RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 SPATA3Q8NHX4 192 aa10.56□□□□□ -0.72
CALCOCO1-214ENST00000549613 WFDC12Q8WWY7 111 aa10.56□□□□□ -0.72
CALCOCO1-214ENST00000549613 METTL26Q96S19 204 aa10.56□□□□□ -0.72
CALCOCO1-214ENST00000549613 IGHV3-35A0A0C4DH35 117 aa10.55□□□□□ -0.72
CALCOCO1-214ENST00000549613 LGALS1P09382 135 aaKnown RBP10.55□□□□□ -0.72
CALCOCO1-214ENST00000549613 PYYP10082 97 aa10.55□□□□□ -0.72
CALCOCO1-214ENST00000549613 FAM106AQ4KMX7 169 aa10.55□□□□□ -0.72
CALCOCO1-214ENST00000549613 FAM74A3Q4VXF1 159 aa10.55□□□□□ -0.72
CALCOCO1-214ENST00000549613 SVBPQ8N300 66 aa10.55□□□□□ -0.72
CALCOCO1-214ENST00000549613 CYB561D1Q8N8Q1 229 aa10.55□□□□□ -0.72
CALCOCO1-214ENST00000549613 GPR82Q96P67 336 aa10.55□□□□□ -0.72
CALCOCO1-214ENST00000549613 C20orf24Q9BUV8 137 aa10.55□□□□□ -0.72
CALCOCO1-214ENST00000549613 TRBV12-3P01733 135 aa10.54□□□□□ -0.72
CALCOCO1-214ENST00000549613 GP9P14770 177 aa10.54□□□□□ -0.72
CALCOCO1-214ENST00000549613 CDX1P47902 265 aaPredicted RBP10.54□□□□□ -0.72
CALCOCO1-214ENST00000549613 ATP5G3P48201 142 aa10.54□□□□□ -0.72
CALCOCO1-214ENST00000549613 CEBPGP53567 150 aa10.54□□□□□ -0.72
CALCOCO1-214ENST00000549613 C1orf194Q5T5A4 169 aa10.54□□□□□ -0.72
CALCOCO1-214ENST00000549613 LEMD1Q68G75 181 aa10.54□□□□□ -0.72
CALCOCO1-214ENST00000549613 GPHB5Q86YW7 130 aa10.54□□□□□ -0.72
CALCOCO1-214ENST00000549613 OR8I2Q8N0Y5 310 aa10.54□□□□□ -0.72
CALCOCO1-214ENST00000549613 ZNF414Q96IQ9 312 aa10.54□□□□□ -0.72
CALCOCO1-214ENST00000549613 YTHDF2Q9Y5A9 579 aaKnown RBP10.54□□□□□ -0.72
CALCOCO1-214ENST00000549613 A0A1W2PS18 150 aa10.53□□□□□ -0.72
CALCOCO1-214ENST00000549613 K7EMT4 169 aa10.53□□□□□ -0.72
CALCOCO1-214ENST00000549613 SNAPINO95295 136 aa10.53□□□□□ -0.72
CALCOCO1-214ENST00000549613 ADCYAP1P18509 176 aa10.53□□□□□ -0.72
CALCOCO1-214ENST00000549613 CRYBB3P26998 211 aa10.53□□□□□ -0.72
CALCOCO1-214ENST00000549613 OR5B12Q96R08 314 aa10.53□□□□□ -0.72
CALCOCO1-214ENST00000549613 TCEAL7Q9BRU2 100 aa10.53□□□□□ -0.72
CALCOCO1-214ENST00000549613 U3KQE9 123 aa10.53□□□□□ -0.72
CALCOCO1-214ENST00000549613 BUB3O43684 328 aa10.52□□□□□ -0.73
CALCOCO1-214ENST00000549613 SUMO1P63165 101 aaKnown RBP10.52□□□□□ -0.73
CALCOCO1-214ENST00000549613 FAM90A2PQ658T7 463 aa10.52□□□□□ -0.73
CALCOCO1-214ENST00000549613 CCDC28AQ8IWP9 274 aa10.52□□□□□ -0.73
CALCOCO1-214ENST00000549613 LYPD1Q8N2G4 141 aa10.52□□□□□ -0.73
CALCOCO1-214ENST00000549613 LINC01006Q8NI28 216 aa10.52□□□□□ -0.73
CALCOCO1-214ENST00000549613 BLNKQ8WV28 456 aa10.52□□□□□ -0.73
CALCOCO1-214ENST00000549613 RPUSD4Q96CM3 377 aaKnown RBP10.52□□□□□ -0.73
CALCOCO1-214ENST00000549613 GRAMD2BQ96HH9 432 aa10.52□□□□□ -0.73
CALCOCO1-214ENST00000549613 UFC1Q9Y3C8 167 aa10.52□□□□□ -0.73
CALCOCO1-214ENST00000549613 ZNF320A2RRD8 509 aa10.51□□□□□ -0.73
CALCOCO1-214ENST00000549613 CLPSL1A2RUU4 121 aa10.51□□□□□ -0.73
CALCOCO1-214ENST00000549613 ZNF727A8MUV8 499 aa10.51□□□□□ -0.73
CALCOCO1-214ENST00000549613 MRPS12O15235 138 aaKnown RBP10.51□□□□□ -0.73
CALCOCO1-214ENST00000549613 IGLC2P0DOY2 106 aa10.51□□□□□ -0.73
CALCOCO1-214ENST00000549613 ATF4P18848 351 aaPredicted RBP10.51□□□□□ -0.73
CALCOCO1-214ENST00000549613 BMI1P35226 326 aa10.51□□□□□ -0.73
CALCOCO1-214ENST00000549613 GALR1P47211 349 aa10.51□□□□□ -0.73
CALCOCO1-214ENST00000549613 RANP62826 216 aaKnown RBP10.51□□□□□ -0.73
CALCOCO1-214ENST00000549613 PDE6HQ13956 83 aa10.51□□□□□ -0.73
CALCOCO1-214ENST00000549613 RPEL1Q2QD12 228 aa10.51□□□□□ -0.73
CALCOCO1-214ENST00000549613 C11orf52Q96A22 123 aa10.51□□□□□ -0.73
CALCOCO1-214ENST00000549613 NIPSNAP3BQ9BS92 247 aa10.51□□□□□ -0.73
CALCOCO1-214ENST00000549613 OTORQ9NRC9 128 aa10.51□□□□□ -0.73
CALCOCO1-214ENST00000549613 ZNF586Q9NXT0 402 aa10.51□□□□□ -0.73
CALCOCO1-214ENST00000549613 TRBV19A0A075B6N1 114 aa10.5□□□□□ -0.73
CALCOCO1-214ENST00000549613 IGHV3OR16-8A0A075B7F1 116 aa10.5□□□□□ -0.73
CALCOCO1-214ENST00000549613 PGPA6NDG6 321 aa10.5□□□□□ -0.73
CALCOCO1-214ENST00000549613 ZNF785A8K8V0 405 aa10.5□□□□□ -0.73
CALCOCO1-214ENST00000549613 H3BQ15 152 aa10.5□□□□□ -0.73
CALCOCO1-214ENST00000549613 MEOX2P50222 304 aa10.5□□□□□ -0.73
CALCOCO1-214ENST00000549613 PSG9Q00887 426 aa10.5□□□□□ -0.73
CALCOCO1-214ENST00000549613 GUCA2BQ16661 112 aa10.5□□□□□ -0.73
CALCOCO1-214ENST00000549613 TMEM241Q24JQ0 296 aa10.5□□□□□ -0.73
CALCOCO1-214ENST00000549613 WIPF2Q8TF74 440 aaPredicted RBP10.5□□□□□ -0.73
CALCOCO1-214ENST00000549613 C4orf3Q8WVX3 66 aa10.5□□□□□ -0.73
CALCOCO1-214ENST00000549613 DPF1Q92782 380 aa10.5□□□□□ -0.73
CALCOCO1-214ENST00000549613 TVP23CQ96ET8 276 aa10.5□□□□□ -0.73
CALCOCO1-214ENST00000549613 SMIM7Q9BQ49 75 aa10.5□□□□□ -0.73
CALCOCO1-214ENST00000549613 LGALS9O00182 355 aa10.49□□□□□ -0.73
CALCOCO1-214ENST00000549613 ZNF253O75346 499 aa10.49□□□□□ -0.73
CALCOCO1-214ENST00000549613 NDUFB4O95168 129 aa10.49□□□□□ -0.73
CALCOCO1-214ENST00000549613 MYCNOSP40205 109 aa10.49□□□□□ -0.73
CALCOCO1-214ENST00000549613 PNRC1Q12796 327 aaPredicted RBP10.49□□□□□ -0.73
CALCOCO1-214ENST00000549613 ZNF674Q2M3X9 581 aa10.49□□□□□ -0.73
CALCOCO1-214ENST00000549613 KHDC1LQ5JSQ8 128 aa10.49□□□□□ -0.73
CALCOCO1-214ENST00000549613 C16orf54Q6UWD8 224 aa10.49□□□□□ -0.73
CALCOCO1-214ENST00000549613 UNQ9165/PRO28630Q6UXU0 137 aa10.49□□□□□ -0.73
CALCOCO1-214ENST00000549613 REC114Q7Z4M0 266 aa10.49□□□□□ -0.73
CALCOCO1-214ENST00000549613 CLRN3Q8NCR9 226 aa10.49□□□□□ -0.73
CALCOCO1-214ENST00000549613 HIST1H2BAQ96A08 127 aa10.49□□□□□ -0.73
CALCOCO1-214ENST00000549613 ELOVL1Q9BW60 279 aa10.49□□□□□ -0.73
CALCOCO1-214ENST00000549613 PARLQ9H300 379 aa10.49□□□□□ -0.73
CALCOCO1-214ENST00000549613 Q9H3A6 140 aa10.49□□□□□ -0.73
CALCOCO1-214ENST00000549613 DAZ1Q9NQZ3 744 aaKnown RBP10.49□□□□□ -0.73
CALCOCO1-214ENST00000549613 NAT8Q9UHE5 227 aa10.49□□□□□ -0.73
CALCOCO1-214ENST00000549613 RNF114Q9Y508 228 aa10.49□□□□□ -0.73
CALCOCO1-214ENST00000549613 MXRA5Q9NR99 2828 aa10.49□□□□□ -0.73
CALCOCO1-214ENST00000549613 IGHV4OR15-8A0A075B7B6 117 aa10.48□□□□□ -0.73
CALCOCO1-214ENST00000549613 A0A087WW49 117 aa10.48□□□□□ -0.73
CALCOCO1-214ENST00000549613 A0A087X0K7 114 aa10.48□□□□□ -0.73
CALCOCO1-214ENST00000549613 IGHV7-4-1A0A0J9YVY3 117 aa10.48□□□□□ -0.73
CALCOCO1-214ENST00000549613 A0A1B0GUS0 222 aa10.48□□□□□ -0.73
CALCOCO1-214ENST00000549613 SCO2A0A1W2PP80 73 aa10.48□□□□□ -0.73
CALCOCO1-214ENST00000549613 GGTLC3B5MD39 225 aa10.48□□□□□ -0.73
CALCOCO1-214ENST00000549613 ZNF207O43670 478 aaKnown RBP10.48□□□□□ -0.73
CALCOCO1-214ENST00000549613 SLC25A5P05141 298 aaKnown RBP10.48□□□□□ -0.73
CALCOCO1-214ENST00000549613 S100A9P06702 114 aaKnown RBP10.48□□□□□ -0.73
CALCOCO1-214ENST00000549613 TCTEX1D4Q5JR98 221 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms