RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 IGKV1D-37A0A075B6S9 117 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 IGHV4OR15-8A0A075B7B6 117 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 IGKV1OR2-108A0A075B7D4 117 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 A0A087WW49 117 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 A0A0A0MQY5 61 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 BORCS7-ASMTA0A0B4J1R7 106 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 IGHV3-21A0A0B4J1V1 117 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 SMCO3A2RU48 225 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 PPP5D1E7EU14 171 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 SMLR1H3BR10 107 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 IFNA5P01569 189 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 TRBV12-3P01733 135 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 IGHV3-23P01764 117 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 S100A7P31151 101 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 EIF5AP63241 154 aaKnown RBP4.36□□□□□ -1.71
SCAF11-213ENST00000550629 CLINT1Q14677 625 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 DEFB136Q30KP8 78 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 BTNL8Q6UX41 500 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 C18orf65Q6ZTR6 163 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 ZNF709Q8N972 641 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 WFDC9Q8NEX5 89 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 BPIFCQ8NFQ6 507 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 OR11H4Q8NGC9 324 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 OR51G1Q8NGK1 321 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 SCGB1C1Q8TD33 95 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 TMEM190Q8WZ59 177 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 MARC2Q969Z3 335 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 PPP1R14BQ96C90 147 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 GNPNAT1Q96EK6 184 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-213ENST00000550629 GINS3Q9BRX5 216 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 WDR61Q9GZS3 305 aaKnown RBP4.36□□□□□ -1.71
SCAF11-213ENST00000550629 DAZ1Q9NQZ3 744 aaKnown RBP4.36□□□□□ -1.71
SCAF11-213ENST00000550629 SIGLEC8Q9NYZ4 499 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 FBXL17Q9UF56 701 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 RNF24Q9Y225 148 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 UFC1Q9Y3C8 167 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 S4R3C0 116 aa4.36□□□□□ -1.71
SCAF11-213ENST00000550629 PKD1L1Q8TDX9 2849 aa4.35□□□□□ -1.71
SCAF11-213ENST00000550629 UBE2L5PA0A1B0GUS4 154 aa4.35□□□□□ -1.71
SCAF11-213ENST00000550629 WI2-2373I1.2A0A1W2PRP0 233 aa4.35□□□□□ -1.71
SCAF11-213ENST00000550629 C17orf112F2Z3M2 114 aa4.35□□□□□ -1.71
SCAF11-213ENST00000550629 AGPAT2O15120 278 aa4.35□□□□□ -1.71
SCAF11-213ENST00000550629 BCL2L11O43521 198 aa4.35□□□□□ -1.71
SCAF11-213ENST00000550629 CD5P06127 495 aa4.35□□□□□ -1.71
SCAF11-213ENST00000550629 CXCL2P19875 107 aa4.35□□□□□ -1.71
SCAF11-213ENST00000550629 FGF7P21781 194 aa4.35□□□□□ -1.71
SCAF11-213ENST00000550629 BMI1P35226 326 aa4.35□□□□□ -1.71
SCAF11-213ENST00000550629 RPL29P47914 159 aaKnown RBP4.35□□□□□ -1.71
SCAF11-213ENST00000550629 CAMLGP49069 296 aa4.35□□□□□ -1.71
SCAF11-213ENST00000550629 INSL3P51460 131 aa4.35□□□□□ -1.71
SCAF11-213ENST00000550629 PLP1P60201 277 aa4.35□□□□□ -1.71
SCAF11-213ENST00000550629 ZNF90Q03938 601 aa4.35□□□□□ -1.71
SCAF11-213ENST00000550629 TIGITQ495A1 244 aa4.35□□□□□ -1.71
SCAF11-213ENST00000550629 TOMM20LQ6UXN7 152 aa4.35□□□□□ -1.71
SCAF11-213ENST00000550629 CYP2G1PQ6ZSU1 146 aa4.35□□□□□ -1.71
SCAF11-213ENST00000550629 OR9G4Q8NGQ1 327 aa4.35□□□□□ -1.71
SCAF11-213ENST00000550629 ZNF414Q96IQ9 312 aa4.35□□□□□ -1.71
SCAF11-213ENST00000550629 MGST2Q99735 147 aa4.35□□□□□ -1.71
SCAF11-213ENST00000550629 ARPC5LQ9BPX5 153 aa4.35□□□□□ -1.71
SCAF11-213ENST00000550629 PSMG3Q9BT73 122 aaPredicted RBP4.35□□□□□ -1.71
SCAF11-213ENST00000550629 MCRIP2Q9BUT9 160 aaKnown RBP4.35□□□□□ -1.71
SCAF11-213ENST00000550629 NPCDR1Q9BY65 106 aa4.35□□□□□ -1.71
SCAF11-213ENST00000550629 GPR61Q9BZJ8 451 aa4.35□□□□□ -1.71
SCAF11-213ENST00000550629 PEMTQ9UBM1 199 aa4.35□□□□□ -1.71
SCAF11-213ENST00000550629 TIMM9Q9Y5J7 89 aa4.35□□□□□ -1.71
SCAF11-213ENST00000550629 PUS1Q9Y606 427 aaKnown RBP eCLIP4.35□□□□□ -1.71
SCAF11-213ENST00000550629 KANTRA0A1W2PQU2 76 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 ZNF320A2RRD8 509 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 OVOL1O14753 267 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 HYPMO75409 117 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 YIF1AO95070 293 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 IL4P05112 153 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 LINC00869P0C866 280 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 C8orf88P0DMB2 117 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 NPPCP23582 126 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 CRYBB3P26998 211 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 EIF2B2P49770 351 aaKnown RBP4.34□□□□□ -1.71
SCAF11-213ENST00000550629 SYNJ2BPP57105 145 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 SERF2P84101 59 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 CD300CQ08708 224 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 OPCMLQ14982 345 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 C1orf194Q5T5A4 169 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 EIF5AL1Q6IS14 154 aaKnown RBP4.34□□□□□ -1.71
SCAF11-213ENST00000550629 UNQ9165/PRO28630Q6UXU0 137 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 Q6ZRG5 221 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 TMUB2Q71RG4 321 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 C9orf62Q8N4C0 152 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 OR2G3Q8NGZ4 309 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 STOML3Q8TAV4 291 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 DLX4Q92988 240 aaPredicted RBP4.34□□□□□ -1.71
SCAF11-213ENST00000550629 RNF125Q96EQ8 232 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 NARS2Q96I59 477 aaKnown RBP4.34□□□□□ -1.71
SCAF11-213ENST00000550629 DUX3Q96PT4 197 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 METTL26Q96S19 204 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 PFDN5Q99471 154 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 GGTLC1Q9BX51 225 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 SMIM3Q9BZL3 60 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 ARL6Q9H0F7 186 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 ARV1Q9H2C2 271 aa4.34□□□□□ -1.71
SCAF11-213ENST00000550629 TMEM231Q9H6L2 316 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms