENST00000584437 K7EP13 123 aa10.61□□□□□ -0.71
RNF43-208ENST00000584437 LYNX1P0DP58 116 aa10.61□□□□□ -0.71
RNF43-208ENST00000584437 COX8AP10176 69 aa10.61□□□□□ -0.71
RNF43-208ENST00000584437 FAM104BQ5XKR9 115 aa10.61□□□□□ -0.71
RNF43-208ENST00000584437 C17orf82Q86X59 251 aaPredicted RBP10.61□□□□□ -0.71
RNF43-208ENST00000584437 NTN3O00634 580 aaPredicted RBP10.61□□□□□ -0.71
RNF43-208ENST00000584437 C5orf24Q7Z6I8 188 aa10.61□□□□□ -0.71
RNF43-208ENST00000584437 GAFA1Q96PS6 74 aa10.61□□□□□ -0.71
RNF43-208ENST00000584437 LINC00479Q96M42 142 aa10.6□□□□□ -0.71
RNF43-208ENST00000584437 GREB1Q4ZG55 1949 aa10.6□□□□□ -0.71
RNF43-208ENST00000584437 PLXNA1Q9UIW2 1896 aa10.6□□□□□ -0.71
RNF43-208ENST00000584437 A0A1B0GUS0 222 aa10.6□□□□□ -0.71
RNF43-208ENST00000584437 FHL1Q13642 323 aa10.6□□□□□ -0.71
RNF43-208ENST00000584437 ZNF672Q499Z4 452 aaPredicted RBP10.6□□□□□ -0.71
RNF43-208ENST00000584437 GAGE2AQ6NT46 116 aa10.6□□□□□ -0.71
RNF43-208ENST00000584437 C1orf122Q6ZSJ8 110 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms