RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 M0R2P5 195 aa7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 CTGFP29279 349 aa7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 GFERP55789 205 aa7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 TMEM52BQ4KMG9 183 aa7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 DEFB132Q7Z7B7 95 aa7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 EXOC3-AS1Q8N2X6 119 aa7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 Q96M66 194 aa7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 ZNF747Q9BV97 191 aa7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 HMGA1P17096 107 aaKnown RBP7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 Q8N1Y9 231 aa7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 LIME1Q9H400 295 aa7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 SIGLEC9Q9Y336 463 aa7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 IGKV1-8A0A0C4DH67 115 aa7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 ATOX1O00244 68 aa7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 C8orf88P0DMB2 117 aa7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 IL15RAQ13261 267 aa7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 TMEM86BQ8N661 226 aa7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 LHFPL6Q9Y693 200 aa7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 MYO16Q9Y6X6 1858 aa7.33□□□□□ -1.24
GTF2A1-203ENST00000553612 A0A1W2PPV9 198 aa7.32□□□□□ -1.24
GTF2A1-203ENST00000553612 C9JCJ5 164 aa7.32□□□□□ -1.24
GTF2A1-203ENST00000553612 NFE4Q86UQ8 179 aa7.32□□□□□ -1.24
GTF2A1-203ENST00000553612 DRAM1Q8N682 238 aa7.32□□□□□ -1.24
GTF2A1-203ENST00000553612 TRPM6Q9BX84 2022 aa7.32□□□□□ -1.24
GTF2A1-203ENST00000553612 C17orf98A8MV24 154 aa7.32□□□□□ -1.24
GTF2A1-203ENST00000553612 SMRP1Q8NCR6 262 aa7.32□□□□□ -1.24
GTF2A1-203ENST00000553612 DSCAML1Q8TD84 2053 aa7.32□□□□□ -1.24
GTF2A1-203ENST00000553612 LGALS1P09382 135 aaKnown RBP7.32□□□□□ -1.24
GTF2A1-203ENST00000553612 EFNB3Q15768 340 aa7.32□□□□□ -1.24
GTF2A1-203ENST00000553612 Q6ZR03 302 aa7.32□□□□□ -1.24
GTF2A1-203ENST00000553612 LINC00305Q7Z4B0 112 aa7.32□□□□□ -1.24
GTF2A1-203ENST00000553612 NCOR1O75376 2440 aa7.32□□□□□ -1.24
GTF2A1-203ENST00000553612 TOGARAM1Q9Y4F4 1720 aa7.32□□□□□ -1.24
GTF2A1-203ENST00000553612 C2CD4DB7Z1M9 353 aa7.32□□□□□ -1.24
GTF2A1-203ENST00000553612 GATA4P43694 442 aa7.32□□□□□ -1.24
GTF2A1-203ENST00000553612 LINC01545Q5VT33 79 aa7.32□□□□□ -1.24
GTF2A1-203ENST00000553612 HIGD1BQ9P298 99 aa7.32□□□□□ -1.24
GTF2A1-203ENST00000553612 C5orf63A6NC05 138 aa7.31□□□□□ -1.24
GTF2A1-203ENST00000553612 NDPQ00604 133 aa7.31□□□□□ -1.24
GTF2A1-203ENST00000553612 DOT1LQ8TEK3 1739 aa7.31□□□□□ -1.24
GTF2A1-203ENST00000553612 IGHV3OR16-13A0A075B7E8 117 aa7.31□□□□□ -1.24
GTF2A1-203ENST00000553612 IGHV3-74A0A0B4J1X5 117 aa7.31□□□□□ -1.24
GTF2A1-203ENST00000553612 LGALS9BQ3B8N2 356 aa7.31□□□□□ -1.24
GTF2A1-203ENST00000553612 LGALS9CQ6DKI2 356 aa7.31□□□□□ -1.24
GTF2A1-203ENST00000553612 DDX60Q8IY21 1712 aaKnown RBP7.31□□□□□ -1.24
GTF2A1-203ENST00000553612 TDRD6O60522 2096 aaKnown RBP7.31□□□□□ -1.24
GTF2A1-203ENST00000553612 SPRY3O43610 288 aa7.31□□□□□ -1.24
GTF2A1-203ENST00000553612 SLC25A16P16260 332 aa7.31□□□□□ -1.24
GTF2A1-203ENST00000553612 ZNF826PQ6ZT77 177 aa7.31□□□□□ -1.24
GTF2A1-203ENST00000553612 TMEM158Q8WZ71 300 aa7.31□□□□□ -1.24
GTF2A1-203ENST00000553612 ALS2Q96Q42 1657 aa7.31□□□□□ -1.24
GTF2A1-203ENST00000553612 LRRK1Q38SD2 2015 aa7.3□□□□□ -1.24
GTF2A1-203ENST00000553612 DLEC1Q9Y238 1755 aa7.3□□□□□ -1.24
GTF2A1-203ENST00000553612 FER1L5A0AVI2 2057 aa7.3□□□□□ -1.24
GTF2A1-203ENST00000553612 IGHV3-66A0A0C4DH42 116 aa7.3□□□□□ -1.24
GTF2A1-203ENST00000553612 SMIM27A0A1W2PRY6 76 aa7.3□□□□□ -1.24
GTF2A1-203ENST00000553612 CRYGBP07316 175 aa7.3□□□□□ -1.24
GTF2A1-203ENST00000553612 RPL39P5Q59GN2 51 aa7.3□□□□□ -1.24
GTF2A1-203ENST00000553612 TRAV12-1A0A0B4J245 112 aa7.3□□□□□ -1.24
GTF2A1-203ENST00000553612 BRCA1P38398 1863 aaKnown RBP7.3□□□□□ -1.24
GTF2A1-203ENST00000553612 WNT9BO14905 357 aa7.3□□□□□ -1.24
GTF2A1-203ENST00000553612 SAA1P0DJI8 122 aaPredicted RBP7.3□□□□□ -1.24
GTF2A1-203ENST00000553612 DLL3Q9NYJ7 618 aa7.3□□□□□ -1.24
GTF2A1-203ENST00000553612 MARF1Q9Y4F3 1742 aaKnown RBP7.3□□□□□ -1.24
GTF2A1-203ENST00000553612 IGKV3OR2-268A0A0C4DH90 116 aa7.3□□□□□ -1.24
GTF2A1-203ENST00000553612 PEBP1P30086 187 aaKnown RBP7.3□□□□□ -1.24
GTF2A1-203ENST00000553612 C1orf53Q5VUE5 145 aa7.3□□□□□ -1.24
GTF2A1-203ENST00000553612 MPV17P39210 176 aa7.29□□□□□ -1.24
GTF2A1-203ENST00000553612 DSCR4P56555 118 aaPredicted RBP7.29□□□□□ -1.24
GTF2A1-203ENST00000553612 FAM74A4Q5TZK3 123 aa7.29□□□□□ -1.24
GTF2A1-203ENST00000553612 SCN10AQ9Y5Y9 1956 aa7.29□□□□□ -1.24
GTF2A1-203ENST00000553612 ZIC1Q15915 447 aa7.29□□□□□ -1.24
GTF2A1-203ENST00000553612 CR1LQ2VPA4 569 aa7.29□□□□□ -1.24
GTF2A1-203ENST00000553612 PRO1854Q9UHT4 67 aa7.29□□□□□ -1.24
GTF2A1-203ENST00000553612 FRMPD3Q5JV73 1810 aa7.29□□□□□ -1.24
GTF2A1-203ENST00000553612 IGKV1-9A0A0C4DH69 117 aa7.29□□□□□ -1.24
GTF2A1-203ENST00000553612 SH2D1AO60880 128 aa7.29□□□□□ -1.24
GTF2A1-203ENST00000553612 COL4A1P02462 1669 aa7.29□□□□□ -1.24
GTF2A1-203ENST00000553612 TIMM23O14925 209 aa7.29□□□□□ -1.24
GTF2A1-203ENST00000553612 IGHV3-23P01764 117 aa7.29□□□□□ -1.24
GTF2A1-203ENST00000553612 TIMM17BO60830 172 aa7.29□□□□□ -1.24
GTF2A1-203ENST00000553612 Q6ZRM9 215 aa7.29□□□□□ -1.24
GTF2A1-203ENST00000553612 MRPL35Q9NZE8 188 aaKnown RBP7.29□□□□□ -1.24
GTF2A1-203ENST00000553612 CT83Q5H943 113 aa7.28□□□□□ -1.24
GTF2A1-203ENST00000553612 C20orf197Q8N268 126 aa7.28□□□□□ -1.24
GTF2A1-203ENST00000553612 MOB4Q9Y3A3 225 aa7.28□□□□□ -1.24
GTF2A1-203ENST00000553612 NDUFS7O75251 213 aa7.28□□□□□ -1.24
GTF2A1-203ENST00000553612 PMAIP1Q13794 54 aa7.28□□□□□ -1.24
GTF2A1-203ENST00000553612 TSC2P49815 1807 aa7.28□□□□□ -1.24
GTF2A1-203ENST00000553612 LTBP3Q9NS15 1303 aa7.28□□□□□ -1.24
GTF2A1-203ENST00000553612 NBL1P41271 181 aa7.28□□□□□ -1.24
GTF2A1-203ENST00000553612 ZNF658BQ4V348 819 aaPredicted RBP7.28□□□□□ -1.24
GTF2A1-203ENST00000553612 KHDC1LQ5JSQ8 128 aa7.28□□□□□ -1.24
GTF2A1-203ENST00000553612 IGFBPL1Q8WX77 278 aa7.28□□□□□ -1.24
GTF2A1-203ENST00000553612 DCTN5Q9BTE1 182 aa7.28□□□□□ -1.24
GTF2A1-203ENST00000553612 TRBV19A0A075B6N1 114 aa7.28□□□□□ -1.24
GTF2A1-203ENST00000553612 MS4A18H0YCH9 400 aa7.28□□□□□ -1.24
GTF2A1-203ENST00000553612 M0R381 172 aa7.28□□□□□ -1.24
GTF2A1-203ENST00000553612 ARMS2P0C7Q2 107 aa7.28□□□□□ -1.24
GTF2A1-203ENST00000553612 RUNX3Q13761 415 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms