RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, human

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT1-222	ENST00000570139		A0A1W2PRD5	423 aa		5.42	□□□□□ -1.54
CNOT1-222	ENST00000570139		A0A1W2PRF3	423 aa		5.42	□□□□□ -1.54
CNOT1-222	ENST00000570139		A0A1W2PRM7	423 aa		5.42	□□□□□ -1.54
CNOT1-222	ENST00000570139	NCBP2L	A6PVI3	153 aa	Known RBP	5.42	□□□□□ -1.54
CNOT1-222	ENST00000570139	CNIH1	O95406	144 aa		5.42	□□□□□ -1.54
CNOT1-222	ENST00000570139	CA2	P00918	260 aa		5.42	□□□□□ -1.54
CNOT1-222	ENST00000570139	MB	P02144	154 aa		5.42	□□□□□ -1.54
CNOT1-222	ENST00000570139	IFNA4	P05014	189 aa		5.42	□□□□□ -1.54
CNOT1-222	ENST00000570139	SULT1A2	P50226	295 aa		5.42	□□□□□ -1.54
CNOT1-222	ENST00000570139	NDUFV3	P56181	108 aa	Known RBP	5.42	□□□□□ -1.54
CNOT1-222	ENST00000570139	PLP1	P60201	277 aa		5.42	□□□□□ -1.54
CNOT1-222	ENST00000570139	PRB3	Q04118	309 aa	Predicted RBP	5.42	□□□□□ -1.54
CNOT1-222	ENST00000570139	CLINT1	Q14677	625 aa		5.42	□□□□□ -1.54
CNOT1-222	ENST00000570139	ALKAL2	Q6UX46	152 aa		5.42	□□□□□ -1.54
CNOT1-222	ENST00000570139	DYNAP	Q8N1N2	210 aa		5.42	□□□□□ -1.54
CNOT1-222	ENST00000570139	ZNF709	Q8N972	641 aa		5.42	□□□□□ -1.54
CNOT1-222	ENST00000570139	OR2G3	Q8NGZ4	309 aa		5.42	□□□□□ -1.54
CNOT1-222	ENST00000570139	OR1P1	Q8NH06	330 aa		5.42	□□□□□ -1.54
CNOT1-222	ENST00000570139	SMIM3	Q9BZL3	60 aa		5.42	□□□□□ -1.54
CNOT1-222	ENST00000570139	WDR61	Q9GZS3	305 aa	Known RBP	5.42	□□□□□ -1.54
CNOT1-222	ENST00000570139	PPDPF	Q9H3Y8	114 aa		5.42	□□□□□ -1.54
CNOT1-222	ENST00000570139	FBXL15	Q9H469	300 aa		5.42	□□□□□ -1.54
CNOT1-222	ENST00000570139	NPVF	Q9HCQ7	196 aa		5.42	□□□□□ -1.54
CNOT1-222	ENST00000570139	MED9	Q9NWA0	146 aa		5.42	□□□□□ -1.54
CNOT1-222	ENST00000570139	ABCA2	Q9BZC7	2435 aa		5.41	□□□□□ -1.54
CNOT1-222	ENST00000570139	UBE2L5P	A0A1B0GUS4	154 aa		5.41	□□□□□ -1.54
CNOT1-222	ENST00000570139	IGLC7	A0M8Q6	106 aa		5.41	□□□□□ -1.54
CNOT1-222	ENST00000570139	TEX46	H3BTG2	121 aa		5.41	□□□□□ -1.54
CNOT1-222	ENST00000570139	CD5L	O43866	347 aa		5.41	□□□□□ -1.54
CNOT1-222	ENST00000570139	ATP5L	O75964	103 aa		5.41	□□□□□ -1.54
CNOT1-222	ENST00000570139	CFD	P00746	253 aa	Predicted RBP	5.41	□□□□□ -1.54
CNOT1-222	ENST00000570139	RNASE2	P10153	161 aa	Known RBP	5.41	□□□□□ -1.54
CNOT1-222	ENST00000570139	HIST1H1B	P16401	226 aa	Known RBP	5.41	□□□□□ -1.54
CNOT1-222	ENST00000570139	RAB2A	P61019	212 aa		5.41	□□□□□ -1.54
CNOT1-222	ENST00000570139	WT1-AS	Q06250	92 aa		5.41	□□□□□ -1.54
CNOT1-222	ENST00000570139	MRGPRG-AS1	Q2M3A8	158 aa		5.41	□□□□□ -1.54
CNOT1-222	ENST00000570139	KLF17	Q5JT82	389 aa	Predicted RBP	5.41	□□□□□ -1.54
CNOT1-222	ENST00000570139	RUSC1-AS1	Q66K80	236 aa		5.41	□□□□□ -1.54
CNOT1-222	ENST00000570139	UQCC3	Q6UW78	93 aa		5.41	□□□□□ -1.54
CNOT1-222	ENST00000570139	HSD17B11	Q8NBQ5	300 aa		5.41	□□□□□ -1.54
CNOT1-222	ENST00000570139	ARPC1A	Q92747	370 aa		5.41	□□□□□ -1.54
CNOT1-222	ENST00000570139	SLC35E1	Q96K37	410 aa		5.41	□□□□□ -1.54
CNOT1-222	ENST00000570139	GEMIN7	Q9H840	131 aa	Known RBP	5.41	□□□□□ -1.54
CNOT1-222	ENST00000570139	ZNF580	Q9UK33	172 aa		5.41	□□□□□ -1.54
CNOT1-222	ENST00000570139	CSDC2	Q9Y534	153 aa	Known RBP	5.41	□□□□□ -1.54
CNOT1-222	ENST00000570139	F11R	Q9Y624	299 aa	Known RBP	5.41	□□□□□ -1.54
CNOT1-222	ENST00000570139	CR1	P17927	2039 aa		5.41	□□□□□ -1.54
CNOT1-222	ENST00000570139	PRRC2A	P48634	2157 aa	Known RBP	5.4	□□□□□ -1.54
CNOT1-222	ENST00000570139	HECTD1	Q9ULT8	2610 aa		5.4	□□□□□ -1.54
CNOT1-222	ENST00000570139	IGKV2D-30	A0A075B6S6	120 aa		5.4	□□□□□ -1.54
CNOT1-222	ENST00000570139	LINC00862	A6NCI5	91 aa		5.4	□□□□□ -1.54
CNOT1-222	ENST00000570139	FABP1	P07148	127 aa		5.4	□□□□□ -1.54
CNOT1-222	ENST00000570139	CRYGC	P07315	174 aa		5.4	□□□□□ -1.54
CNOT1-222	ENST00000570139	OR13C7	P0DN81	318 aa		5.4	□□□□□ -1.54
CNOT1-222	ENST00000570139	FGF7	P21781	194 aa		5.4	□□□□□ -1.54
CNOT1-222	ENST00000570139	CNTFR	P26992	372 aa		5.4	□□□□□ -1.54
CNOT1-222	ENST00000570139	ATP6V0C	P27449	155 aa		5.4	□□□□□ -1.54
CNOT1-222	ENST00000570139	OPRK1	P41145	380 aa		5.4	□□□□□ -1.54
CNOT1-222	ENST00000570139	CRIP2	P52943	208 aa	Predicted RBP	5.4	□□□□□ -1.54
CNOT1-222	ENST00000570139	FXYD3	Q14802	87 aa		5.4	□□□□□ -1.54
CNOT1-222	ENST00000570139	TIGIT	Q495A1	244 aa		5.4	□□□□□ -1.54
CNOT1-222	ENST00000570139	SPINK9	Q5DT21	86 aa		5.4	□□□□□ -1.54
CNOT1-222	ENST00000570139	AKR1C8P	Q5T2L2	129 aa		5.4	□□□□□ -1.54
CNOT1-222	ENST00000570139	BRD3OS	Q6XYD6	125 aa		5.4	□□□□□ -1.54
CNOT1-222	ENST00000570139	TMEM86B	Q8N661	226 aa		5.4	□□□□□ -1.54
CNOT1-222	ENST00000570139	C5orf56	Q8N8D9	126 aa		5.4	□□□□□ -1.54
CNOT1-222	ENST00000570139		Q8N9W7	124 aa		5.4	□□□□□ -1.54
CNOT1-222	ENST00000570139	WFDC11	Q8NEX6	87 aa		5.4	□□□□□ -1.54
CNOT1-222	ENST00000570139	C17orf50	Q8WW18	174 aa		5.4	□□□□□ -1.54
CNOT1-222	ENST00000570139	P2RX4	Q99571	388 aa		5.4	□□□□□ -1.54
CNOT1-222	ENST00000570139	WFDC1	Q9HC57	220 aa		5.4	□□□□□ -1.54
CNOT1-222	ENST00000570139	PARP11	Q9NR21	331 aa		5.4	□□□□□ -1.54
CNOT1-222	ENST00000570139	PDZD2	O15018	2839 aa		5.4	□□□□□ -1.55
CNOT1-222	ENST00000570139	VPS13C	Q709C8	3753 aa		5.39	□□□□□ -1.55
CNOT1-222	ENST00000570139	IGLV4-3	A0A075B6K6	122 aa		5.39	□□□□□ -1.55
CNOT1-222	ENST00000570139		A6NDX4	124 aa		5.39	□□□□□ -1.55
CNOT1-222	ENST00000570139	ZNF705E	A8MWA4	302 aa	Predicted RBP	5.39	□□□□□ -1.55
CNOT1-222	ENST00000570139		H3BUX3	64 aa		5.39	□□□□□ -1.55
CNOT1-222	ENST00000570139	BRI3	O95415	125 aa		5.39	□□□□□ -1.55
CNOT1-222	ENST00000570139	HBE1	P02100	147 aa		5.39	□□□□□ -1.55
CNOT1-222	ENST00000570139	PRH1	P02810	166 aa		5.39	□□□□□ -1.55
CNOT1-222	ENST00000570139	NMB	P08949	121 aa		5.39	□□□□□ -1.55
CNOT1-222	ENST00000570139	DEFA4	P12838	97 aa		5.39	□□□□□ -1.55
CNOT1-222	ENST00000570139	CTRB1	P17538	263 aa		5.39	□□□□□ -1.55
CNOT1-222	ENST00000570139	MDK	P21741	143 aa	Predicted RBP	5.39	□□□□□ -1.55
CNOT1-222	ENST00000570139	RAB9A	P51151	201 aa		5.39	□□□□□ -1.55
CNOT1-222	ENST00000570139	SELENOT	P62341	195 aa		5.39	□□□□□ -1.55
CNOT1-222	ENST00000570139	AKR1C1	Q04828	323 aa		5.39	□□□□□ -1.55
CNOT1-222	ENST00000570139	KLK9	Q2XQG4	91 aa		5.39	□□□□□ -1.55
CNOT1-222	ENST00000570139	CTRB2	Q6GPI1	263 aa		5.39	□□□□□ -1.55
CNOT1-222	ENST00000570139	IL34	Q6ZMJ4	242 aa		5.39	□□□□□ -1.55
CNOT1-222	ENST00000570139	SLC16A13	Q7RTY0	426 aa		5.39	□□□□□ -1.55
CNOT1-222	ENST00000570139	TMEM144	Q7Z5S9	345 aa		5.39	□□□□□ -1.55
CNOT1-222	ENST00000570139	TTC9C	Q8N5M4	171 aa		5.39	□□□□□ -1.55
CNOT1-222	ENST00000570139	LFNG	Q8NES3	379 aa		5.39	□□□□□ -1.55
CNOT1-222	ENST00000570139	OR10W1	Q8NGF6	305 aa		5.39	□□□□□ -1.55
CNOT1-222	ENST00000570139	SGMS2	Q8NHU3	365 aa		5.39	□□□□□ -1.55
CNOT1-222	ENST00000570139	C19orf24	Q9BVV8	132 aa		5.39	□□□□□ -1.55
CNOT1-222	ENST00000570139	NPCDR1	Q9BY65	106 aa		5.39	□□□□□ -1.55
CNOT1-222	ENST00000570139	KLK9	Q9UKQ9	250 aa		5.39	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms