RNA–Protein interactions for RNA: ENST00000580004.1

NEK4P2-201, Transcript of NIMA-related kinase 4 pseudogene 2, humanhuman

BASIC

Gene NEK4P2, Length 1,012 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P2-201ENST00000580004 PRR20CP86479 221 aa13.75□□□□□ -0.21
NEK4P2-201ENST00000580004 PRR20DP86480 221 aa13.75□□□□□ -0.21
NEK4P2-201ENST00000580004 PRR20BP86481 221 aa13.75□□□□□ -0.21
NEK4P2-201ENST00000580004 PRR20AP86496 221 aa13.75□□□□□ -0.21
NEK4P2-201ENST00000580004 TRPT1Q86TN4 253 aaKnown RBP13.75□□□□□ -0.21
NEK4P2-201ENST00000580004 OR5C1Q8NGR4 320 aa13.75□□□□□ -0.21
NEK4P2-201ENST00000580004 GATAD1Q8WUU5 269 aa13.75□□□□□ -0.21
NEK4P2-201ENST00000580004 RNF183Q96D59 192 aa13.75□□□□□ -0.21
NEK4P2-201ENST00000580004 OVOL2Q9BRP0 275 aa13.75□□□□□ -0.21
NEK4P2-201ENST00000580004 MED28Q9H204 178 aa13.75□□□□□ -0.21
NEK4P2-201ENST00000580004 DOK5Q9P104 306 aa13.75□□□□□ -0.21
NEK4P2-201ENST00000580004 C3orf84H3BNL1 204 aa13.74□□□□□ -0.21
NEK4P2-201ENST00000580004 SPRY2O43597 315 aa13.74□□□□□ -0.21
NEK4P2-201ENST00000580004 NHLH2Q02577 135 aa13.74□□□□□ -0.21
NEK4P2-201ENST00000580004 OPCMLQ14982 345 aa13.74□□□□□ -0.21
NEK4P2-201ENST00000580004 SPATA31B1PQ5VZV4 182 aa13.74□□□□□ -0.21
NEK4P2-201ENST00000580004 PATE2Q6UY27 113 aa13.74□□□□□ -0.21
NEK4P2-201ENST00000580004 OR1L4Q8NGR5 311 aa13.74□□□□□ -0.21
NEK4P2-201ENST00000580004 PFDN5Q99471 154 aa13.74□□□□□ -0.21
NEK4P2-201ENST00000580004 RNF126Q9BV68 326 aa13.74□□□□□ -0.21
NEK4P2-201ENST00000580004 SCRT1Q9BWW7 348 aa13.74□□□□□ -0.21
NEK4P2-201ENST00000580004 RETNQ9HD89 108 aa13.74□□□□□ -0.21
NEK4P2-201ENST00000580004 AGRNO00468 2067 aa13.73□□□□□ -0.21
NEK4P2-201ENST00000580004 A0A087X0K7 114 aa13.73□□□□□ -0.21
NEK4P2-201ENST00000580004 COX7A2P2O60397 106 aa13.73□□□□□ -0.21
NEK4P2-201ENST00000580004 LYL1P12980 280 aa13.73□□□□□ -0.21
NEK4P2-201ENST00000580004 OXA1LQ15070 435 aa13.73□□□□□ -0.21
NEK4P2-201ENST00000580004 LINC00305Q7Z4B0 112 aa13.73□□□□□ -0.21
NEK4P2-201ENST00000580004 RSG1Q9BU20 258 aa13.73□□□□□ -0.21
NEK4P2-201ENST00000580004 KCNIP2Q9NS61 270 aa13.73□□□□□ -0.21
NEK4P2-201ENST00000580004 ATF4P18848 351 aaPredicted RBP13.72□□□□□ -0.21
NEK4P2-201ENST00000580004 CXCL3P19876 107 aa13.72□□□□□ -0.21
NEK4P2-201ENST00000580004 FGF7P21781 194 aa13.72□□□□□ -0.21
NEK4P2-201ENST00000580004 DEFB135Q30KP9 77 aa13.72□□□□□ -0.21
NEK4P2-201ENST00000580004 ACTL10Q5JWF8 245 aa13.72□□□□□ -0.21
NEK4P2-201ENST00000580004 C10orf113Q5VZT2 155 aa13.72□□□□□ -0.21
NEK4P2-201ENST00000580004 IL17DQ8TAD2 202 aa13.72□□□□□ -0.21
NEK4P2-201ENST00000580004 MUC7Q8TAX7 377 aa13.72□□□□□ -0.21
NEK4P2-201ENST00000580004 CLUHP3Q96NS8 147 aa13.72□□□□□ -0.21
NEK4P2-201ENST00000580004 UHRF2Q96PU4 802 aa13.72□□□□□ -0.21
NEK4P2-201ENST00000580004 DNAJC4Q9NNZ3 241 aa13.72□□□□□ -0.21
NEK4P2-201ENST00000580004 HLA-DRB4P13762 266 aa13.71□□□□□ -0.21
NEK4P2-201ENST00000580004 CXCL2P19875 107 aa13.71□□□□□ -0.21
NEK4P2-201ENST00000580004 B2MP61769 119 aa13.71□□□□□ -0.21
NEK4P2-201ENST00000580004 NUTF2P61970 127 aaKnown RBP13.71□□□□□ -0.21
NEK4P2-201ENST00000580004 FGL1Q08830 312 aa13.71□□□□□ -0.21
NEK4P2-201ENST00000580004 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.71□□□□□ -0.21
NEK4P2-201ENST00000580004 FOXI2Q6ZQN5 318 aa13.71□□□□□ -0.21
NEK4P2-201ENST00000580004 THAP6Q8TBB0 222 aa13.71□□□□□ -0.21
NEK4P2-201ENST00000580004 TMEM37Q8WXS4 190 aa13.71□□□□□ -0.21
NEK4P2-201ENST00000580004 C16orf92Q96LL3 132 aa13.71□□□□□ -0.21
NEK4P2-201ENST00000580004 NPCDR1Q9BY65 106 aa13.71□□□□□ -0.21
NEK4P2-201ENST00000580004 RPRMQ9NS64 109 aa13.71□□□□□ -0.21
NEK4P2-201ENST00000580004 SLC39A9Q9NUM3 307 aa13.71□□□□□ -0.21
NEK4P2-201ENST00000580004 HSPB11Q9Y547 144 aa13.71□□□□□ -0.21
NEK4P2-201ENST00000580004 HLA-DRB4X5D2U9 266 aa13.71□□□□□ -0.21
NEK4P2-201ENST00000580004 CA1P00915 261 aaPredicted RBP13.7□□□□□ -0.22
NEK4P2-201ENST00000580004 RPL12P30050 165 aaKnown RBP13.7□□□□□ -0.22
NEK4P2-201ENST00000580004 MIC13Q5XKP0 118 aa13.7□□□□□ -0.22
NEK4P2-201ENST00000580004 BPIFA4PQ86YQ2 179 aa13.7□□□□□ -0.22
NEK4P2-201ENST00000580004 OR11H7Q8NGC8 314 aa13.7□□□□□ -0.22
NEK4P2-201ENST00000580004 C17orf77Q96MU5 243 aa13.7□□□□□ -0.22
NEK4P2-201ENST00000580004 C1QTNF4Q9BXJ3 329 aa13.7□□□□□ -0.22
NEK4P2-201ENST00000580004 SAV1Q9H4B6 383 aaPredicted RBP13.7□□□□□ -0.22
NEK4P2-201ENST00000580004 MBD2Q9UBB5 411 aa13.7□□□□□ -0.22
NEK4P2-201ENST00000580004 KNCNA6PVL3 124 aa13.69□□□□□ -0.22
NEK4P2-201ENST00000580004 H3BMM0 161 aa13.69□□□□□ -0.22
NEK4P2-201ENST00000580004 GIPP09681 153 aaPredicted RBP13.69□□□□□ -0.22
NEK4P2-201ENST00000580004 FCN2Q15485 313 aa13.69□□□□□ -0.22
NEK4P2-201ENST00000580004 LINC00052Q96N35 136 aa13.69□□□□□ -0.22
NEK4P2-201ENST00000580004 ATP5SQ99766 215 aa13.69□□□□□ -0.22
NEK4P2-201ENST00000580004 WDR61Q9GZS3 305 aaKnown RBP13.69□□□□□ -0.22
NEK4P2-201ENST00000580004 PXMP4Q9Y6I8 212 aa13.69□□□□□ -0.22
NEK4P2-201ENST00000580004 C17orf112F2Z3M2 114 aa13.68□□□□□ -0.22
NEK4P2-201ENST00000580004 MRPS12O15235 138 aaKnown RBP13.68□□□□□ -0.22
NEK4P2-201ENST00000580004 CLINT1Q14677 625 aa13.68□□□□□ -0.22
NEK4P2-201ENST00000580004 EBLN2Q6P2I7 272 aa13.68□□□□□ -0.22
NEK4P2-201ENST00000580004 ZNF709Q8N972 641 aa13.68□□□□□ -0.22
NEK4P2-201ENST00000580004 PARD6GQ9BYG4 376 aaPredicted RBP13.68□□□□□ -0.22
NEK4P2-201ENST00000580004 LCN15Q6UWW0 184 aa13.67□□□□□ -0.22
NEK4P2-201ENST00000580004 CLEC5AQ9NY25 188 aa13.67□□□□□ -0.22
NEK4P2-201ENST00000580004 GUK1Q16774 197 aa13.66□□□□□ -0.22
NEK4P2-201ENST00000580004 RARRES2Q99969 163 aa13.66□□□□□ -0.22
NEK4P2-201ENST00000580004 SLC50A1Q9BRV3 221 aa13.66□□□□□ -0.22
NEK4P2-201ENST00000580004 CSMD3Q7Z407 3707 aa13.65□□□□□ -0.22
NEK4P2-201ENST00000580004 IFNA5P01569 189 aa13.65□□□□□ -0.22
NEK4P2-201ENST00000580004 GIG44P09565 113 aaPredicted RBP13.65□□□□□ -0.22
NEK4P2-201ENST00000580004 HRH4Q9H3N8 390 aa13.65□□□□□ -0.22
NEK4P2-201ENST00000580004 TRAV8-2A0A0B4J237 113 aa13.64□□□□□ -0.23
NEK4P2-201ENST00000580004 A0A0J9YX75 114 aa13.64□□□□□ -0.23
NEK4P2-201ENST00000580004 IGLC2P0DOY2 106 aa13.64□□□□□ -0.23
NEK4P2-201ENST00000580004 LRRC20Q8TCA0 184 aa13.64□□□□□ -0.23
NEK4P2-201ENST00000580004 AQP10Q96PS8 301 aa13.64□□□□□ -0.23
NEK4P2-201ENST00000580004 TMEM14CQ9P0S9 112 aa13.64□□□□□ -0.23
NEK4P2-201ENST00000580004 A8MTW9 85 aa13.63□□□□□ -0.23
NEK4P2-201ENST00000580004 ZNF253O75346 499 aa13.63□□□□□ -0.23
NEK4P2-201ENST00000580004 DUSP14O95147 198 aaKnown RBP13.63□□□□□ -0.23
NEK4P2-201ENST00000580004 C4BPBP20851 252 aa13.63□□□□□ -0.23
NEK4P2-201ENST00000580004 CSNK1G2-AS1Q8NCQ2 148 aa13.63□□□□□ -0.23
NEK4P2-201ENST00000580004 OR11H2Q8NH07 326 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms